Csor.00g313690 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGACGGTTGTTCAAATTCTAAAGAGAAGTTATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCGGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCCGCAGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTACTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGACGACAACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGACGGTTGTTCAAATTCTAAAGAGAAGTTATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCGGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCCGCAGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTACTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGACGACAACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA ATGAAAATGGCTTCTCCATCTCCTCTCCAAATTTTCTCACTCAAATCCTCGCATTCTTCCACCTTAATTTTCCTAAAGTTCAAAACTTTCATCCACACTATCCTCTTCTCTCACTTATGTCGCTTGGCTCGACCCATCTTCCGAGCCAAGTCGACGGTTGTTCAAATTCTAAAGAGAAGTTATCACTTCAAGAACAAGAACAAGAACAAGCTCATTTTCGGGTCGTTTAGACTCCACTACAACTGGTGCTCTTCCCACGTAATGCCCGTTCCGGATCCAACGTGGGAAGGGCATGTTGACTACGACCATGCTGCCGCAGCAGCTTCCACCCCGGACAGCCCACAGCTGTCCGGGTACTTGCAGTGGCTGGAGGAGAGAAAATTAGAGGGCGAACCGACGACGACGACGACAACGACGGAGGTGAACGAGATCGACAAATTAGCGGAGATGTTCATTGCAAGATGCCATGAGAAATTCAGGCTGGAGAAACAGGAATCGGCTAGAAGGTTTCAAGAGATGATGGCTAGAAGCATGTGA MKMASPSPLQIFSLKSSHSSTLIFLKFKTFIHTILFSHLCRLARPIFRAKSTVVQILKRSYHFKNKNKNKLIFGSFRLHYNWCSSHVMPVPDPTWEGHVDYDHAAAAASTPDSPQLSGYLQWLEERKLEGEPTTTTTTTEVNEIDKLAEMFIARCHEKFRLEKQESARRFQEMMARSM Homology
BLAST of Csor.00g313690 vs. NCBI nr
Match: KAG6578664.1 (hypothetical protein SDJN03_23112, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 353 bits (907), Expect = 6.82e-123 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of Csor.00g313690 vs. NCBI nr
Match: KAG7016204.1 (hypothetical protein SDJN02_21309, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 347 bits (891), Expect = 1.75e-120 Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of Csor.00g313690 vs. NCBI nr
Match: XP_038890518.1 (uncharacterized protein LOC120080048 [Benincasa hispida]) HSP 1 Score: 266 bits (680), Expect = 3.43e-88 Identity = 145/187 (77.54%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of Csor.00g313690 vs. NCBI nr
Match: XP_011655408.1 (uncharacterized protein LOC105435523 [Cucumis sativus] >KGN51368.1 hypothetical protein Csa_008863 [Cucumis sativus]) HSP 1 Score: 263 bits (672), Expect = 6.07e-87 Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Csor.00g313690 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260 bits (664), Expect = 7.91e-86 Identity = 137/185 (74.05%), Postives = 153/185 (82.70%), Query Frame = 0
BLAST of Csor.00g313690 vs. ExPASy TrEMBL
Match: A0A0A0KP26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 263 bits (672), Expect = 2.94e-87 Identity = 140/176 (79.55%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Csor.00g313690 vs. ExPASy TrEMBL
Match: A0A5D3BVA7 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00500 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 9.79e-86 Identity = 137/173 (79.19%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Csor.00g313690 vs. ExPASy TrEMBL
Match: A0A1S3C8P2 (uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 9.79e-86 Identity = 137/173 (79.19%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Csor.00g313690 vs. ExPASy TrEMBL
Match: A0A6J1HAU6 (uncharacterized protein LOC111462262 OS=Cucurbita moschata OX=3662 GN=LOC111462262 PE=4 SV=1) HSP 1 Score: 258 bits (660), Expect = 1.51e-85 Identity = 136/184 (73.91%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of Csor.00g313690 vs. ExPASy TrEMBL
Match: A0A6J1JV22 (uncharacterized protein LOC111487754 OS=Cucurbita maxima OX=3661 GN=LOC111487754 PE=4 SV=1) HSP 1 Score: 249 bits (635), Expect = 9.64e-82 Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 0
BLAST of Csor.00g313690 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.2 bits (313), Expect = 5.4e-29 Identity = 81/192 (42.19%), Postives = 106/192 (55.21%), Query Frame = 0
BLAST of Csor.00g313690 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 8.6e-27 Identity = 80/204 (39.22%), Postives = 107/204 (52.45%), Query Frame = 0
BLAST of Csor.00g313690 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 5.8e-15 Identity = 68/185 (36.76%), Postives = 95/185 (51.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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