Csor.00g310990 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g310990
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	scarecrow-like protein 8
Location	Csor_Chr10: 10561793 .. 10562322 (-)
RNA-Seq Expression	Csor.00g310990
Synteny	Csor.00g310990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGAGGTAGTTCTCTGTAGAGATTAGCATAGTACATGGTTTTCGCTCTAAAATCGTGGATAAATCTAATGGAATTTTTGCCACCTATGGTGTAGATTTTCGGCAATGAACATTCGGCAGCGACTCAGTCGCTTTACGATATTTCTGGTTGCTTTAAGCTTGCTTTCATGGCTACGAATCTCGCGATTCTTGAGGCTATAAAGGAAGATGATCGAAAACTACACGGTGTGGATTTTAATATCAGGAAGGGAGGTCAGCATATGAATCTAATCCCCCTTCTCTTAGGTCATCAGGAAGAGAAGGTTGTCATGAAATTGACGGCGGTTGTGGCGGACAACGGTGGAGATGAGAGGTTAAAAAAGGTCGGCGAGTCACCGAGTCAGCTGGCAAAAGAACACGATGTTGGGTTCAAATTCAACATGGTGAAAATGGAACTAGCAGAGATGATGTGCGAGTCACTCGGGTGCGATGGAGATGAATCATTAGTAGTGAATTTTGCTTTTAAGTTGTATCAGATGCTGGACTAG

mRNA sequence

ATGCGAGAGATTTTCGGCAATGAACATTCGGCAGCGACTCAGTCGCTTTACGATATTTCTGGTTGCTTTAAGCTTGCTTTCATGGCTACGAATCTCGCGATTCTTGAGGCTATAAAGGAAGATGATCGAAAACTACACGGTGTGGATTTTAATATCAGGAAGGGAGGTCAGCATATGAATCTAATCCCCCTTCTCTTAGGTCATCAGGAAGAGAAGGTTGTCATGAAATTGACGGCGGTTGTGGCGGACAACGGTGGAGATGAGAGGTTAAAAAAGGTCGGCGAGTCACCGAGTCAGCTGGCAAAAGAACACGATGTTGGGTTCAAATTCAACATGGTGAAAATGGAACTAGCAGAGATGATGTGCGAGTCACTCGGGTGCGATGGAGATGAATCATTAGTAGTGAATTTTGCTTTTAAGTTGTATCAGATGCTGGACTAG

Coding sequence (CDS)

ATGCGAGAGATTTTCGGCAATGAACATTCGGCAGCGACTCAGTCGCTTTACGATATTTCTGGTTGCTTTAAGCTTGCTTTCATGGCTACGAATCTCGCGATTCTTGAGGCTATAAAGGAAGATGATCGAAAACTACACGGTGTGGATTTTAATATCAGGAAGGGAGGTCAGCATATGAATCTAATCCCCCTTCTCTTAGGTCATCAGGAAGAGAAGGTTGTCATGAAATTGACGGCGGTTGTGGCGGACAACGGTGGAGATGAGAGGTTAAAAAAGGTCGGCGAGTCACCGAGTCAGCTGGCAAAAGAACACGATGTTGGGTTCAAATTCAACATGGTGAAAATGGAACTAGCAGAGATGATGTGCGAGTCACTCGGGTGCGATGGAGATGAATCATTAGTAGTGAATTTTGCTTTTAAGTTGTATCAGATGCTGGACTAG

Protein sequence

MREIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDGDESLVVNFAFKLYQMLD

Homology

[Close]

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot
Match: Q9FYR7 (Scarecrow-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SCL8 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-27
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKL---HGVDFNIRKGGQHM 62
           E++G EH  +TQ LY++S CFKL F A NLAIL+A   +D  +   H +DF+I +GGQ++
Sbjct: 323 ELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYV 382

Query: 63  NLIPLL------LGHQEEKVVMKLTAV-------VADNGGDERLKKVGESPSQLAKEHDV 122
           NL+  L          +   V+K+TAV       + D+GG+ERLK VG+  SQL     +
Sbjct: 383 NLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGI 442

Query: 123 GFKFNMV-KMELAEMMCESLGCDGDESLVVNFAFKLYQMLD 147
              FN+V  + L ++  ESLGCD DE+L VN AFKLY++ D
Sbjct: 443 SVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPD 483

[Close]

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot
Match: Q9SDQ3 (Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-17
Identity = 54/146 (36.99%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 7   NEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLL 66
           +E  AA Q L+++  CFK  F+A N AILEAIK ++ ++H +DF+I +G Q+M LI  + 
Sbjct: 293 DERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEE-EVHIIDFDINQGNQYMTLIRSIA 352

Query: 67  GHQEEKVVMKLT------AVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM 126
               ++  ++LT      +V    GG   L+ +G    QLA+++ V FKF  +  + + +
Sbjct: 353 ELPGKRPRLRLTGIDDPESVQRSIGG---LRIIGLRLEQLAEDNGVSFKFKAMPSKTSIV 412

Query: 127 MCESLGCDGDESLVVNFAFKLYQMLD 147
              +LGC   E+L+VNFAF+L+ M D
Sbjct: 413 SPSTLGCKPGETLIVNFAFQLHHMPD 434

[Close]

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot
Match: Q9LDL7 (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 16  LYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVVM 75
           LY++   FK  +M+ N AI EA+KE++R +H +DF I +G Q + LI            +
Sbjct: 200 LYEVCPYFKFGYMSANGAIAEAMKEENR-VHIIDFQIGQGSQWVTLIQAFAARPGGPPRI 259

Query: 76  KLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDG 135
           ++T +       A  GG   L  VG   ++LAK+ +V F+FN V + ++E+  ++LG   
Sbjct: 260 RITGIDDMTSAYARGGG---LSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRP 319

Query: 136 DESLVVNFAFKLYQMLD 147
            E+L VNFAF L+ M D
Sbjct: 320 GEALAVNFAFVLHHMPD 332

[Close]

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot
Match: Q9M0M5 (Scarecrow-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=SCL13 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 6   GNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLL 65
           G E  +    LY+I   +K A+   N+ ILEAI  + R +H +DF I +G Q+M LI  L
Sbjct: 225 GRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETR-VHIIDFQIAQGSQYMFLIQEL 284

Query: 66  LGHQEEKVVMKLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAE 125
                   ++++T V       A  GG   L  VGE  + LA+   V F+F+   M   +
Sbjct: 285 AKRPGGPPLLRVTGVDDSQSTYARGGG---LSLVGERLATLAQSCGVPFEFHDAIMSGCK 344

Query: 126 MMCESLGCDGDESLVVNFAFKLYQMLD 147
           +  E LG +   ++VVNF + L+ M D
Sbjct: 345 VQREHLGLEPGFAVVVNFPYVLHHMPD 367

[Close]

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot
Match: Q8GVE1 (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-09
Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 16  LYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVVM 75
           LY+    FK  +M+ N AI EA+K +DR +H +DF+I +G Q ++L+  L         +
Sbjct: 254 LYEACPYFKFGYMSANGAIAEAVKGEDR-IHIIDFHISQGAQWISLLQALAARPGGPPTV 313

Query: 76  KLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDG 135
           ++T +       A  GG   L+ VG   S +A    V F+F+ + +  +++    LG   
Sbjct: 314 RITGIDDSVSAYARGGG---LELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIP 373

Query: 136 DESLVVNFAFKLYQMLD 147
            E+L VNF  +L+ + D
Sbjct: 374 GEALAVNFTLELHHIPD 386

[Close]

BLAST of Csor.00g310990 vs. NCBI nr
Match: KAG6590435.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295 bits (754), Expect = 1.30e-100
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MREIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMN 60
           MREIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMN
Sbjct: 1   MREIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMN 60

Query: 61  LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM 120
           LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM
Sbjct: 61  LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM 120

Query: 121 MCESLGCDGDESLVVNFAFKLYQMLD 146
           MCESLGCDGDESLVVNFAFKLYQMLD
Sbjct: 121 MCESLGCDGDESLVVNFAFKLYQMLD 146

[Close]

BLAST of Csor.00g310990 vs. NCBI nr
Match: KAG6590429.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276 bits (707), Expect = 1.92e-93
Identity = 136/146 (93.15%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MREIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMN 60
           MREIFGNEHS AT SLYD+SGCFKLAF+A NLAILEAI+EDDRKLHGVDFNIRKGGQHMN
Sbjct: 1   MREIFGNEHSVATHSLYDVSGCFKLAFIAMNLAILEAIEEDDRKLHGVDFNIRKGGQHMN 60

Query: 61  LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM 120
           LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGES SQLAKEHDVGFKFNMVKMELAEM
Sbjct: 61  LIPLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESQSQLAKEHDVGFKFNMVKMELAEM 120

Query: 121 MCESLGCDGDESLVVNFAFKLYQMLD 146
           MC+SL CDGDESLVVNF+FKLYQMLD
Sbjct: 121 MCKSLRCDGDESLVVNFSFKLYQMLD 146

[Close]

BLAST of Csor.00g310990 vs. NCBI nr
Match: KAG6590434.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (583), Expect = 7.19e-75
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 15  SLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVV 74
           ++  +SGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGG HMNLIPLLLGHQEEKVV
Sbjct: 2   NIRHVSGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGHHMNLIPLLLGHQEEKVV 61

Query: 75  MKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDGDESLV 134
           MKLTAVVADNGGDERLKKVGES SQLAKEHDVGFKFNMVKMELAEMMCESLGCDGDESLV
Sbjct: 62  MKLTAVVADNGGDERLKKVGESQSQLAKEHDVGFKFNMVKMELAEMMCESLGCDGDESLV 121

[Close]

BLAST of Csor.00g310990 vs. NCBI nr
Match: KAG6590427.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (564), Expect = 2.27e-71
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 13  TQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEK 72
           TQSLYD+SGCFKLAFMATNLAILEAI++DDRKLHGVDFNIRKGGQHMNLIPLLLG QEEK
Sbjct: 47  TQSLYDVSGCFKLAFMATNLAILEAIEKDDRKLHGVDFNIRKGGQHMNLIPLLLGQQEEK 106

Query: 73  VVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDGDE 131
           VVMKLTAVVADNGG ERLKKVG+S SQL KEHDVG +FNMVKMELAEMMCESLGCDGDE
Sbjct: 107 VVMKLTAVVADNGGYERLKKVGKSQSQLVKEHDVGLEFNMVKMELAEMMCESLGCDGDE 165

[Close]

BLAST of Csor.00g310990 vs. NCBI nr
Match: KAG6590431.1 (Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211 bits (538), Expect = 5.92e-68
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 15  SLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVV 74
           ++  +SGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGG HMNLIPLLLGHQEEKVV
Sbjct: 2   NIRHVSGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGHHMNLIPLLLGHQEEKVV 61

Query: 75  MKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLG 126
           MKLTAVVADNGGDERLKKVGES SQLAKEHDVGFKFNMVKMELAEMMCESLG
Sbjct: 62  MKLTAVVADNGGDERLKKVGESQSQLAKEHDVGFKFNMVKMELAEMMCESLG 113

[Close]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL
Match: A0A6J1HE03 (scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111462012 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 1.19e-65
Identity = 111/143 (77.62%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 4   IFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIP 63
           IFGNEHSAATQSLY +SGCFKLAFMAT+LAILEAIKEDDRKLHGVDFNIRKG        
Sbjct: 191 IFGNEHSAATQSLYYVSGCFKLAFMATSLAILEAIKEDDRKLHGVDFNIRKG-------- 250

Query: 64  LLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCE 123
                              DNGGDERLKKVGES SQLAKE+DVGFKFNMVKMELAEMMCE
Sbjct: 251 -------------------DNGGDERLKKVGESQSQLAKEYDVGFKFNMVKMELAEMMCE 306

Query: 124 SLGCDGDESLVVNFAFKLYQMLD 146
           SLGCDGDESLVVNFAFKLYQMLD
Sbjct: 311 SLGCDGDESLVVNFAFKLYQMLD 306

[Close]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL
Match: A0A6J1K574 (scarecrow-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490861 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.65e-65
Identity = 114/144 (79.17%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLI 62
           EIFG+EHSAATQSLYD+S CFKLAFMA NLAILEAI+E+DRKLH VDF+I KGGQ+MNLI
Sbjct: 299 EIFGDEHSAATQSLYDVSPCFKLAFMAANLAILEAIEEEDRKLHVVDFDIGKGGQYMNLI 358

Query: 63  PLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMC 122
            LL G Q+ KVV+KLTAVVA+NG DERLK+VGES SQLAKE  VGFKFNMVK ELA +  
Sbjct: 359 HLLSGRQKGKVVVKLTAVVAENGRDERLKQVGESLSQLAKELGVGFKFNMVKHELAALTR 418

Query: 123 ESLGCDGDESLVVNFAFKLYQMLD 146
           ESLGCD DESL VNFAFKLYQM D
Sbjct: 419 ESLGCDADESLAVNFAFKLYQMPD 442

[Close]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL
Match: A0A6J1H2B4 (scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111459386 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 8.98e-65
Identity = 113/144 (78.47%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLI 62
           EIFG+EHSAATQSLYD+S CFKLAFMA NLAILEAI+E+DRKLH VDF+I KGGQ+MNLI
Sbjct: 299 EIFGDEHSAATQSLYDVSPCFKLAFMAANLAILEAIEEEDRKLHIVDFDIGKGGQYMNLI 358

Query: 63  PLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMC 122
            LL G Q+ KVV+KLTAVVA+NG DERLK VGES SQLAKE  VGFKFNMVK E +E+  
Sbjct: 359 HLLSGRQKGKVVVKLTAVVAENGRDERLKHVGESLSQLAKELGVGFKFNMVKQEPSELTR 418

Query: 123 ESLGCDGDESLVVNFAFKLYQMLD 146
           ESLGCD DESL VNFAFKLYQM D
Sbjct: 419 ESLGCDADESLAVNFAFKLYQMPD 442

[Close]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL
Match: A0A0A0KK19 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140530 PE=3 SV=1)

HSP 1 Score: 199 bits (506), Expect = 4.72e-58
Identity = 103/144 (71.53%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLI 62
           EI+G+EHSAATQ LYD+S CFKLAFMA NLAILEAI E+DRKLH VDF+I KGGQ+MNLI
Sbjct: 295 EIYGDEHSAATQLLYDVSPCFKLAFMAANLAILEAIGEEDRKLHVVDFDIGKGGQYMNLI 354

Query: 63  PLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMC 122
            LL G Q+ KV +KLTAVV +NGGDE LK VGES +QLA E  VGF FN+V+ +LAE+  
Sbjct: 355 HLLSGRQKGKVTVKLTAVVTENGGDESLKLVGESLTQLANELGVGFNFNIVRHKLAELTR 414

Query: 123 ESLGCDGDESLVVNFAFKLYQMLD 146
           ESLGC+ DESL VNFAFKLY+M D
Sbjct: 415 ESLGCELDESLAVNFAFKLYRMPD 438

[Close]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL
Match: A0A5A7TML4 (Scarecrow-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00990 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.30e-57
Identity = 102/144 (70.83%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLI 62
           EI+G+EHSAATQ LYD+S CFKLAFMA NLAILEAI E+DRKLH VDF+I KGGQ+MNLI
Sbjct: 295 EIYGDEHSAATQLLYDVSPCFKLAFMAANLAILEAIGEEDRKLHVVDFDIGKGGQYMNLI 354

Query: 63  PLLLGHQEEKVVMKLTAVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMC 122
            LL G Q+ KV +KLTAVV +NGGDE LK VGES +QLA E  VGF FN+V+ +L+E+  
Sbjct: 355 HLLSGRQKGKVTVKLTAVVTENGGDESLKLVGESLTQLANELGVGFNFNIVRHKLSELTR 414

Query: 123 ESLGCDGDESLVVNFAFKLYQMLD 146
           ESLGC+ DESL VNFAFKLY+M D
Sbjct: 415 ESLGCELDESLAVNFAFKLYRMPD 438

[Close]

BLAST of Csor.00g310990 vs. TAIR 10
Match: AT5G52510.1 (SCARECROW-like 8 )

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-28
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0


Query: 3   EIFGNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKL---HGVDFNIRKGGQHM 62
           E++G EH  +TQ LY++S CFKL F A NLAIL+A   +D  +   H +DF+I +GGQ++
Sbjct: 323 ELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIGEGGQYV 382

Query: 63  NLIPLL------LGHQEEKVVMKLTAV-------VADNGGDERLKKVGESPSQLAKEHDV 122
           NL+  L          +   V+K+TAV       + D+GG+ERLK VG+  SQL     +
Sbjct: 383 NLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQLGDRLGI 442

Query: 123 GFKFNMV-KMELAEMMCESLGCDGDESLVVNFAFKLYQMLD 147
              FN+V  + L ++  ESLGCD DE+L VN AFKLY++ D
Sbjct: 443 SVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPD 483

[Close]

BLAST of Csor.00g310990 vs. TAIR 10
Match: AT1G21450.1 (SCARECROW-like 1 )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 54/146 (36.99%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 7   NEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLL 66
           +E  AA Q L+++  CFK  F+A N AILEAIK ++ ++H +DF+I +G Q+M LI  + 
Sbjct: 293 DERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEE-EVHIIDFDINQGNQYMTLIRSIA 352

Query: 67  GHQEEKVVMKLT------AVVADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEM 126
               ++  ++LT      +V    GG   L+ +G    QLA+++ V FKF  +  + + +
Sbjct: 353 ELPGKRPRLRLTGIDDPESVQRSIGG---LRIIGLRLEQLAEDNGVSFKFKAMPSKTSIV 412

Query: 127 MCESLGCDGDESLVVNFAFKLYQMLD 147
              +LGC   E+L+VNFAF+L+ M D
Sbjct: 413 SPSTLGCKPGETLIVNFAFQLHHMPD 434

[Close]

BLAST of Csor.00g310990 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 16  LYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVVM 75
           LY++   FK  +M+ N AI EA+KE++R +H +DF I +G Q + LI            +
Sbjct: 200 LYEVCPYFKFGYMSANGAIAEAMKEENR-VHIIDFQIGQGSQWVTLIQAFAARPGGPPRI 259

Query: 76  KLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDG 135
           ++T +       A  GG   L  VG   ++LAK+ +V F+FN V + ++E+  ++LG   
Sbjct: 260 RITGIDDMTSAYARGGG---LSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRP 319

Query: 136 DESLVVNFAFKLYQMLD 147
            E+L VNFAF L+ M D
Sbjct: 320 GEALAVNFAFVLHHMPD 332

[Close]

BLAST of Csor.00g310990 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 16  LYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLLLGHQEEKVVM 75
           LY++   FK  +M+ N AI EA+KE++R +H +DF I +G Q + LI            +
Sbjct: 200 LYEVCPYFKFGYMSANGAIAEAMKEENR-VHIIDFQIGQGSQWVTLIQAFAARPGGPPRI 259

Query: 76  KLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAEMMCESLGCDG 135
           ++T +       A  GG   L  VG   ++LAK+ +V F+FN V + ++E+  ++LG   
Sbjct: 260 RITGIDDMTSAYARGGG---LSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRP 319

Query: 136 DESLVVNFAFKLYQMLD 147
            E+L VNFAF L+ M D
Sbjct: 320 GEALAVNFAFVLHHMPD 332

[Close]

BLAST of Csor.00g310990 vs. TAIR 10
Match: AT4G17230.1 (SCARECROW-like 13 )

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-11
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 6   GNEHSAATQSLYDISGCFKLAFMATNLAILEAIKEDDRKLHGVDFNIRKGGQHMNLIPLL 65
           G E  +    LY+I   +K A+   N+ ILEAI  + R +H +DF I +G Q+M LI  L
Sbjct: 225 GRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETR-VHIIDFQIAQGSQYMFLIQEL 284

Query: 66  LGHQEEKVVMKLTAV------VADNGGDERLKKVGESPSQLAKEHDVGFKFNMVKMELAE 125
                   ++++T V       A  GG   L  VGE  + LA+   V F+F+   M   +
Sbjct: 285 AKRPGGPPLLRVTGVDDSQSTYARGGG---LSLVGERLATLAQSCGVPFEFHDAIMSGCK 344

Query: 126 MMCESLGCDGDESLVVNFAFKLYQMLD 147
           +  E LG +   ++VVNF + L+ M D
Sbjct: 345 VQREHLGLEPGFAVVVNFPYVLHHMPD 367

The following BLAST results are available for this feature:

BLAST of Csor.00g310990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYR7	3.1e-27	43.48	Scarecrow-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SCL8 PE=2 SV=1	[more]
Q9SDQ3	2.9e-17	36.99	Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1	[more]
Q9LDL7	1.5e-13	35.77	Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1...	[more]
Q9M0M5	7.6e-10	33.33	Scarecrow-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=SCL13 PE=2 SV=2	[more]
Q8GVE1	6.4e-09	30.66	Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonic...	[more]

BLAST of Csor.00g310990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590435.1	1.30e-100	100.00	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590429.1	1.92e-93	93.15	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590434.1	7.19e-75	94.17	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590427.1	2.27e-71	91.60	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590431.1	5.92e-68	93.75	Scarecrow-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Csor.00g310990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HE03	1.19e-65	77.62	scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111462012 PE=4 SV=1	[more]
A0A6J1K574	1.65e-65	79.17	scarecrow-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111490861 PE=3 SV=1	[more]
A0A6J1H2B4	8.98e-65	78.47	scarecrow-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111459386 PE=3 SV=1	[more]
A0A0A0KK19	4.72e-58	71.53	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G140530 PE=3 S...	[more]
A0A5A7TML4	1.30e-57	70.83	Scarecrow-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Csor.00g310990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52510.1	2.2e-28	43.48	SCARECROW-like 8	[more]
AT1G21450.1	2.0e-18	36.99	SCARECROW-like 1	[more]
AT5G48150.1	1.1e-14	35.77	GRAS family transcription factor	[more]
AT5G48150.2	1.1e-14	35.77	GRAS family transcription factor	[more]
AT4G17230.1	5.4e-11	33.33	SCARECROW-like 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 7..145 e-value: 9.2E-27 score: 93.9
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 3..144
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 1..146 score: 17.478054
IPR030013	Scarecrow-like protein 8	PANTHER	PTHR31636:SF221	SCARECROW-LIKE PROTEIN 8	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g310990.m01	Csor.00g310990.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding