Csor.00g310890 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAACAAGCACAAGAAATCTCACTCTTCCTTCTCCTTCTTTGGCTTCTTCAAATCAAAGAGGGCTCGAAAAGGAGAGCATTATGAGCACGACGAGCTCTCGTGCCCTAGAAAGGTGTGGCCGAGCGATGCAGACAAATGCCACCGTTGGGTTGCAGAGCCTGGCATCGACCGAAAAGCTAAAGATTACATCGACAGGATCCATCGTAACCGCGTGTTGGAAACCGAACGCCAAACTGTCACAGTTGCCCCTTCGGGAACTAGAACCGACGTGTAA ATGGGAGGCAACAAGCACAAGAAATCTCACTCTTCCTTCTCCTTCTTTGGCTTCTTCAAATCAAAGAGGGCTCGAAAAGGAGAGCATTATGAGCACGACGAGCTCTCGTGCCCTAGAAAGGTGTGGCCGAGCGATGCAGACAAATGCCACCGTTGGGTTGCAGAGCCTGGCATCGACCGAAAAGCTAAAGATTACATCGACAGGATCCATCGTAACCGCGTGTTGGAAACCGAACGCCAAACTGTCACAGTTGCCCCTTCGGGAACTAGAACCGACGTGTAA ATGGGAGGCAACAAGCACAAGAAATCTCACTCTTCCTTCTCCTTCTTTGGCTTCTTCAAATCAAAGAGGGCTCGAAAAGGAGAGCATTATGAGCACGACGAGCTCTCGTGCCCTAGAAAGGTGTGGCCGAGCGATGCAGACAAATGCCACCGTTGGGTTGCAGAGCCTGGCATCGACCGAAAAGCTAAAGATTACATCGACAGGATCCATCGTAACCGCGTGTTGGAAACCGAACGCCAAACTGTCACAGTTGCCCCTTCGGGAACTAGAACCGACGTGTAA MGGNKHKKSHSSFSFFGFFKSKRARKGEHYEHDELSCPRKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVLETERQTVTVAPSGTRTDV Homology
BLAST of Csor.00g310890 vs. NCBI nr
Match: KAG6588556.1 (hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (501), Expect = 1.01e-63 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Csor.00g310890 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus]) HSP 1 Score: 145 bits (367), Expect = 3.26e-43 Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of Csor.00g310890 vs. NCBI nr
Match: KAG6590516.1 (hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142 bits (358), Expect = 7.45e-42 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0
BLAST of Csor.00g310890 vs. NCBI nr
Match: KGN65989.1 (hypothetical protein Csa_006868 [Cucumis sativus]) HSP 1 Score: 138 bits (347), Expect = 3.88e-40 Identity = 71/98 (72.45%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of Csor.00g310890 vs. NCBI nr
Match: KGN45868.1 (hypothetical protein Csa_004803 [Cucumis sativus]) HSP 1 Score: 135 bits (339), Expect = 5.21e-39 Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Csor.00g310890 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 145 bits (367), Expect = 1.58e-43 Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of Csor.00g310890 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 145 bits (365), Expect = 3.19e-43 Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of Csor.00g310890 vs. ExPASy TrEMBL
Match: A0A0A0LY99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560730 PE=4 SV=1) HSP 1 Score: 138 bits (347), Expect = 1.88e-40 Identity = 71/98 (72.45%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of Csor.00g310890 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1) HSP 1 Score: 135 bits (339), Expect = 2.52e-39 Identity = 66/89 (74.16%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Csor.00g310890 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 132 bits (332), Expect = 3.52e-38 Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 0
BLAST of Csor.00g310890 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Csor.00g310890 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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