Cucsat.G10369 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G10369
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1675: 924992 .. 927964 (-)
RNA-Seq Expression	Cucsat.G10369
Synteny	Cucsat.G10369

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTCTTCTTCTTTGTCTTCTCTTCTTCTTTTTTTCTTCTTCTTTGTGGAAGACCACGCGTCGACCCTCATTCTCAATTTTTCCTCCCTTCCGCTAACCATTTCTCTCCCTCTCTCATTCATGTTAGGAACGACGCAACTTTTCGTCAACGACACACCCGAAATCCTCCTCTTTCTCTCCTTCAGCCAACGCCACCACCCAACACCTCTCGCACCGCTCAACTCACCGGTGAATCTCAACCATTATTTCTATTGTTTGTAGTTGTACGGTATATTAACTTAAAATGCTTTCATTTTACCACAATGTGATATATTGATAGGCTCTTTTTATGAAAAACATCCCTCATAGTTTTGCTTTTATAAGAGATATGTGTTTGTTTTGTCTACCATCTTAATATTGTTGTTTACGATCATTTTTCTAATGTGAATCTACATATTTTCTTTATGGTTGGCTATGTGATGGAGCATTTTGATAGCTTACAATATGTTTGATGAAATGCCTCAATGAAGCATTTGGTTGATTTTTAATTGATTTTTGTTCCTTCGAATTAAGAAATCAAGGCGAAGGGAGATTTTGTGGCTGTGGGCTGAAGCTTTGAGAAAAAGAGAATGAAAAATAAAGTATGAGATTTTAAACATTCATAATGTGTAGGGTCTTTTTGTTTGTTTATACATTTCCTAAGTGAATATGAGTACTTTTGATTTTTCTATTGATCTTTTGTTTACGGTTGCTATTGAGATGTATCGTAATTACATGATAGTTATAGCATAAACAAACTATATATATAAATTTGAACACAAGTACTTGTTATCTAACTCATTACTAAACTGTTGTAATTTGGTTACTCTTGATTTACTAGTGATTGAAGATTAAAAAAAGCTATGAACGTTTTCACTATGAGTAAGAAATAAACTCTTTATGTAATTAATAAACTTATCTTAATTTATAGGAAGCTTTGATAAACCATCAATTTAAGTAAGATTAAGAAACACAAAGAACAAAAGTAAAACCCAACACTTTTTCATAATGTAATATAATATAATGATAGTAAGAAGTACAAAGAATTAAGTTGGAGGGTTATACTCCTTTTACACCCATTTATATTGTCCACAATAACATCATATATGTGTGTAGAATATTTTGATTCCTATGCTTTCACTAGATAATAGAATATCTCCTCCAATTCAATGCTCCCTTTCAAATTTCTATGGAAGTTATTGCTGCTTTTTCTAGCTTTGTTTTGAGAAACTCCCTCTAACTACTAGAAAAATCATGGTGATTTCTAATTTTTGACTAAACATATTTAGAAACAAGAAAATAGAATAAGTATTAAGCAAAAATCTATTTCATTCAACTTTTGCAAGGATATTGTTTAGGGCTGGATTGGTATTGATTTCATTCTAATTTTCTGCTCATAATTTACTTGATACTTTTTCTTAAGCTCATAAGATGTAGAGATTTTTATTTATACGCTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTGTTGATTGGGAGGTTTTCTTTCCATACTGATATAATGAAATGTAAATTTAATTTTATTTGTAGGAAACTTATGTTTAGGGCATCAAAGAAGAAGTTGTTTTGTCCCTTGCTCATGCTCTTTCCTTGATAGCATTTGAAGAAAGTTAGAGTAGTATAAAGCTACTTTTAGCATTTGATCTATTGAAATGTACTAATTTTCTGGGTTGGTTATTTGTTGGGTTTATGATTCCTTAAATTGTGTCATTTTGATGGTTTCTTATTTCTGTTTTGGTTTCCACGTTGTACCTATTCAATACTTAATCATTTTGTTCATCAAACTCCATGCTCCAGTAACATAGAATCACACCATTAGCATAAATTCAAAGAAAGGAAAGCAGAAACTTAGTAGAATCATTAATACAGTAGTACTTAATTGTGTTCCTTAACCCACTTTCAGCATATTTATTTCGTAGACCATGAGTTTAATCCTATCATAATTGTGGTGTGGTGAATATTATTTATATTAGGTTTAAGCTTTGCTTATACAAAAATGCCCATCCATCTCCTAATCTCGATCCATTGGCCTATGTTGACAAATGTAGAGTTGTCATCATAAATAGTTAAATTTCTCTAAATCTATCATCAAGGATATAACTTGGATGTTTGAAGTCTTAGACGCTTTCTAAATTCTATCCTCTATTTAATTATTCTATAGGTGTTATTTAATTATATGTTCATACATTTAAATTTACAAACTTCAGTAATTTGGTTGGTTCTTTTACGCATATAATTCTGCTTTATGATATACATCAACAAGAATAGTGCTTATGCTTTCTTTTTTATCTTGTATCCTCCTAAAGGAAAAGAATGGAACTGATAGTCTTGCAGTTCAATTTGCGGATGAGAAGCACTTTGTTTATTTCTCATGTCTAGTTACAATTCTGTTTCTTCACTTAATAGGAAGTGCATAGCTAATTAGAGGGTATATGGAAGTTTCACTAACCATCTCATTTTGTTTATTTTTATGCAGTTTTACACATTTTTATGAAGGGTTGGGAGGGGGCTGAAAATGTTGTTACAGAAGTTTGGGCACTCTAGTTATTCTTCTATAATCTCAATATTGTTTTTTTTTTTCAATCTTACACCAATGGTAATATTCTTTAATTACCTTTAAATGGCTTTAAGTAGAATCTCCTCATAGGTAATGTTCTTGAATCATACTCTAAATGAGATTTTGTTTTCTTACTAGGTTTGGAAGAATCCATTTGGAGCATTGAAGCCAATTTGGAGCAATTGATTGATATAACATCTTTTGTATGGTTGGTAGCAAACACTTGCTTTCAATGTATTGATTTTAGGTTTCTTGCTTCCAATGTCAATGTATATTGTTTTTCTATGGAAACTACATTTGAACTAAACAAATGGTTATTAGTCAATATGGGTGTACAAATACTACAAAGTGTATCATTATGCATATATATAT

Coding sequence (CDS)

CTTCTTCTTCTCTTCTTCTTTGTCTTCTCTTCTTCTTTTTTTCTTCTTCTTTGTGGAAGACCACGCGTCGACCCTCATTCTCAATTTTTCCTCCCTTCCGCTAACCATTTCTCTCCCTCTCTCATTCATGTTAGGAACGACGCAACTTTTCGTCAACGACACACCCGAAATCCTCCTCTTTCTCTCCTTCAGCCAACGCCACCACCCAACACCTCTCGCACCGCTCAACTCACCGGTGAATCTCAACCATTATTTCTATTGTTTGTAGTTAAATCAAGGCGAAGGGAGATTTTGTGGCTGTGGGCTGAAGCTTTGAGAAAAAGAGAATGA

Protein sequence

LLLLFFFVFSSSFFLLLCGRPRVDPHSQFFLPSANHFSPSLIHVRNDATFRQRHTRNPPLSLLQPTPPPNTSRTAQLTGESQPLFLLFVVKSRRREILWLWAEALRKRE

Homology

[Close]

BLAST of Cucsat.G10369 vs. NCBI nr
Match: KAE8647267.1 (hypothetical protein Csa_018256 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 1.01e-21
Identity = 51/84 (60.71%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 31  LPSANHFSPSLIHVRNDATFRQRHTRNPPLSLLQPTPPPNTSRTAQLTGESQPLFLLF-- 90
           L  ANH SPSL HV ND TF +RH RNPPLSLLQPTPPPN   T +L  ESQ    +   
Sbjct: 19  LHPANHLSPSLTHVGNDVTFYRRHARNPPLSLLQPTPPPNIPSTVELDSESQSPCAIARW 78

Query: 91  ----VVKSRRREILWLWAEALRKR 108
                 KSR R+I WLWAEALRKR
Sbjct: 79  KSSSSWKSRPRDISWLWAEALRKR 102

The following BLAST results are available for this feature:

BLAST of Cucsat.G10369 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G10369 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647267.1	1.01e-21	60.71	hypothetical protein Csa_018256 [Cucumis sativus]	[more]

BLAST of Cucsat.G10369 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G10369.T4	Cucsat.G10369.T4	mRNA