Csor.00g311010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTGCGCAGCAACGCCAAAAAATGCTATTGTTGAGAGAAGCTAAAGAAGAAGAAAATATCCGAGCTGCTACTGTTTGGGATGAGGCCTTTAAGGTTGCTGTTAGTAAGTTTGCATCAAAGCATCAAAACATGCCCAAGTTTGAAGATGTATAATATCCTGTGATTTAGAAGAACTAGTTTGATGGATAGCTTATGCATATCAATGGCATTCTGAATTTTTTTTTTTTTTTTTATCTGGGTTTTTGTTTTTGGGTTCATTTTTAATTTGAGTTTTTGTTTTTTTTAAGAATTTCGACTTCTATTCTTTTTTGTTTCTTCTTCTATTTTGACCGAATAAAATATGAGTGTGAAACATGAAACCAAAAACTTAGAGCTGAACGGAAGTGCCAAAATAAAAAATGTGTCTAAATTGATTTTGTTTTTTAGAAGTTGTGTGAGTTGATTTTGTTTTTTAGAAGTTGTGTGAGACGTCAATTTTCTAAGGATTAGTCTTAATTGACATAAGAACATGACGTAGCTAGTTCATAAAATCAAGAAATGCAAACAAAAACATAAAGGGTTCGATAACATGATGAAGTTATAGGTTACGGTGACAATGAGGATTTTGTATCGAACTGAAGTCTTTGCTGTGGTAGAGATGACGAGAAGATTAGTATTCGATCAGGGTGAGTTAAATTCAATCATTTTTTATCCTTAAATAAATGTTTGCTTCATTATTTTTCGTCTCTTCTTGCAATCCATACTCCGAACTTGGGCTCTTGATGTTATGTAATTTCATGGAGTTTTGCCCCTACATCAATATTGTAATGCATTCTTAAAGGATGCCGACTTGCCAAGTATCCATATTGATATAATCCATGTAGTTCTTCTGATTGCTGTAGGCTACGCTTTTATTGTTAACTTGGGTATATAGGTACACGTATAGTAAAGCACTATGTTTCCATCCTAACAGATAAATATATAAAAACACACGAGTTTAGTACACATATGACATGTGGATAACAAAAGTGCTCCAAAGAATTGTTACCTAATATTTTTGACACCGTTGGTATGCTTATCAGATTACTACTTCTAAAATCATTTTTATCATTCTTTAGGATTCAGCATGACTATTGTGGTGCAGTTTAGTGTACGAGTTTGCTTTTTTGATAATCACACCTTAGAAGTAACTTTTCATCCATTGTTTCATCTGAAACAATAGAAAATCTCCTTAAAGCATGAGACGCGCTAGGGAACATTAGCTCTTTGGAGCTTAAGTGCAAGGTGCTAGGAAAAGAACATGAGCCTTAATTAGATGAGTTAGACAATATGTGAAAAGACGAATAATATTAAGTTTTAGAGCCTTCATTCATGGAAGTTCAATTCCTATTTTTGTCTTTAAACTTTCATGCCTGTTCTTTTGTCATTTAAACTCTAAACACGCTATCTTAGTCCCTAAACTTTATTATAGTCTCCAAACATTTTTCATCATTTTGGTGAACAAGCAATTTGCTAAAATAATTTTTTACTCGGAATTTAGGGTCTAAAAAGCTTGAAAGTTAGGGATCAAAATGGAACTTATAGCTCAAGGACCAAAAGAAATGAAGGCCTTGTTTAAGGCTTTAACATTAGTAAGAGAGTGATTGTCTTTACTACAGTCATCCTAAAAGTTCTCTCCTGTGGTTCTTTTACGTCCTAGATGGTTGAAGCTTAGGAAGGTGCTTAGGGTGCATCCAACTAGCTCACTTCCCCTTGTGGTTGCATAGGTGCACTTTCCGAAACAGGGGATGTTACTGACAAATATTTTGATATCCTTGTTAGATTAGTGTGATTATCCATGTAGTCTCACAAGTACCATTTAAATATAGCTGTTGTTGGAATCATTTTGGAGGATTATTTGTTTATTTATTTAAGTAGAAAGAAATGAATCTTCTTCTACCTTCCTTGCTGTACCATGTTTATCTTGTTCATTTTCAGGTGGCTGAAAGGACTCTGTTTTTATGGAACAATAGTCACATTGAGAACCTAATAAAAAAGAACCTGATTTTGCCGATTATATTTCCTGCACTGGAGAGAAATTCAAGAAACCATTGGAATCAGCATGTACAAAACTTGACACAAAACGTCCGAAAGATCTTCTTGGATGCTGACCCTGAGCTGTTGAGGAATGTTTGCTTAAATTTCAAGAAGAAGAGACACACGAGAGAAGGATACGAAATCTAA ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTGCGCAGCAACGCCAAAAAATGCTATTGTTGAGAGAAGCTAAAGAAGAAGAAAATATCCGAGCTGCTACTGTTTGGGATGAGGCCTTTAAGGTTGCTGTTAGATTCAGCATGACTATTGTGGTGCAGTTTAGTGTACGAGTTTGCTTTTTTGATAATCACACCTTAGAAGTGGCTGAAAGGACTCTGTTTTTATGGAACAATAGTCACATTGAGAACCTAATAAAAAAGAACCTGATTTTGCCGATTATATTTCCTGCACTGGAGAGAAATTCAAGAAACCATTGGAATCAGCATGTACAAAACTTGACACAAAACGTCCGAAAGATCTTCTTGGATGCTGACCCTGAGCTGTTGAGGAATGTTTGCTTAAATTTCAAGAAGAAGAGACACACGAGAGAAGGATACGAAATCTAA ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGCAGGTTGCGCAGCAACGCCAAAAAATGCTATTGTTGAGAGAAGCTAAAGAAGAAGAAAATATCCGAGCTGCTACTGTTTGGGATGAGGCCTTTAAGGTTGCTGTTAGATTCAGCATGACTATTGTGGTGCAGTTTAGTGTACGAGTTTGCTTTTTTGATAATCACACCTTAGAAGTGGCTGAAAGGACTCTGTTTTTATGGAACAATAGTCACATTGAGAACCTAATAAAAAAGAACCTGATTTTGCCGATTATATTTCCTGCACTGGAGAGAAATTCAAGAAACCATTGGAATCAGCATGTACAAAACTTGACACAAAACGTCCGAAAGATCTTCTTGGATGCTGACCCTGAGCTGTTGAGGAATGTTTGCTTAAATTTCAAGAAGAAGAGACACACGAGAGAAGGATACGAAATCTAA MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYVSFTNVSFSPEFSRACESEQVAQQRQKMLLLREAKEEENIRAATVWDEAFKVAVRFSMTIVVQFSVRVCFFDNHTLEVAERTLFLWNNSHIENLIKKNLILPIIFPALERNSRNHWNQHVQNLTQNVRKIFLDADPELLRNVCLNFKKKRHTREGYEI Homology
BLAST of Csor.00g311010 vs. ExPASy Swiss-Prot
Match: Q9LK25 (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.4e-40 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy Swiss-Prot
Match: O04331 (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.7e-39 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy Swiss-Prot
Match: Q54GI9 (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.9e-33 Identity = 92/219 (42.01%), Postives = 136/219 (62.10%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy Swiss-Prot
Match: Q9LY99 (Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.3e-33 Identity = 90/208 (43.27%), Postives = 120/208 (57.69%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy Swiss-Prot
Match: P84173 (Prohibitin OS=Gallus gallus OX=9031 GN=PHB PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32 Identity = 82/205 (40.00%), Postives = 118/205 (57.56%), Query Frame = 0
BLAST of Csor.00g311010 vs. NCBI nr
Match: KAG6578396.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 646 bits (1667), Expect = 7.13e-234 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. NCBI nr
Match: XP_022938672.1 (prohibitin-4, mitochondrial-like [Cucurbita moschata] >XP_022938673.1 prohibitin-4, mitochondrial-like [Cucurbita moschata] >KAG6578388.1 Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 433 bits (1114), Expect = 5.06e-151 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. NCBI nr
Match: KAG6578402.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 434 bits (1116), Expect = 7.67e-151 Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. NCBI nr
Match: KAG6578377.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 429 bits (1103), Expect = 2.39e-149 Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Csor.00g311010 vs. NCBI nr
Match: XP_022938678.1 (prohibitin-4, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022938679.1 prohibitin-4, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022938680.1 prohibitin-4, mitochondrial-like isoform X2 [Cucurbita moschata] >KAG6578386.1 Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 372 bits (954), Expect = 2.91e-127 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy TrEMBL
Match: A0A6J1FJK0 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444828 PE=3 SV=1) HSP 1 Score: 433 bits (1114), Expect = 2.45e-151 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy TrEMBL
Match: A0A6J1FES9 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444832 PE=3 SV=1) HSP 1 Score: 372 bits (954), Expect = 1.41e-127 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy TrEMBL
Match: A0A6J1JU21 (Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111488908 PE=3 SV=1) HSP 1 Score: 365 bits (937), Expect = 9.15e-123 Identity = 183/187 (97.86%), Postives = 184/187 (98.40%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy TrEMBL
Match: A0A6J1JCS5 (Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111483298 PE=3 SV=1) HSP 1 Score: 181 bits (458), Expect = 2.10e-51 Identity = 107/211 (50.71%), Postives = 142/211 (67.30%), Query Frame = 0
BLAST of Csor.00g311010 vs. ExPASy TrEMBL
Match: A0A6J1EVK6 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111438475 PE=3 SV=1) HSP 1 Score: 181 bits (458), Expect = 2.10e-51 Identity = 107/211 (50.71%), Postives = 142/211 (67.30%), Query Frame = 0
BLAST of Csor.00g311010 vs. TAIR 10
Match: AT3G27280.2 (prohibitin 4 ) HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of Csor.00g311010 vs. TAIR 10
Match: AT3G27280.1 (prohibitin 4 ) HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of Csor.00g311010 vs. TAIR 10
Match: AT5G40770.1 (prohibitin 3 ) HSP 1 Score: 164.1 bits (414), Expect = 1.9e-40 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 0
BLAST of Csor.00g311010 vs. TAIR 10
Match: AT5G14300.1 (prohibitin 5 ) HSP 1 Score: 142.5 bits (358), Expect = 5.9e-34 Identity = 90/208 (43.27%), Postives = 120/208 (57.69%), Query Frame = 0
BLAST of Csor.00g311010 vs. TAIR 10
Match: AT2G20530.1 (prohibitin 6 ) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-25 Identity = 72/208 (34.62%), Postives = 110/208 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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