Csor.00g311410 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g311410
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-CH-type domain-containing protein
Location	Csor_Chr15: 608859 .. 610717 (-)
RNA-Seq Expression	Csor.00g311410
Synteny	Csor.00g311410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACCACCCAAAACTCCCACGTTGTCGCAATGGAGGTAGGAGAAGTAGAACAGCCTCGCCGGACTTCAGGCGCCGGCGCTGACGCCTTACTAGCCTCCAATGATGTGCGGCAGTGCTCGGGGCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGAGCAAAGAAGGGAATCCTCTGTGTCGGAGTGCTCTTTAGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGACGAAAATGGAGAGGGATTGTCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCAGGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGACTTGGCTGCTGCTCATAAGCACTGTGCTGAAGCTTGGTTCAAGATCAAGGGCGACATGTAAGTTCCTCCAAATTGAACAACGCCTAATTGTTCTTAGGAATCTGTAGCCGCCATTACAAATCCCATCAGCGTTTTCTTAGGATCCATGTTTTTGTTTGTCAAAACGAACTGAAGTTTGATTTTCCCTAGTAGATGCAAATGCTTTAGTCTGATGTAGTATTGATTAGATCCCATTTCTTAGCTTTCTTTAAGGTTTTACTGATATTGACATCTCCATAAGTTCCGGCATAGCTATCAATATCATTTTCATCTATTACTTCAAAATGTATTGAACTAGATTCTCATTTCATTCCACCACTTATATGGTCAAAAGGGTTTGTTAGAAGTTAAGAACTATCTTCACTATATCTTCTGCATAACTTGAGAATGAGCATATCTAAAGAATTGAATTATTATAGTTGGATCTGTCAACAACTTTATTGCTTTTGGCCCTGCTACCAAACCATGCGTAGTTTGGCTACGAATTTTCTTCACTACTGGTGTGAGATCCCATATCGGTTCGAGAGGGAAACAAGTCATTTTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGAGAAGCCCGAAAGAGAAAGCCCAAATAGGACAATATCTTGCAAGAAATGCTTCATTTCCCTCTCCAACCAATGTGAGATTTCACAATCTATCCCATTGGGGGCTAGTGTCCTTGCTCGCACACGTGTCTGGCTATACAATTCAAGTCCAACCTCTAGCAGATATGGTTCGTTTGGGCCTATTATATATCATTGTTAGCCTCACGGTTTTAAAACGCATCTGCTAGGAAGAGGTTTCTAGTGGATTTGGCCTGTTACAAATGGTATCAGAGCTAGACACTAGGCGGTGTGCTAGCAAGGATGCTGGGCCTTAAAGGGGGTGGATTGTGAAATCTCACATCGATTGGAGAGTAGAACGAGTGCCAGCATGGATGCTGACTCCGAAAGGGGGTGGATTGCTAGATCTCTTATCGGTTGGAGAGGGGAATAAAACATTATCTATAAGAGTGTGGAAACCTCTCCCAATCAGTTGCTCGTGATTCATGTTGTTCTATTAGTTATGAGTGGTGTTTGAAGTAATTTGGCAGATATGTTTTCTGTTCAAACTGGGAAGAACTAAATATGTACCTTGTATGTCTGCTTGGCTTGCACTTACCCATCTGCAATTTGTTACAGCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGCTACTTATCAACCTGATTCGACAGAGCAACGCAACGACTCAAACGACGCAACGACAGCAACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTGGTAGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGTCATAGGTTCCTGAATTTCTTACTCGCCTGCATGGTCTTTGCCTTTGTCATATCATGGCTGTTTCACTTCAAAATACCCTCATAG

mRNA sequence

ATGACGACCACCCAAAACTCCCACGTTGTCGCAATGGAGGTAGGAGAAGTAGAACAGCCTCGCCGGACTTCAGGCGCCGGCGCTGACGCCTTACTAGCCTCCAATGATGTGCGGCAGTGCTCGGGGCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGAGCAAAGAAGGGAATCCTCTGTGTCGGAGTGCTCTTTAGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGACGAAAATGGAGAGGGATTGTCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCAGGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGACTTGGCTGCTGCTCATAAGCACTGTGCTGAAGCTTGGTTCAAGATCAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGCTACTTATCAACCTGATTCGACAGAGCAACGCAACGACTCAAACGACGCAACGACAGCAACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTGGTAGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGTCATAGGTTCCTGAATTTCTTACTCGCCTGCATGGTCTTTGCCTTTGTCATATCATGGCTGTTTCACTTCAAAATACCCTCATAG

Coding sequence (CDS)

ATGACGACCACCCAAAACTCCCACGTTGTCGCAATGGAGGTAGGAGAAGTAGAACAGCCTCGCCGGACTTCAGGCGCCGGCGCTGACGCCTTACTAGCCTCCAATGATGTGCGGCAGTGCTCGGGGCAGTCGAGGGCTGAGATTGTGGGGGCGGCGGCGGAGCAAAGAAGGGAATCCTCTGTGTCGGAGTGCTCTTTAGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGACGAAAATGGAGAGGGATTGTCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCAGGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGCAAGGATGACTTGGCTGCTGCTCATAAGCACTGTGCTGAAGCTTGGTTCAAGATCAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGCTACTTATCAACCTGATTCGACAGAGCAACGCAACGACTCAAACGACGCAACGACAGCAACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTGGTAGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGTCATAGGTTCCTGAATTTCTTACTCGCCTGCATGGTCTTTGCCTTTGTCATATCATGGCTGTTTCACTTCAAAATACCCTCATAG

Protein sequence

MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS

Homology

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BLAST of Csor.00g311410 vs. NCBI nr
Match: KAG6578436.1 (hypothetical protein SDJN03_22884, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 437 bits (1123), Expect = 2.29e-154
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222

[Close]

BLAST of Csor.00g311410 vs. NCBI nr
Match: XP_022938531.1 (uncharacterized protein LOC111444740 [Cucurbita moschata] >XP_022938532.1 uncharacterized protein LOC111444740 [Cucurbita moschata])

HSP 1 Score: 414 bits (1065), Expect = 1.24e-145
Identity = 210/222 (94.59%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQPRRTS AGADALLASNDVRQCSGQSRAEIVGAAAE+RRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECS+EMDLECGLAEIK+HLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVTATY+PDSTEQRNDSNDATTATAAAA       V
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. NCBI nr
Match: XP_022993070.1 (uncharacterized protein LOC111489196 [Cucurbita maxima] >XP_022993071.1 uncharacterized protein LOC111489196 [Cucurbita maxima])

HSP 1 Score: 399 bits (1024), Expect = 2.20e-139
Identity = 202/222 (90.99%), Postives = 207/222 (93.24%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQP RTS AGADALLAS+DVRQCSGQSRAEIVGAAAE+RRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVGAAAEKRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
            SECS+EMDLECGL+EIKVHLTKM RDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  ASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVT TY+PDSTEQRNDSND TTAT AAA       V
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHS EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSIEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. NCBI nr
Match: KAG7015997.1 (hypothetical protein SDJN02_21101 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371 bits (952), Expect = 4.84e-128
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQPRRTS AGADALLASNDVRQCSGQSRAEIVGAAAE+RRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAA    V
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAA----V 180

Query: 181 VVPPHSTEARNFWQGH 196
           VVPPHSTEARNFWQGH
Sbjct: 181 VVPPHSTEARNFWQGH 192

[Close]

BLAST of Csor.00g311410 vs. NCBI nr
Match: XP_022990745.1 (uncharacterized protein LOC111487535 [Cucurbita maxima])

HSP 1 Score: 351 bits (901), Expect = 1.22e-120
Identity = 179/222 (80.63%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           M+T QN+HVVAME  + E+P R S AG DA  AS+DVR+CS QS AEIVGAA E+RR SS
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAAVEKRRGSS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECS+EMDLECGL EIKVHL KMERDCRICHLSLDA+N ESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFK+KGDITCEICGSIAHNVT+T + DSTEQ N+SND TTAT AAA       V
Sbjct: 121 KHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHSTE RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 5.99e-146
Identity = 210/222 (94.59%), Postives = 214/222 (96.40%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQPRRTS AGADALLASNDVRQCSGQSRAEIVGAAAE+RRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAAEKRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECS+EMDLECGLAEIK+HLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVTATY+PDSTEQRNDSNDATTATAAAA       V
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL
Match: A0A6J1JXH7 (uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 1.06e-139
Identity = 202/222 (90.99%), Postives = 207/222 (93.24%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           MTTTQNSHVVAMEVGEVEQP RTS AGADALLAS+DVRQCSGQSRAEIVGAAAE+RRESS
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVGAAAEKRRESS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
            SECS+EMDLECGL+EIKVHLTKM RDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH
Sbjct: 61  ASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFKIKGDITCEICGSIAHNVT TY+PDSTEQRNDSND TTAT AAA       V
Sbjct: 121 KHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHS EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSIEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 351 bits (901), Expect = 5.89e-121
Identity = 179/222 (80.63%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESS 60
           M+T QN+HVVAME  + E+P R S AG DA  AS+DVR+CS QS AEIVGAA E+RR SS
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAAVEKRRGSS 60

Query: 61  VSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAH 120
           VSECS+EMDLECGL EIKVHL KMERDCRICHLSLDA+N ESGIPIELGCSCKDDLAAAH
Sbjct: 61  VSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAAH 120

Query: 121 KHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAV 180
           KHCAEAWFK+KGDITCEICGSIAHNVT+T + DSTEQ N+SND TTAT AAA       V
Sbjct: 121 KHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAA-------V 180

Query: 181 VVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVPPHSTE RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVPPHSTETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL
Match: A0A6J1GZN3 (uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC111458938 PE=4 SV=1)

HSP 1 Score: 343 bits (880), Expect = 9.65e-118
Identity = 178/223 (79.82%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAA-EQRRES 60
           M+T +++HVVAME  + E+P R S AG  A  AS+DVR+CS QS AEIVGAAA E+RR S
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAVEKRRGS 60

Query: 61  SVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAA 120
           SVSECS+EMDLECGL EIKVHL KMERDCRICHLSLDA+N ESGIPIELGCSCKDDLAAA
Sbjct: 61  SVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLAAA 120

Query: 121 HKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAA 180
           HKHCAEAWFK+KGDITCEICGSIAHNVT+T + DSTEQ N+SND TTAT AAA       
Sbjct: 121 HKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAA------- 180

Query: 181 VVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           VVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL
Match: A0A1S3B429 (uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 9.88e-113
Identity = 175/231 (75.76%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 1   MTTTQNSHVVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEI---------VGA 60
           MTT Q SHVVAMEV + +Q  RT          S++VR+CS  SRA+I         V A
Sbjct: 1   MTTVQASHVVAMEVEQHQQHPRTD---------SDEVRRCSVHSRADILEEEGVAVAVAA 60

Query: 61  AAEQRRESSVSECSLEMDLECGLAEIKVHLTKMERDCRICHLSLDASNQESGIPIELGCS 120
           AAE+RR SSVSECS+EMDLECGLAEIKVHL K+ERDCRICHLSLDASN ESGIPIELGCS
Sbjct: 61  AAEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCS 120

Query: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAA 180
           CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT TY+ DSTEQRN+ N+ATTATA A
Sbjct: 121 CKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATATA 180

Query: 181 AAAAAAAAVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 222
           A       +V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 A-------IVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Csor.00g311410 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-55
Identity = 113/201 (56.22%), Postives = 137/201 (68.16%), Query Frame = 0


Query: 24  SGAGADALLASNDVRQCSG--QSRAEIVGAAAEQRRESSVSECSLEMDLECGLAEIKVHL 83
           S +G D      + R+ SG  +   EIV    ++ R S+ S CS+E+DLE GL E  VHL
Sbjct: 19  SSSGCD---GDGEPRRSSGAVEKEEEIV---KDEERRSNASVCSVEIDLELGLPEKVVHL 78

Query: 84  TKMERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGS 143
           ++ ERDCRICH+SLDA+N ESG+PIELGCSCK DLAAAHKHCAE WFKIKG+  CE+CGS
Sbjct: 79  SQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVCGS 138

Query: 144 IAHNVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAVVVPPHSTEARNFWQGHRFLNF 203
           IA NV  + + +S E RN++N     T   +           P   E R+FWQGHRFLNF
Sbjct: 139 IAGNVVGSVEVESEESRNEANGVENLTLRTSG----------PRLVEGRSFWQGHRFLNF 198

Query: 204 LLACMVFAFVISWLFHFKIPS 223
           LLACMVFAFVISWLFHF +PS
Sbjct: 199 LLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Csor.00g311410 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 70/138 (50.72%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 85  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 144
           E+DCRICHL L++S  E G P+ LGCSCKDDL   HK CA+ WFKIKG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 145 NVTATYQPDSTEQRNDSNDATTATAAAAAAAAAAAVVVPPHSTEARNFWQGHRFLNFLLA 204
           N    ++ D     N+    T  T      A     +V    ++ R   +G+RFLNFLL 
Sbjct: 135 NF---FKVD-----NEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLT 194

Query: 205 CMVFAFVISWLFHFKIPS 223
           CMV AFVISW FHF +PS
Sbjct: 195 CMVCAFVISWFFHFNLPS 204

[Close]

BLAST of Csor.00g311410 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-29
Identity = 69/140 (49.29%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 85  ERDCRICHLSLDASNQESGIPIELGCSCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAH 144
           E+DCRICHL ++ S    G  IELGCSCKDDLA AH+ CAE WFKIKGD TCEIC S+A 
Sbjct: 81  EKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 145 NVTATYQ--PDSTEQRNDSNDATTATAAAAAAAAAAAVVVPPHSTEARNFWQGHRFLNFL 204
           NV    +    + E+R   N   TA      A            T   N WQ  R +N +
Sbjct: 141 NVGGANEMVGSTMEERELRNGEETAAGEGGGA------------TVVENRWQPQRVVNLV 200

Query: 205 LACMVFAFVISWLFHFKIPS 223
           LACMVF F ISW+FHF + S
Sbjct: 201 LACMVFGFFISWIFHFHVSS 205

[Close]

BLAST of Csor.00g311410 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 70/166 (42.17%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 86  RDCRICHLSLDASNQES-------------------------------GIPIELGCSCKD 145
           RDCRICHL L+ + +                                 G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 146 DLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSNDATTATAAAAAA 205
           DL  AH  CAE WFKIKG++TCEICG++A NV         EQ N  + A+T + AAA  
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAGQ 198

Query: 206 AAAAAVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKI 221
           +           TE R  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 SLT--------QTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Csor.00g311410 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.5e-17
Identity = 60/166 (36.14%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 9   VVAMEVGEVEQPRRTSGAGADALLASNDVRQCSGQSRAEIVGAAAEQRRESSVSECSLEM 68
           V+  E  +V++P++  G   D+ +A  DV  CS    A +V         ++VS    E 
Sbjct: 24  VLIEEEEDVKKPQQ--GKENDSRMA-KDVVSCSSNISAHVVHEEVAD-NVTAVSCNEAES 83

Query: 69  DLECGLAEIKVHLTKM----ERDCRICHLSLDASNQESGIP-------IELGCSCKDDLA 128
           D+    A+ + H   +    ER CRICH   D S + SG         IE+GC CK++L 
Sbjct: 84  DISKAKAK-EFHTIDLSGVGERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELG 143

Query: 129 AAHKHCAEAWFKIKGDITCEICGSIAHNVTATYQPDSTEQRNDSND 164
            AH HCAEAWFK++G+  CEICG  A NVT     D + +R+++ D
Sbjct: 144 LAHFHCAEAWFKLRGNSVCEICGCTAKNVTVRLMEDWSGERDNTLD 184

The following BLAST results are available for this feature:

BLAST of Csor.00g311410 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g311410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578436.1	2.29e-154	100.00	hypothetical protein SDJN03_22884, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022938531.1	1.24e-145	94.59	uncharacterized protein LOC111444740 [Cucurbita moschata] >XP_022938532.1 unchar...	[more]
XP_022993070.1	2.20e-139	90.99	uncharacterized protein LOC111489196 [Cucurbita maxima] >XP_022993071.1 uncharac...	[more]
KAG7015997.1	4.84e-128	96.94	hypothetical protein SDJN02_21101 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022990745.1	1.22e-120	80.63	uncharacterized protein LOC111487535 [Cucurbita maxima]	[more]

BLAST of Csor.00g311410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEB0	5.99e-146	94.59	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A6J1JXH7	1.06e-139	90.99	uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196...	[more]
A0A6J1JQX9	5.89e-121	80.63	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]
A0A6J1GZN3	9.65e-118	79.82	uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A1S3B429	9.88e-113	75.76	uncharacterized protein LOC103485546 OS=Cucumis melo OX=3656 GN=LOC103485546 PE=...	[more]

BLAST of Csor.00g311410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	1.4e-55	56.22	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	1.1e-31	50.72	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	3.0e-29	49.29	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.9e-28	42.17	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G34200.1	4.5e-17	36.14	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 87..140 e-value: 8.2E-18 score: 75.2
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 88..139 e-value: 5.8E-9 score: 35.9
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 80..146 score: 16.897436
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 75..150 e-value: 4.8E-14 score: 53.7
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 7..222
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 7..222
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 88..140 e-value: 1.47451E-10 score: 53.1
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 85..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g311410.m01	Csor.00g311410.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding