Csor.00g314150 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCAGCGACGCCGCCGTTTACAGCCAAAAACTCGACATCTTCCTCATTGCCGTCGGCTCCGCCGGCGCTGTCGTCACCATTTATCACTGCATCATGGCTTGTTGGTGTGACCGCCGCCGCCTCAACGCTGGCGACCAAACACCAGCGAACGACCTACACTCTATGTCGCTGGCGGAGACGCCACGGAGCACCGAGAATTCGGTCGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCAAAAGGCAGTGGACAGCGGCGGATGCGATGGCGATGGCACGTGCGCCATCTGTTTGAGCGAGTTCGAGGAGGGGGAGGAAATAAGAACGTTGCCGGAGTGTCTGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCAAGTTGTCCGATGTGTCGTACTGATGCTACTCCGACGTCGGTTCATGACAGGCTGCAGTTTGAGACGCAGCCGAGTTCTGGGATTATTGTGCACGTGCGGCCCACGAGGAATGAGTAATATGGAAATTACTTTCCTACTAACTCGACGGACAGTAAATTTCCACCCTTTTTTACACATTTATATATAAATAAAAAAAACTCTCCATTCGCGCTTCACTCCTAGCATTAAAATTCAAAGTTTGTGATTACTCGGGTGTTTATGGGTAGTGAAAAAGATTAAGCGTAAATATAAGATTGGAAGCCCAAAAGCCCAAAATTAAGTGGAATAAAGCGCTAAGATTCGAAACCCAAAGGCCCAAAGTCCCAAAATCAAGTCGAATAAAGCCCATAAGATCAAAGGCCCAAAATTACGGAATAAAGCGCAATGATTTGAAGCACAAAGGCCCAAAATTAAGTTGAATAAAGCGCTAAGATTGGCAGCCAAAAGGCCCAAAATTAAGGAATAAAGCCCTAAGATCAAAAGCCCAAAGGCCCAACATTAAGTTGAATAAAGCGCTAAGATTGGAAGCCCAAGAGGCCCAAAATAAAGTCGAATAAAGCGCTAAGATTGGAAGCCCAAAAGGCCCAAAATCAAGTTTAATAAAGCGCTAAGATTGGAAGCCCAAAGGCCCAAAATTGGGTCGAATAAAGCGCTGAGATTGGAAGCCCAAAGGCCCAAAATGAAGTCGAATAAAGCGCGGGCTTCTATAGGTTTGTATTACCGAAGGAAGAAAGCGGAAGAAGAAACCGAGTAATAAAAATAAAAGAGCAGAGCAAATTCCATATGTTTCTGGTCCCATGTGAGCGTTCCTCGATGGCCGCATTTGCCGACTCCTTTGCCATTCGCCTCTGATTTTTCCTTTTCTCAGCTCCTTGTTTTTGTGCACCTTAACACAGACAATAGCGGTTTTCCAGTTTGCGGAATCTCTTGCTCCTCTGCAATTCTCCTTTTTTGAAGCCATTGCAGACTTGCGGGGTGGGGTTTTAGAATCCGAAACTTGATCTCTGGCTAAAACCATGCCATTCTCAGCACAAGAGTTGCCGGTATGTTCAATAGATTCTTGGTTTAAAAGGAAAAAAGAGAAGCTCGTAATCATTTTTCATGATTGAAGTGTTTGATTCTCAGAGAAACTTTTCTTCTTCTGTTCTTGATGGATTATCTTTAAGCTTTTCTTCTGTTCTTGATGATGTAGCTCTGCATTTCATGTATCTTCATATGCCTAATTGCTGATGAACTTTGAATCCTAGGAAGTGGGAGGATTTTGAGGCTACTTTCTTTTAGAGCTTTCACTTTGATTAAACGTTATTAGTTTTGTTTTGCCTTTGTGAAATGGGAAATTCTGTTCATGTGTTTGTGAAGAGTGAAAGTACTTAGAAAGCTGGATTGGTGATGTAATTTAGGGGAAGAGATGCAATCTCTGAGTAGTGTAGGGCTTGGTTTGAGTGTGATATTTGGTTGCCTGTTCTTAGCTCTTGTTGCTGAGCTTTATTATCTGCTATGGTGGAAGAAGAGGTTCACTGACAGAGATGTTGAGAATGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAAATCATCTTCTTTGATCCACACAGCTCTAAATCCTCAAGATCTAAGTAGGATTCATGGAGATGAAGGAGAGTTTAACATGCACACAAACAACGATTTCTTAGTGAAACCCTTCGGAGAAGATGGCATAGAAACAGAGTTTATGACACTCCAAGGCCTCTCAGGGCCACCAAGATTTCTCTTCACTATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATGGGAAAGAATCAAGAAGTAGGAGCTTGAGTGATCTTCTTACTGTGGAAACTCCATATCTCACTCCATTAGCTTCTCCAACTCTTCTCCTATCAGATTCTTCTTATAAACCCCATGGATTCAATCCCCTCTTTGAATCAGTATCTGATGCAGAGTTCAACAAGATAAGGTCATCTCCACCTCCAAAATTCAAATTTCTACAGGAAGCAGAGGAGAAACTTAGGAGGAAACTACTGGAAGCAGCTGAGAAAGAGGACAAGTCTTGTATTACAATTGCTGTTGACAGGACAAGTCATTCAAGCACTTCTTCACAGGTACTTCCCTTGCCTTCTTCACCATCAACCTTCAGTTCATCAATCACCAAGAACTAA ATGTCATCCAGCGACGCCGCCGTTTACAGCCAAAAACTCGACATCTTCCTCATTGCCGTCGGCTCCGCCGGCGCTGTCGTCACCATTTATCACTGCATCATGGCTTGTTGGTGTGACCGCCGCCGCCTCAACGCTGGCGACCAAACACCAGCGAACGACCTACACTCTATGTCGCTGGCGGAGACGCCACGGAGCACCGAGAATTCGGTCGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCAAAAGGCAGTGGACAGCGGCGGATGCGATGGCGATGGCACGTGCGCCATCTGTTTGAGCGAGTTCGAGGAGGGGGAGGAAATAAGAACGTTGCCGGAGTGTCTGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCAAGTTGTCCGATGTGTCGTACTGATGCTACTCCGACGTCGGTTCATGACAGGCTGCAGTTTGAGACGCAGCCGAGTTCTGGGATTATTGTGCACACAATAGCGGTTTTCCAGTTTGCGGAATCTCTTGCTCCTCTGCAATTCTCCTTTTTTGAAGCCATTGCAGACTTGCGGGGGGAAGAGATGCAATCTCTGAGTAGTGTAGGGCTTGGTTTGAGTGTGATATTTGGTTGCCTGTTCTTAGCTCTTGTTGCTGAGCTTTATTATCTGCTATGGTGGAAGAAGAGGTTCACTGACAGAGATGTTGAGAATGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAAATCATCTTCTTTGATCCACACAGCTCTAAATCCTCAAGATCTAAGTAGGATTCATGGAGATGAAGGAGAGTTTAACATGCACACAAACAACGATTTCTTAGTGAAACCCTTCGGAGAAGATGGCATAGAAACAGAGTTTATGACACTCCAAGGCCTCTCAGGGCCACCAAGATTTCTCTTCACTATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATGGGAAAGAATCAAGAAGTAGGAGCTTGAGTGATCTTCTTACTGTGGAAACTCCATATCTCACTCCATTAGCTTCTCCAACTCTTCTCCTATCAGATTCTTCTTATAAACCCCATGGATTCAATCCCCTCTTTGAATCAGTATCTGATGCAGAGTTCAACAAGATAAGGTCATCTCCACCTCCAAAATTCAAATTTCTACAGGAAGCAGAGGAGAAACTTAGGAGGAAACTACTGGAAGCAGCTGAGAAAGAGGACAAGTCTTGTATTACAATTGCTGTTGACAGGACAAGTCATTCAAGCACTTCTTCACAGGTACTTCCCTTGCCTTCTTCACCATCAACCTTCAGTTCATCAATCACCAAGAACTAA ATGTCATCCAGCGACGCCGCCGTTTACAGCCAAAAACTCGACATCTTCCTCATTGCCGTCGGCTCCGCCGGCGCTGTCGTCACCATTTATCACTGCATCATGGCTTGTTGGTGTGACCGCCGCCGCCTCAACGCTGGCGACCAAACACCAGCGAACGACCTACACTCTATGTCGCTGGCGGAGACGCCACGGAGCACCGAGAATTCGGTCGTTCATTTGATTCCGGCTCACAAGTATGAGAAGCAAAAGGCAGTGGACAGCGGCGGATGCGATGGCGATGGCACGTGCGCCATCTGTTTGAGCGAGTTCGAGGAGGGGGAGGAAATAAGAACGTTGCCGGAGTGTCTGCATTCGTATCACGTGCCGTGTATCGACATGTGGCTTTACTCTCACTCAAGTTGTCCGATGTGTCGTACTGATGCTACTCCGACGTCGGTTCATGACAGGCTGCAGTTTGAGACGCAGCCGAGTTCTGGGATTATTGTGCACACAATAGCGGTTTTCCAGTTTGCGGAATCTCTTGCTCCTCTGCAATTCTCCTTTTTTGAAGCCATTGCAGACTTGCGGGGGGAAGAGATGCAATCTCTGAGTAGTGTAGGGCTTGGTTTGAGTGTGATATTTGGTTGCCTGTTCTTAGCTCTTGTTGCTGAGCTTTATTATCTGCTATGGTGGAAGAAGAGGTTCACTGACAGAGATGTTGAGAATGATTACAGTAGCCCAGCTAGAGAGCTATTTTACATGTTTTGTTGGAAAAAATCATCTTCTTTGATCCACACAGCTCTAAATCCTCAAGATCTAAGTAGGATTCATGGAGATGAAGGAGAGTTTAACATGCACACAAACAACGATTTCTTAGTGAAACCCTTCGGAGAAGATGGCATAGAAACAGAGTTTATGACACTCCAAGGCCTCTCAGGGCCACCAAGATTTCTCTTCACTATAATAGAAGAAACCAAGGAAGATTTAGAGTCTGAAGATGGGAAAGAATCAAGAAGTAGGAGCTTGAGTGATCTTCTTACTGTGGAAACTCCATATCTCACTCCATTAGCTTCTCCAACTCTTCTCCTATCAGATTCTTCTTATAAACCCCATGGATTCAATCCCCTCTTTGAATCAGTATCTGATGCAGAGTTCAACAAGATAAGGTCATCTCCACCTCCAAAATTCAAATTTCTACAGGAAGCAGAGGAGAAACTTAGGAGGAAACTACTGGAAGCAGCTGAGAAAGAGGACAAGTCTTGTATTACAATTGCTGTTGACAGGACAAGTCATTCAAGCACTTCTTCACAGGTACTTCCCTTGCCTTCTTCACCATCAACCTTCAGTTCATCAATCACCAAGAACTAA MSSSDAAVYSQKLDIFLIAVGSAGAVVTIYHCIMACWCDRRRLNAGDQTPANDLHSMSLAETPRSTENSVVHLIPAHKYEKQKAVDSGGCDGDGTCAICLSEFEEGEEIRTLPECLHSYHVPCIDMWLYSHSSCPMCRTDATPTSVHDRLQFETQPSSGIIVHTIAVFQFAESLAPLQFSFFEAIADLRGEEMQSLSSVGLGLSVIFGCLFLALVAELYYLLWWKKRFTDRDVENDYSSPARELFYMFCWKKSSSLIHTALNPQDLSRIHGDEGEFNMHTNNDFLVKPFGEDGIETEFMTLQGLSGPPRFLFTIIEETKEDLESEDGKESRSRSLSDLLTVETPYLTPLASPTLLLSDSSYKPHGFNPLFESVSDAEFNKIRSSPPPKFKFLQEAEEKLRRKLLEAAEKEDKSCITIAVDRTSHSSTSSQVLPLPSSPSTFSSSITKN Homology
BLAST of Csor.00g314150 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.0e-17 Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-16 Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 9.8e-16 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-15 Identity = 54/143 (37.76%), Postives = 65/143 (45.45%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 6.3e-15 Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Csor.00g314150 vs. NCBI nr
Match: KAG6578710.1 (putative E3 ubiquitin-protein ligase ATL44, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 895 bits (2313), Expect = 0.0 Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
BLAST of Csor.00g314150 vs. NCBI nr
Match: KAE8648538.1 (hypothetical protein Csa_008705 [Cucumis sativus]) HSP 1 Score: 669 bits (1725), Expect = 1.43e-237 Identity = 364/515 (70.68%), Postives = 394/515 (76.50%), Query Frame = 0
BLAST of Csor.00g314150 vs. NCBI nr
Match: XP_022938980.1 (uncharacterized protein LOC111445025 [Cucurbita moschata]) HSP 1 Score: 499 bits (1286), Expect = 7.59e-175 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0
BLAST of Csor.00g314150 vs. NCBI nr
Match: KAG7016241.1 (hypothetical protein SDJN02_21347, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 497 bits (1280), Expect = 6.20e-174 Identity = 253/256 (98.83%), Postives = 255/256 (99.61%), Query Frame = 0
BLAST of Csor.00g314150 vs. NCBI nr
Match: XP_023549575.1 (uncharacterized protein LOC111808034 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 488 bits (1255), Expect = 4.07e-170 Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy TrEMBL
Match: A0A6J1FLC6 (uncharacterized protein LOC111445025 OS=Cucurbita moschata OX=3662 GN=LOC111445025 PE=4 SV=1) HSP 1 Score: 499 bits (1286), Expect = 3.67e-175 Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy TrEMBL
Match: A0A0A0KQW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G512960 PE=4 SV=1) HSP 1 Score: 402 bits (1034), Expect = 7.50e-136 Identity = 231/320 (72.19%), Postives = 239/320 (74.69%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy TrEMBL
Match: A0A1S3C8Y2 (uncharacterized protein LOC103498168 OS=Cucumis melo OX=3656 GN=LOC103498168 PE=4 SV=1) HSP 1 Score: 400 bits (1027), Expect = 8.62e-135 Identity = 230/320 (71.88%), Postives = 238/320 (74.38%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy TrEMBL
Match: A0A5D3DHD2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00270 PE=4 SV=1) HSP 1 Score: 399 bits (1024), Expect = 2.46e-134 Identity = 229/320 (71.56%), Postives = 238/320 (74.38%), Query Frame = 0
BLAST of Csor.00g314150 vs. ExPASy TrEMBL
Match: A0A6J1BXB4 (uncharacterized protein LOC111006347 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006347 PE=4 SV=1) HSP 1 Score: 397 bits (1021), Expect = 6.75e-134 Identity = 225/318 (70.75%), Postives = 241/318 (75.79%), Query Frame = 0
BLAST of Csor.00g314150 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 154.1 bits (388), Expect = 2.7e-37 Identity = 121/291 (41.58%), Postives = 161/291 (55.33%), Query Frame = 0
BLAST of Csor.00g314150 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein ) HSP 1 Score: 151.0 bits (380), Expect = 2.3e-36 Identity = 103/249 (41.37%), Postives = 141/249 (56.63%), Query Frame = 0
BLAST of Csor.00g314150 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 2.2e-18 Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = 0
BLAST of Csor.00g314150 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-17 Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 0
BLAST of Csor.00g314150 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein ) HSP 1 Score: 86.3 bits (212), Expect = 7.0e-17 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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