Cucsat.G10449 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10449
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Glycine-rich RNA-binding protein RZ1C-like isoform X1
Location	ctg1678: 385408 .. 390634 (-)
RNA-Seq Expression	Cucsat.G10449
Synteny	Cucsat.G10449

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGGTAGCAAATTTACTGGGTGCTTTTCGTTTTCGCCGATTTTTTTTCTAAAATTTTGCTTCTATTTCTCAAATTACCTTTTGGGTTTTTGCTGTGCAGGAGGATATTTTCCCCCCGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGCGGTTTGTCATGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGGTTACCCTTATTTATATATATTCGTTGATTTGTAGTTTGATCTTTATTGAACGCATTGGACTTTGTCTAAACTGAACACATGGGAATAAGTTGTTCATTTTTATCTTATAGGTGAAGGAAATAGTGGAAATTGTAAAATGGGTGTCATTCCGTGCTAATGTTCATATGAAGAATATAATTTGTAAATTTACACTCCTTTTCCAAAAACACTGCAGATGAACTGCAAGATTAACTTTTACCATCTGAAGCCATTATTTTTTTGTTTTGTTTTGTTTTCTCAGTATTGTTTTATGATTACCATAATTTTTTCTTCTCCATCCTCCTCTTCCTGATGACGTTTCTTTTTCCCTTGTGAATGAGGACGCTGTTAATGAAATTTTTGGGAAGCGGTTTCACTATCCATGTAAAGTTGAATGCATCAAGATGCTGAAGGTCATAGGGTTGTTTGCGCTTAAGTATAATTTGATTTAGATCTGCTGGTTAAGAAAATGTGCTACCATCTGGATATTGGGAATATGGTTGCCTGCTAACTCACTCAATCTTGTGGTCTAGCTGATTGGGGTTTGGTAGGATTTTAATATGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCTTGATTTAAACCAGAGGAACTATTAACAAGTGATGTGCTGATGCCTGCTCGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTTGATGAGGAAACTGAAGCCACTAAAATGTTTCAGGATCCGACTAATAAATGTTCTAGTATTTTCATGGGGAATTTTATCTTGCTCTGGATGATTATTAAGCCCAACTTATTTTTGGGTTACCCTTCTTATCAATGGTACAGCCAAAAGTTAATGAAGAAGTTTATGTGGTTTACGAGATGTTGCGTGGGGCAGAAAGTCTGGGCTAGATTGCTATATTGACTCAGATAATGAGTTTGCTAAGTCAAATAATCTCAGAAAGTTTTCAGAAGCCATATCTCATAGATGGAATGTTTTGTTGTACGAAGTACTGTCTGCCTCTTTGTAATGCTTTCTTCGCGTTCCTGTTCGTGACTAATTACTATTCAAGTGAGAGATAGCTGGTTTCTCATTTGCTACTTTCACTGGAGTTGAGAGTTGTCAGTTTGATTTAAGATGAAGAAGAAAATGTAGAAGTGGTGCATGTGTTATGGCTAAGATTTATGATAGCATGCAAAGGTACAGTTTGGGACATCAATAACCATTTCATTCTTTTGAGTGGACACTGCATCTTTGAATTTCATTTTTCTGTGATGAAGTTGCCAGAGTACCCTACATTTCCGAGCATGCTCAGAAAGTTATTTGTACTGGTTTCTGTTTAGCAGCTTATGTGGCTAGAAATTGTACTAGTGATGCCAGGCTTAGCAGCTCAGACATTTTCTGAAGAATCGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGGATCCTCCTTGTATGATGTCAGCTGAATTTTAAATGTCTGCTTGAGGACCTTTTCTGATCAGTTGTTATCTTTGTTGGTGAGCTTGTTAAGTAATGTGTGATGGACCGGACCCTGGACAATGATGTCGATATTATTGCCATCTAAAAGTTCCAGAGTTCTTAGGCCCTCAGTTTTCTGTTATGTCCGAGCATTATGAATGTCTATTTGTCGGGTATAGTACTGCAGTCTGCAAGAGAGCAATTGGATCTGAAGCTAAATTTGAGTTCCGTAGGTGCAGTGGTAGTTCCTATTTAGAGGAATGGGTTTAGGTTGTGGCAACGTGAGAAATTATGGAGCTGTAGTTTTTCATTCCTTTGTTTGCATCCTTTTCCTGTTGTTTGGAGTCGTTTCTCAAGATTTGCCAAGAATGCTGCTGTTCTGTTTTCCTTTTCTGTGGTGTTGATGTGCTAGTTTACTCATTTTATACTCATTGACAGTCTTTGTCTTAGCAAAGTTTGAATTCATCGATTTTTGAATCTATTTAAACTTAAGAGGGGTTGAATATGAATATGTGCCTAGTTAAGTATGGTTGCCACGCAAGAAGTTTTGTTGTTGTCAAATTTTCTAATACAGCCTCTTGTCCACGAATTCTGTGGTTGCTATGCAAGTTGGTCATCAAGTTTTCTAGTACAGCCTCTTGTGTCCACAAGCTGATGGGATCTCTATTGCAGAATAAGTTGGCATCTCAATTGCCTGAAATTTTGCTGTGTCTTCTTGCCTGCGTTTCCTTGACCATTCATCCTGGAAGATATGTTGTTCAAGGATTCATCTTTCTTTTTTGAGATTTATTCCACCATCTACTTCACATCACGTCCCAATATGATCATTTGACAACAACATTGAGGTTAACAAATCACCTAGTTGGAGTAATACACAAATCAAATGAAGTGTTTGTAGTGGGCTTTTTTTTTAGTTAAGATTGACTTTGAGTACCATTTTCGGATGGCTGACTGCTCAGAAGAAGGCCATGTAGCCATGTTTTTATGGCATTGTTTCTTTTGAATAAAAGGCGACTAGAGATGTAAGATACTCTCACTTCAGAAGATAGACCTAAAGATGTGCAGGTGCTTTTGTTTTGTTAAGGAATTATGTAACATGTTGCCATGAGTTCATAAACGGAAGAAAAAGTAAGTTGTCAGACTTTTAAAAACATTTTTATGGTGTTATTATCAATTACTTTGAACGAGTTCTCTTTGATGTTGTACTCTTTTTTATTGTGTATACAGCATGTGATAGGCTAAACTTCATCACCTGCTTGTACCCATAACTTATTCTGTTATTCTGCTTCTCTAATGGAGTGTAGGTTTGTTAACCATGTGTCCTGAATGATAATTTGATGGAGTTTTAACCTCTATTTTTAGTAGTTGTTGGAGTTTGAAATCTCTAGATTATGGTAACTGTTTGGTATTGAATCTATATCTATAACTTGCAACTTTGTCACAATTCTACTTATGGGCTTCAAGCCCAATATTGGGTATAGTTTTCCATGCTTTTAGATTAACCTTATGACCACTCCAAATTTTTATGGGCTATGAACTGGGATCTTAAGTACCACACCTTATATTGGTGGTCAGGTTGTAGAGTTTATCTTGAAGCCTGTCATCTTTCAACATTGAGGAGGTGGGATCTCTGGGCTATTTGTTTATCTTTAACTGTGGTGGTCTTCGTCCCTGTTTCTTTGATGCTAGTTTTTGTTACATTGGACAAATTCACTTTATAATCTAGGGTTAGACTATAGTGATGGCTAGCAGGTTTCTAGTTTTCACTTAGTATACCTTATTAGCGTGGGATGTACTTTAGTAGCTCTGTTCTAATGACTTCATTTAAGTTTTATTGGCTATTCAATTGATTTTCTCTTTGGCATTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGCGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGACGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCGACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGTGGGGATCGCTTTGCTGGAGATGCTAATCGTTATGTGGATGATCGTTATGATGGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGCAGGGACAACAAATATGGCAGTCGTGATCGCTATGTTAGTGATAGGTACTGACTGATTTTTTTCTGTGGATTTTTAGGGTATTATTTGTTCGTTTAAAGTAATTATGACTAGGAAATAATAATTGGCAGAATAACGATCCAATATTATATTGTTCTTTTTGTTGATTAATTGATGGCTGCTCAATTGTTTTCGTTGCAGCATATCATGTAGTTAACCAATCTCATTCCTGATTTTTTGCATAAATCTGGCAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATACTAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGACAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAACCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTTATTGTTAACACATTATCAGATTTATCAAAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGCAGTACCGATGCCTGACTGAGACAGATTGTTCCTGTGTTGTGTAGTTTTAACTAGAGTTTTTTTGCTCAGAGAGACAGATAAATGCTCTAAAGAACGATGAATGGAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTTCTAAAATGTCGAGGCAAATCTCGAACGGAAGGGACTCTTAAGGCTTTGATTCATAGTTCATAAACAAATTAGCAAAGATACAACTAGAGAGGCCAGTAGCACCATATTCGTGTATTGAGCAGAGGTATGATGATGGACGAAAATATGAGACAAAGCTGGAAAATTGGCTTCCCAAAGAACGAACTCTACGGCTGTTGGGAAGAAATATTGGTTTGGGCTTCAATTGGAATTACTTTTTTTTTGCTTTCTCCCTTTCTTTTTTCTGAACGTTTCTTCCGATTTTATGTTACTGATTCTCTTGAACTTTAGGAAAATGAGAAAGGAAAATGGGCACATTTTGAGTGCTCGATTCTATATTTCTTCCACCAACGTGTTTTTCTCCTTTTAATTCAATAATAGATTTTTCATCCTAGAGATCCTAGAGATG

Coding sequence (CDS)

ATGGCCGGAAGAGAAGAGTACCGAATATTTGTGGGCGGTTTGTCATGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGCGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGACGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGGTACTCGACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGGAGATAGATCTGCAAGGCAAGATGAGTGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGATTCATTTCTTGCACGTTCTCGGCTTGGTGATAGTGATCGTGGGGATCGCTTTGCTGGAGATGCTAATCGTTATGTGGATGATCGTTATGATGGTGGTGGGCGCTTTGGAGATAGAGATCGCTTTGATAGCAGCAGCAGGGACAACAAATATGGCAGTCGTGATCGCTATGTTAGTGATAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATACTAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGACAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAACCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY

Homology

[Close]

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.0e-79
Identity = 177/313 (56.55%), Postives = 213/313 (68.05%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGD 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGG 
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 ANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYTNDSDR 240
             RY+DDRYDG  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPNRGG- 287
           +P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RP+R G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-71
Identity = 160/300 (53.33%), Postives = 196/300 (65.33%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQD 122
           DAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS+ G+G+            +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT------------ED 127

Query: 123 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSD-RGDRFAG-----------DA 182
           ECFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + 
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREF 187

Query: 183 NRYVDDRYD-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRF 242
           +RY+D R D  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY       
Sbjct: 188 DRYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPNR-GGRPSSFDRY 287
                G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRP+R GGRPSS++R+
Sbjct: 248 ENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 112/295 (37.97%), Postives = 158/295 (53.56%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGD 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY        GG GGGD
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDRDRSRPSGGRGGGD 120

Query: 121 RSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDD 180
                  CFKCG+ GH+AR+CPS                   +S R              
Sbjct: 121 -------CFKCGKPGHFARECPS-------------------ESSR-------------- 180

Query: 181 RYDGGGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS--SRYTNDSDRFPVNG 240
             DGGGRF  + DR+  SS+D++YG++D    DRY    DR+G+   RY++  DR+    
Sbjct: 181 --DGGGRFSSKDDRY--SSKDDRYGAKD----DRYGAKEDRYGAKDDRYSSKDDRYSSK- 240

Query: 241 YGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPNRGG 279
              DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Sbjct: 241 --DDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGAPGGERHSRAPYDRPRAGG 243

[Close]

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +R LE AF+++G+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYR--GGGYSTGGRGSYGGGGGGDRSARQDEC 125
             M+GQ+   R I+VN+A+ + G     G R  GGGY +GG G YGGGGGG     ++  
Sbjct: 67  EGMNGQDLDGRSITVNEAQSR-GSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGG 126

Query: 126 FKCGRLGHWARDCPSVGGGRGRGG 148
           +  G  G+ +R     GGG G GG
Sbjct: 127 YSGGGGGYSSRG----GGGGGYGG 145

[Close]

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 76/179 (42.46%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   + +LE  F++FG++IDS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQDECFK 125
            EM+G+E   R I+VN+A+ + G     G  GGGY   G G YGGGGGG    R    + 
Sbjct: 65  DEMNGKELDGRTITVNEAQSR-GGGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRGGGGYG 124

Query: 126 CGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGGGRFG 185
            G  G       S GGG G GG         G  D G    GD        Y GG   G
Sbjct: 125 SGGGGRGGGGYGSGGGGYGGGG---------GRRDGGGYGGGDGG------YGGGSGGG 167

[Close]

BLAST of Cucsat.G10449 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus])

HSP 1 Score: 587 bits (1512), Expect = 1.58e-211
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286

[Close]

BLAST of Cucsat.G10449 vs. NCBI nr
Match: KAE8648851.1 (hypothetical protein Csa_008374 [Cucumis sativus])

HSP 1 Score: 587 bits (1512), Expect = 4.73e-205
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 424 MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 483

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ
Sbjct: 484 MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 543

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG
Sbjct: 544 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 603

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY
Sbjct: 604 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 663

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY
Sbjct: 664 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 709

[Close]

BLAST of Cucsat.G10449 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 570 bits (1468), Expect = 8.38e-205
Identity = 279/287 (97.21%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGG-DRSAR 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGG DRSAR
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSAR 120

Query: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDG 180
           QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLAR+RLGDSDRGDRFAGD NRYVDDRY+G
Sbjct: 121 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYEG 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGY 240
           GGRFGDRDRFDSSSRDNKYGSRDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGY
Sbjct: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGY 240

Query: 241 YRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           YRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 YRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSSFDRY 287

[Close]

BLAST of Cucsat.G10449 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1454), Expect = 1.02e-202
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of Cucsat.G10449 vs. NCBI nr
Match: XP_022956605.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 518 bits (1334), Expect = 1.19e-184
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.94e-203
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.94e-203
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 5.78e-185
Identity = 256/286 (89.51%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL
Match: A0A6J1KMD7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496986 PE=4 SV=1)

HSP 1 Score: 518 bits (1333), Expect = 8.21e-185
Identity = 255/286 (89.16%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYRGGG               DRSARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGG---------------DRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRY NDSDRFP+NGYGKDRGYY
Sbjct: 181 GRFGDRDRFDNS-RDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYY 240

Query: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286
           RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 270

[Close]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 515 bits (1326), Expect = 2.77e-183
Identity = 264/302 (87.42%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG   GGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGSS Y NDSDRFPVNGYGKDRGYY
Sbjct: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDG----------------GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFD 286
           RDG                GPRG+DKYGSGGPARDEGRSYRNRPAPYDRP+R GRPSSFD
Sbjct: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299

The following BLAST results are available for this feature:

BLAST of Cucsat.G10449 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWN5	3.0e-79	56.55	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE...	[more]
O22703	1.8e-71	53.33	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE...	[more]
Q9LIN3	1.5e-33	37.97	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE...	[more]
P49310	1.6e-24	46.53	Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]
Q05966	2.4e-23	42.46	Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1	[more]

BLAST of Cucsat.G10449 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142412.1	1.58e-211	100.00	glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869...	[more]
KAE8648851.1	4.73e-205	100.00	hypothetical protein Csa_008374 [Cucumis sativus]	[more]
XP_038892830.1	8.38e-205	97.21	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]	[more]
XP_008446829.1	1.02e-202	97.20	PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] ...	[more]
XP_022956605.1	1.19e-184	89.51	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cucsat.G10449 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGN5	4.94e-203	97.20	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3CG30	4.94e-203	97.20	Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1GY86	5.78e-185	89.51	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KMD7	8.21e-185	89.16	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CFE7	2.77e-183	87.42	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 84..100 e-value: 1.3E-5 score: 34.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 84..100 e-value: 1.9E-8 score: 34.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 85..100 score: 11.086722
None	No IPR available	GENE3D	4.10.60.10		coord: 80..108 e-value: 1.1E-8 score: 36.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..248
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 1..209
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..40 e-value: 2.8E-8 score: 33.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..47 score: 10.940072
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..79 e-value: 5.2E-15 score: 57.7
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 2..77
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 65..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10449.T8	Cucsat.G10449.T8	mRNA
Cucsat.G10449.T9	Cucsat.G10449.T9	mRNA
Cucsat.G10449.T2	Cucsat.G10449.T2	mRNA
Cucsat.G10449.T3	Cucsat.G10449.T3	mRNA
Cucsat.G10449.T1	Cucsat.G10449.T1	mRNA
Cucsat.G10449.T6	Cucsat.G10449.T6	mRNA
Cucsat.G10449.T7	Cucsat.G10449.T7	mRNA
Cucsat.G10449.T4	Cucsat.G10449.T4	mRNA
Cucsat.G10449.T5	Cucsat.G10449.T5	mRNA
Cucsat.G10449.T18	Cucsat.G10449.T18	mRNA
Cucsat.G10449.T14	Cucsat.G10449.T14	mRNA
Cucsat.G10449.T15	Cucsat.G10449.T15	mRNA
Cucsat.G10449.T16	Cucsat.G10449.T16	mRNA
Cucsat.G10449.T17	Cucsat.G10449.T17	mRNA
Cucsat.G10449.T10	Cucsat.G10449.T10	mRNA
Cucsat.G10449.T11	Cucsat.G10449.T11	mRNA
Cucsat.G10449.T12	Cucsat.G10449.T12	mRNA
Cucsat.G10449.T13	Cucsat.G10449.T13	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding