Cucsat.G10165 (gene) Cucumber (B10) v3

Overview
NameCucsat.G10165
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description60S ribosomal protein L35
Locationctg1673: 6632442 .. 6633762 (+)
RNA-Seq ExpressionCucsat.G10165
SyntenyCucsat.G10165
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTAAAAGGGCAAATTTGGGAAATAAAATAATATACTTATAATAAGATAACCTTCTTCTCGTGCGCCAAAACCCTAGTTTTCTCAGTATCACCTCTTCCATCTCTTCTAGGGTTCCGCCGACTCGAAGACCGCACGATACGAAATGGGTACATTCTCAATCAAATCTTATCTTAATCTAGATCAGACATTTGAAATTTTTGTTATTCAATTTGCTGTTTCTGGTTTGTAGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCAGATCTCTTGTTGCAGCTTAAGGATCTTAAGGCTGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAATGTGATTCTCTTTTCCTTTTGAGTGTTTTTTAGTTCCGTAATGCATCTCATTGTTTTGTTTATCTTATTGTTCTATGCTTTTTTAAAAAAAAAAAAATTGCAGCAAGGTAGTGAGATTGTCGATAGCTCAAGTATTGACAGTAATTTCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTACCTCTTGATCTGCGCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAGGTAAATTGTTTCTTCTTTATCCGTCGTTTAATTTCAGTCCAAATTGATTTTGTATGTTCCTCGTTTAACTTTTTAATTGAATTTTATTACGGATTTTATGTGTAATTGTTGCCAATGTGAGATTTTCTACGATCCCTAGAAAAAAAGAATGGCGGAACTACTTGTTATTAATGGAAATGCTATCATTTTCATATATGAATTGTGGATGGGTTTGTTAGTTTAAATCATTCATATATATTGTTGAAGTTAAGAATGTTTCATCAGTCATTTAAAATTTTTTTTTTGCTTTTTTGTGTCCACTATCCCTGCAATGGTTTTTTATCCTTGAATAAACCTACGAATTCTTGTCAAATATCAGAAACAAAGTATACTTTTTTGGGTTATTGAAAGCAATTTGTAGGGATTTTTGCTTTTATGAGATTAATTTTTGGTTATCAAATTGGACCTTCATTTATTAGAATTATGATTTCTTAAGTTCAAGTTTTCATCCTTGTACAACTCTGAGTTCTAAGATTTGATACTTTTGAGTATTGGTAGGTTTTGAGTTATACTGACTGATATATTTATAAAAAACTTTACCCTCATTTATTTTCTAATGATGCAATTATCATGCTTTGAACGTATTGGCGGCAGGCCATTTTTTTCTATTTAGATTTCTTTTGAGGTTCGACCATTTTGTTGAATGATTCCATTTTCTGATGCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAAGGTGTAGTGGTCAGTATTATATTTGGTAGTCCATTTTTATATGCAACATCAAACCAGTTTTGTTGGCAAGTTTTGTCTCGTAATCTTATGTCGAATACTCTTGAGGTATTTCTCCCTAAACCAAGATGTTTCGTTTTCATTGACGATTATATAATTTTGACAGTTAATAGCCTTTTTTTCTTGTTTATTGACTTATTCTTTTTCTGTCCAAAAAAAACTTGTTCCTTTAGTACCTTTTTTGCTCGTTAGCATGCATTTCTTTTTTAACTTAGTCATCTCGTTGTGTGCTTGGCATTGTTTGAACATATTGAATTAGTGTTCATTGTGGAATGATGACTTGAAATCAATATGGAACTAAAGAAACTGTTAGTATGTGAAATCATTCATTTAATTGTTTT

Coding sequence (CDS)

ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCAGATCTCTTGTTGCAGCTTAAGGATCTTAAGGCTGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAATCAAGGTAGTGAGATTGTCGATAGCTCAAGTATTGACAGTAATTTCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTACCTCTTGATCTGCGCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAAGGTGTAG

Protein sequence

MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYAIKV
Homology
[Close]
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.4e-40
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 100
           ISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61  ISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ 99

[Close]
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 102
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-38
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 102
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.6e-38
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 102
           ISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-37
Identity = 88/101 (87.13%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV
Sbjct: 1   MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 102
            SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. NCBI nr
Match: XP_004149815.1 (60S ribosomal protein L35 [Cucumis sativus] >KGN51259.1 hypothetical protein Csa_008929 [Cucumis sativus])

HSP 1 Score: 174 bits (442), Expect = 1.31e-53
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. NCBI nr
Match: XP_008463526.1 (PREDICTED: 60S ribosomal protein L35 [Cucumis melo])

HSP 1 Score: 174 bits (442), Expect = 1.31e-53
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. NCBI nr
Match: XP_022992073.1 (60S ribosomal protein L35-like [Cucurbita maxima])

HSP 1 Score: 174 bits (440), Expect = 2.65e-53
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLIQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. NCBI nr
Match: XP_038889679.1 (60S ribosomal protein L35 [Benincasa hispida])

HSP 1 Score: 173 bits (438), Expect = 5.34e-53
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
          MARIKVHELRQKSK+DLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1  MARIKVHELRQKSKSDLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61 ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 99
          ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ
Sbjct: 61 ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 99

[Close]
BLAST of Cucsat.G10165 vs. NCBI nr
Match: XP_023525260.1 (60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172 bits (437), Expect = 7.58e-53
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match: A0A0A0KQT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.36e-54
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match: A0A1S3CJH2 (60S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.36e-54
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match: A0A6J1JY13 (60S ribosomal protein L35-like OS=Cucurbita maxima OX=3661 GN=LOC111488528 PE=3 SV=1)

HSP 1 Score: 174 bits (440), Expect = 1.28e-53
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLL+QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLIQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 3.67e-53
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

[Close]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 3.67e-53
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60
           MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQVN 101
           ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ +
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS 101

The following BLAST results are available for this feature:
BLAST of Cucsat.G10165 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5L08.4e-4092.9360S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1[more]
O806261.2e-3889.1160S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1[more]
Q9SF533.5e-3888.1260S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1[more]
Q9LZ414.6e-3888.1260S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1[more]
Q9M3D21.8e-3787.1360S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1[more]
BLAST of Cucsat.G10165 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149815.11.31e-5398.0260S ribosomal protein L35 [Cucumis sativus] >KGN51259.1 hypothetical protein Csa... [more]
XP_008463526.11.31e-5398.02PREDICTED: 60S ribosomal protein L35 [Cucumis melo][more]
XP_022992073.12.65e-5397.0360S ribosomal protein L35-like [Cucurbita maxima][more]
XP_038889679.15.34e-5398.9960S ribosomal protein L35 [Benincasa hispida][more]
XP_023525260.17.58e-5397.0360S ribosomal protein L35-like [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G10165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQT26.36e-5498.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G505200 PE=3 SV=1[more]
A0A1S3CJH26.36e-5498.0260S ribosomal protein L35 OS=Cucumis melo OX=3656 GN=LOC103501660 PE=3 SV=1[more]
A0A6J1JY131.28e-5397.0360S ribosomal protein L35-like OS=Cucurbita maxima OX=3661 GN=LOC111488528 PE=3 ... [more]
A0A6J1JVN43.67e-5397.0360S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1[more]
A0A6J1FH813.67e-5397.0360S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
NoneNo IPR availableGENE3D6.10.250.3450coord: 78..123
e-value: 1.4E-22
score: 81.6
NoneNo IPR availablePANTHERPTHR45722:SF1860S RIBOSOMAL PROTEIN L35-LIKEcoord: 1..123
NoneNo IPR availableCDDcd00427Ribosomal_L29_HIPcoord: 8..64
e-value: 4.6405E-6
score: 39.3931
IPR001854Ribosomal protein L29/L35TIGRFAMTIGR00012TIGR00012coord: 8..64
e-value: 6.4E-17
score: 59.3
IPR001854Ribosomal protein L29/L35PFAMPF00831Ribosomal_L29coord: 8..64
e-value: 6.8E-17
score: 61.2
IPR001854Ribosomal protein L29/L35HAMAPMF_00374Ribosomal_L29coord: 4..64
score: 12.437101
IPR036049Ribosomal protein L29/L35 superfamilyGENE3D1.10.287.310coord: 1..77
e-value: 2.3E-35
score: 122.8
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILY46561Ribosomal protein L29 (L29p)coord: 4..65
IPR04505960S ribosomal protein L35PANTHERPTHR4572260S RIBOSOMAL PROTEIN L35coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G10165.T1Cucsat.G10165.T1mRNA
Cucsat.G10165.T3Cucsat.G10165.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome