Csor.00g311040 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTAGTAAGTTTGCATCAAAGCATCAAAAGACGCCCGAGTTGAATGAGATTTTTGAGGTTGCTCCTAGTAAGAATATTAAAGCATCCTCAGCATCAGGTGAGGCCTAGCATCAAAACATGCCGAAGACTCCCATTCCCCCGAGTCTAAACACCTGAGCCCCCCTCACGACTTTTCCCTTTCTTCCTTTGGTACATAAGTACTGGATCTTCTTAAACCTCAAAGCAACTTCGTAAGAGTAGCTGAAGACTTCACTATTTTTATTACAGGTGGCCTACTTGCCTTTGTCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAAGAACCCTTGGTAATTTTTATTTGTTCTTTTGGATTCCTGAAAACTTACATTGTTCCTCCAAACAGACGAGTAATTCTTCTCTACAGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGGGTCGAAACAGGGAGCTTGCAAAGTCATCAACGTTAGTAGCGCTACTTGGTTTTCATTATTATGCAAACAAACAAAAAATATATTGCGGCCATTATCTAGTTCAACAAATTGTTTTTGTTTTATTTTTACTTCTGTTTTATTCTTGCATGTTGCAACTAAACTTTCCTTCTCTTGCTTTCCAGGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAAGTACACAAACTTCCATTTACATCGTATCACTCCTGATAGTTTTGATTAGAAATAAATGTGAAGAACTTTCACGTGTGTTCACACTTTCTTCTGGCACGTTATACGTACAATGACAGCCATTTCTACTGGAGGAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACTACAAGGCATCCAGAATTTGCAGAAATTATTCTTGTGTTTGAGTGTTCTGAATTAGAATTAGAACTAGAATTTGAGGTTGTTAAATAACTGTTATTCTTGATAATTAAATCTAAGAGTGATTCGTTTTTAAAATTTATTTTCAGCGCATCCTCTATTATGTGGATTTGATTATTTGTTTGATTAGCAATGTCTAACACAAGGCATGGTACTGTTGATATGAGGTGGAATAATACTAATATGAAGTTTTTATTATTATCTTTTCTAGCAGAGAAGCAAAGGAAGACTCAAATTTTAGAATATCCTTTTTCATATTATTTTAAATAATTACTAGTTAAAAAAATTTAGCTAGGTTTCTCTGATAAGCTTGTAAGTTAAGGTTAATATAATCATCAAACTTTCTTTCTTAAATCATATTATACCATTAACTTTTTTGTCATCCTCATATCCGTTTTTCGTTTTTAGGTTTACATTACTTACATCTAGCTTCGTACATATTTGTTCAAATCCTATGACGTGATGTGATGGGCGTATTCTTACTGTTTTGTTACATTCAATTTTCCTATCCCCGAGTAATATGCACTATTTCATTTCTAAATCTTGCATACTTTTAGTTTCTTGTGAGTTGTGGATTTTCAACCTTATGAATCACGTACCTTGTAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTCATTTCTTATCTGGAGTCTTCTACTGATCTGCCGTGTGCTGAACAACGAGAGTTGAAAAAATGAAAGTACATCCTTGTTACATAGTGAGTGATTTTACCTTTTTTCTCCTGGCGCATTACATTTTTCAAGAGCCGAAGGGATGCATGATTCGAATTTACTTTCCCACGGTAGCCTGTGCCGCTTTTTTGGGTGGATTAGGGTAAATTTTGAGGTTTGACAGTGTCATTAATTAAAACAAACTAAAAGCGAATTTTATATTTAATAAAATGTTTGAACTTTCAAAGCTTGTATCTTTAAATTTTAAAAGATTTGAATGTTCAAAAACTAATTTTGTAATATAATCTGTTATAATGGTTGTGCTTGCAGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAGTAATTTTTCTGTCAAAGTAATTTTTTGATCATTGCTTTTAGTAGTTGTATGACTTATAACATCAACTTCCCCAAGTTGCTATGAAAATACATCATCTGGACTGGAATGCTGTATTGTAATTTTCGTATTCTGCACAGAGAAAAATAAAATTACTATATGTTTGTCCTCCAATGACCAATCCAACCTACGAAGTTATTTTTATACGAACACGACTCTCCATAATGATACGATACTGTCCACTTTGAGCACAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCTTCATGCCAATGGAGAGAGTATTCCTTGATTATAAACCCATGATCATTTCCTAAATTAGTCGATGTGAGACTTTTATCATCCAACCGTTATAAATATTGAACTTCGGAACTCTGGTAACTACACGCACTTCATCTTTTTCTGGTACTCGATGGGCATGTTCTTGAAACTACTGTCGCTTGCGTGCTTAAGCAGCAGACGCACAACCAGGTATCTTTTTTGTAAAAAGAAAGTAGTGTGTTTTATTGTGGCCACGTTAAGTGTGGATCCACCCTTCCGTCGTTGGATCCTAGTTACCCAACCAACCAAGTAATTGGATACTCCACTTCTGTCGTTGGATCCTACTTACGGATCTACTTCTAGATTTTTTCCTAGATTTACCTGGTCTTCTATAGCCAGCCATTTTTGTTACACACGAGTATATAGTTCTTATATAGTTGAATCCAAACCTCATCCTACGAATTTTAATACTTGTCTAAGAACGACTGAAGCTTTGATTCAGATATTTCCGTTCTCGTCTGTTTGCGTTGGATCTTTACTTGGCTCCCTGTCGTTTATATCAATGCACAATTGCAGACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGTATTTTCATGATCTCTTTTCTTTACTTTGATTTTTTAACGATCGGATAATTAAGCATCTGATTTTTTTTAACAATCTGACAATTAAGCATTTGGCTTACTCATTCATTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAGGTTTGTTGAGTATAGTTCATACGCACATTCATGATCATCTATGTTATTTTAATGTTTTCTTTAACGTTGGTAGATGTAAACTCTACGTACTTTCAACATTTGATATTATTATTTTCACTAGGAATAGCCCTTTAGCTGCTGAGTTTGAGGAAGCTAAATACTACACACTAGTATATGGCAATTCAGCCAGCGCTGCTTATGTTGCCATAAAGCTGCTCTACAAAATATGATTGATTTTTTTTTATTTATTTATGAAAAGAAAATTCCAATCGAAAGGACGCATTATCATGATATCATTCAATATATTTACTAAACTTTTGTTTTCTCATTCAATTCCAAGCATCATACCTCTGAATAGACGAGTCAATATTCTGAATCATCTTGCAGGATTTGTACTGTTCGGAATCCTCTAGAAATCTGACCATTCCATCCTTCTGA ATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTAGTAAGTTTGCATCAAAGCATCAAAAGACGCCCGAGTTGAATGAGATTTTTGAGGTTGCTCCTAGTAAGAATATTAAAGCATCCTCAGCATCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAAGAACCCTTGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGGGTCGAAACAGGGAGCTTGCAAAGTCATCAACGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAACCATTTCTACTGGAGGAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTCATTTCTTATCTGGAGTCTTCTACTGATCTGCCAGCCGAAGGGATGCATGATTCGAATTTACTTTCCCACGGTAGCCTGTGCCGCTTTTTTGGGTGGATTAGGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAGGATTTGTACTGTTCGGAATCCTCTAGAAATCTGACCATTCCATCCTTCTGA ATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTAGTAAGTTTGCATCAAAGCATCAAAAGACGCCCGAGTTGAATGAGATTTTTGAGGTTGCTCCTAGTAAGAATATTAAAGCATCCTCAGCATCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAAGAACCCTTGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGGGTCGAAACAGGGAGCTTGCAAAGTCATCAACGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAACCATTTCTACTGGAGGAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTCATTTCTTATCTGGAGTCTTCTACTGATCTGCCAGCCGAAGGGATGCATGATTCGAATTTACTTTCCCACGGTAGCCTGTGCCGCTTTTTTGGGTGGATTAGGGGACTCTCAAACTGTTGGAAGAATCAGCTTCCAGCATCCATTATCTGTCAAACCTACATGTTCAAATACGATGGTGTACACGGCCAGTGGAAGCACCACGATATTAAGGTTAAGGACGGCAAGACTCTTCTCTTTGGAGAAAAAGCAGTCGCCGTTTTTGGTACTAGGAACCCGGAGGAGATCCCATGGGGAGAGGCTGGAGCTGAGTATGTGGTTGAATCCACTGGAGTTTTCACTGATAAGGACAAGGCTGCTGCTCATTTGGAGGATTTGTACTGTTCGGAATCCTCTAGAAATCTGACCATTCCATCCTTCTGA MDVSALIREALAARATESHIVLDYVSFTNVSFSPEFSRACESEQVSKFASKHQKTPELNEIFEVAPSKNIKASSASVMITTFRKESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGGRNRELAKSSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWRKAFPLYGRNYDSVVKAIETMEKSLPGFFYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDLPAEGMHDSNLLSHGSLCRFFGWIRGLSNCWKNQLPASIICQTYMFKYDGVHGQWKHHDIKVKDGKTLLFGEKAVAVFGTRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLEDLYCSESSRNLTIPSF Homology
BLAST of Csor.00g311040 vs. ExPASy Swiss-Prot
Match: Q94IG7 (Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 7.9e-72 Identity = 142/229 (62.01%), Postives = 168/229 (73.36%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy Swiss-Prot
Match: O24164 (Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII PE=1 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 3.3e-70 Identity = 129/165 (78.18%), Postives = 148/165 (89.70%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy Swiss-Prot
Match: Q8S9J1 (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.4e-70 Identity = 131/189 (69.31%), Postives = 156/189 (82.54%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy Swiss-Prot
Match: P34921 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus OX=3570 GN=GAPC PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32 Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy Swiss-Prot
Match: P26520 (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida OX=4102 GN=GAPC PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.1e-32 Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0
BLAST of Csor.00g311040 vs. NCBI nr
Match: KAG6578399.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6578405.1 Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 746 bits (1925), Expect = 1.12e-271 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
BLAST of Csor.00g311040 vs. NCBI nr
Match: KAG6578391.1 (Protoporphyrinogen oxidase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 746 bits (1925), Expect = 5.94e-270 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
BLAST of Csor.00g311040 vs. NCBI nr
Match: XP_022938677.1 (protoporphyrinogen oxidase, chloroplastic/mitochondrial-like [Cucurbita moschata] >KAG7015970.1 Protoporphyrinogen oxidase, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 333 bits (853), Expect = 3.47e-111 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g311040 vs. NCBI nr
Match: KAG7015959.1 (Protoporphyrinogen oxidase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 321 bits (822), Expect = 5.34e-104 Identity = 161/166 (96.99%), Postives = 161/166 (96.99%), Query Frame = 0
BLAST of Csor.00g311040 vs. NCBI nr
Match: XP_022992609.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 325 bits (832), Expect = 1.14e-103 Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy TrEMBL
Match: A0A6J1FER9 (protoporphyrinogen oxidase, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111444831 PE=4 SV=1) HSP 1 Score: 333 bits (853), Expect = 1.68e-111 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy TrEMBL
Match: A0A6J1JY02 (Protoporphyrinogen oxidase OS=Cucurbita maxima OX=3661 GN=LOC111488903 PE=3 SV=1) HSP 1 Score: 325 bits (832), Expect = 5.51e-104 Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy TrEMBL
Match: A0A6J1JQC4 (Protoporphyrinogen oxidase OS=Cucurbita maxima OX=3661 GN=LOC111488903 PE=3 SV=1) HSP 1 Score: 325 bits (832), Expect = 6.38e-104 Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy TrEMBL
Match: A0A1S4DU35 (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1) HSP 1 Score: 322 bits (824), Expect = 1.46e-103 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Csor.00g311040 vs. ExPASy TrEMBL
Match: A0A6J1FEP1 (Protoporphyrinogen oxidase OS=Cucurbita moschata OX=3662 GN=LOC111444814 PE=3 SV=1) HSP 1 Score: 323 bits (828), Expect = 2.55e-103 Identity = 162/166 (97.59%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of Csor.00g311040 vs. TAIR 10
Match: AT5G14220.1 (Flavin containing amine oxidoreductase family ) HSP 1 Score: 266.5 bits (680), Expect = 3.1e-71 Identity = 131/189 (69.31%), Postives = 156/189 (82.54%), Query Frame = 0
BLAST of Csor.00g311040 vs. TAIR 10
Match: AT5G14220.2 (Flavin containing amine oxidoreductase family ) HSP 1 Score: 266.5 bits (680), Expect = 3.1e-71 Identity = 131/189 (69.31%), Postives = 156/189 (82.54%), Query Frame = 0
BLAST of Csor.00g311040 vs. TAIR 10
Match: AT1G13440.1 (glyceraldehyde-3-phosphate dehydrogenase C2 ) HSP 1 Score: 139.0 bits (349), Expect = 7.4e-33 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Csor.00g311040 vs. TAIR 10
Match: AT1G13440.2 (glyceraldehyde-3-phosphate dehydrogenase C2 ) HSP 1 Score: 139.0 bits (349), Expect = 7.4e-33 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Csor.00g311040 vs. TAIR 10
Match: AT3G04120.1 (glyceraldehyde-3-phosphate dehydrogenase C subunit 1 ) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-31 Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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