Csor.00g308960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g308960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH118-like
Location	Csor_Chr15: 9353658 .. 9354474 (+)
RNA-Seq Expression	Csor.00g308960
Synteny	Csor.00g308960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCAATATTGAATCACCATTTTCATTTGATTTGGGAGATGAACTCTTCCCTCTCCCTTCAATTTCTTCATGCATAGATAATATCTCTGTTCCTCAGTTCCCCTCCATCTCTCCCTTGGAGAATGATAAGAGTGCGTCCAAAAGGCCCAAAAGAAGCAGCCGGAGAAACCCACCGCCCAACGCTTCCAACGATGAGAACCCCAACGACCAAAAAAGGAAGAAGATATTGCATAGAGATGTGGAGCGCCAAAGGAGACAAGAAATGTCCTCTCTTTACTCCTCTCTTCGCTCTCTTCTCCCTCTTGAATACCTCAAGGTACCATTTTCTTCGATGGGTTATGTTCTTTTTCACAAATTAACCTTCTTTCTTTTGTTGTAGGGTAAGCGCTCCATATCTGACCACATGCATGAAACGGTTAAGTACATTCAATATTATTCAGACAAGAATCCAGCAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTCTCCGGCGAGAATATGGCCGTCGGTACAGGGGAAACGCTGAATTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCGAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAGTCTCTGACGTTATTCGAGTTTTAGCCGTCGAAGGGCTTGAAATTCTGAGTTGCATTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCAAGCTTCAGCATAAGTTAATCAATTTAGAATATGTTCCTTTAGATTAG

mRNA sequence

ATGGAATTCAATATTGAATCACCATTTTCATTTGATTTGGGAGATGAACTCTTCCCTCTCCCTTCAATTTCTTCATGCATAGATAATATCTCTGTTCCTCAGTTCCCCTCCATCTCTCCCTTGGAGAATGATAAGAGTGCGTCCAAAAGGCCCAAAAGAAGCAGCCGGAGAAACCCACCGCCCAACGCTTCCAACGATGAGAACCCCAACGACCAAAAAAGGAAGAAGATATTGCATAGAGATGTGGAGCGCCAAAGGAGACAAGAAATGTCCTCTCTTTACTCCTCTCTTCGCTCTCTTCTCCCTCTTGAATACCTCAAGACAAGAATCCAGCAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTCTCCGGCGAGAATATGGCCGTCGGTACAGGGGAAACGCTGAATTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCGAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAGTCTCTGACGTTATTCGAGTTTTAGCCGTCGAAGGGCTTGAAATTCTGAGTTGCATTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCAAGCTTCAGCATAAGTTAATCAATTTAGAATATGTTCCTTTAGATTAG

Coding sequence (CDS)

ATGGAATTCAATATTGAATCACCATTTTCATTTGATTTGGGAGATGAACTCTTCCCTCTCCCTTCAATTTCTTCATGCATAGATAATATCTCTGTTCCTCAGTTCCCCTCCATCTCTCCCTTGGAGAATGATAAGAGTGCGTCCAAAAGGCCCAAAAGAAGCAGCCGGAGAAACCCACCGCCCAACGCTTCCAACGATGAGAACCCCAACGACCAAAAAAGGAAGAAGATATTGCATAGAGATGTGGAGCGCCAAAGGAGACAAGAAATGTCCTCTCTTTACTCCTCTCTTCGCTCTCTTCTCCCTCTTGAATACCTCAAGACAAGAATCCAGCAACTGTCTGATCAAAGAGATGACCTGAAAAGCCTCTCCGGCGAGAATATGGCCGTCGGTACAGGGGAAACGCTGAATTCCTCACGGAGGGATTCAGTGGTGGTGAGGTCGAAAAATGGATTAGGAATTCAAGTTGTTTTAGACACAGCCACCCAACATAGGCTCCCAGTCTCTGACGTTATTCGAGTTTTAGCCGTCGAAGGGCTTGAAATTCTGAGTTGCATTACGACCAAAGTAAATGAGAGGTACCTTCATACCATTGAATGCCAAATTGTTGACAATGATGGCTGCTATCCAAGCATCGATGTGTCCAAGCTTCAGCATAAGTTAATCAATTTAGAATATGTTCCTTTAGATTAG

Protein sequence

MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPPPNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKTRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLEYVPLD

Homology

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BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot
Match: Q9STJ6 (Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 71/215 (33.02%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 44  DKSASKRPKRSSRRNPPPNASND----------ENPNDQKRKKILHRDVERQRRQEMSSL 103
           D   +  PK   R+ P  +A             E  +++K+KK+LHRD+ERQRRQEM++L
Sbjct: 2   DPYKNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATL 61

Query: 104 YSSLRSLLPLEYLK--------------------TRIQQLSDQRDDLKSLSGENMAVG-- 163
           +++LR+ LPL+Y+K                     RI++LS +RD+L   +G+       
Sbjct: 62  FATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPD 121

Query: 164 ---TGETLNSSRRDSVVVRSK-NGLGIQVVLDTATQHRLPVSDVIRVLAVEGLEILSCIT 223
              TG  +  S   +V+V+   +GL + V  +++    LP+S V+  +  +GLE++S  T
Sbjct: 122 PGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFT 181

[Close]

BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot
Match: Q9FLI0 (Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 72/199 (36.18%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 48  SKRPKRSSRRNPPPNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK 107
           S  PK++  ++  P     E    +K KK+LHR++ERQRRQEM+ L++SLRS LPL+Y+K
Sbjct: 4   SNNPKKTRHQSHMP----QERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIK 63

Query: 108 --------------------TRIQQLSDQRDDLKSLSGENMAV-GTGETLNSSRRDSVVV 167
                               TRI+ LS +RD+LK   G+  ++ G+G    SSR +   V
Sbjct: 64  GKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASV 123

Query: 168 RSKNGL-GIQVVLDTATQ--HRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIV 223
             +  + G +VV+ +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++ 
Sbjct: 124 MVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVN 183

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BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot
Match: Q9STJ7 (Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.0e-14
Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 75  KKILHRDVERQRRQEMSSLYSSLRSLLPLE--------------------YLKTRIQQLS 134
           +K++H+++E++RRQEM+SLY+SLRSLLPLE                    YL+  I+ ++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 135 DQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRV 194
            +RDDL  LSG +      +  N    + VV+R    +GI++VL      + P S V++V
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEI-SNHVVIRPCL-VGIEIVLSIL---QTPFSSVLQV 121

Query: 195 LAVEGLEILSCITTKVNERYLHTIECQIVD 205
           L   GL +L  I + VN+R +HT++ ++ D
Sbjct: 122 LREHGLYVLGYICSSVNDRLIHTLQAEVND 146

[Close]

BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13
Identity = 58/179 (32.40%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 75  KKILHRDVERQRRQEMSSLYSSLRSLLPL--------------------EYLKTRIQQLS 134
           +K++HR+ ERQRRQEM+SLY+SLRSLLPL                    +YL+ +I++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 135 DQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNG-------LGIQVVLDTATQHRLP 194
            +RDDL  LS  ++    G +    + D  ++  KN        +G++++L +      P
Sbjct: 62  VRRDDLMVLSRGSL---LGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP 121

Query: 195 -VSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLE 226
             S V++VL+  GL +L+ I++ V++R ++TI+ ++ D       ID+++L+ +LI ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVND---MALMIDLAELEKRLIRMK 174

[Close]

BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot
Match: Q9LN95 (Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.1e-10
Identity = 55/186 (29.57%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 70  NDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK--------------------TR 129
           ++ K K+  H+++ERQRRQE +SL+  LR LLP +Y+K                     +
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 130 IQQLSDQRDDLK------SLSGE----NMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLD 189
           I+++S++RD +K      S  GE    ++A  T   +  +   +VVVR    +G+++V+ 
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDT-NIAVVVRPCL-IGLEIVVS 189

Query: 190 TATQHRLPVSDVIRVLAVEG-LEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQ 225
              +H   +S V+++LA E    I+SCI+T++++ ++HTI  ++ +    Y     S+LQ
Sbjct: 190 CCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVY----FSELQ 249

[Close]

BLAST of Csor.00g308960 vs. NCBI nr
Match: KAG6579463.1 (Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 440 bits (1131), Expect = 2.55e-155
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP
Sbjct: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKTRIQQLSDQRDDL 120
           PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKTRIQQLSDQRDDL
Sbjct: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKTRIQQLSDQRDDL 120

Query: 121 KSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRVLAVEGL 180
           KSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRVLAVEGL
Sbjct: 121 KSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRVLAVEGL 180

Query: 181 EILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLEYVPLD 230
           EILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLEYVPLD
Sbjct: 181 EILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLEYVPLD 230

[Close]

BLAST of Csor.00g308960 vs. NCBI nr
Match: XP_022922335.1 (transcription factor bHLH118-like [Cucurbita moschata])

HSP 1 Score: 384 bits (985), Expect = 8.93e-133
Identity = 208/250 (83.20%), Postives = 220/250 (88.00%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESP SFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP
Sbjct: 1   MEFNIESPISFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PNASNDENPNDQKRKKI+HRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNASNDENPNDQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKPSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                   RI+QLSD+RD+LK+LSGENMAVG  ETLNSSRRDSVVVRSKNGLGIQVVLDT
Sbjct: 121 KYIQYMQRRIRQLSDKRDELKNLSGENMAVGMVETLNSSRRDSVVVRSKNGLGIQVVLDT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
            TQHRLPVS+++RVLAVEGLEILSCIT KVNERYLHTIECQ V++DG YPSIDV +LQHK
Sbjct: 181 TTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ-VESDGFYPSIDVCELQHK 240

[Close]

BLAST of Csor.00g308960 vs. NCBI nr
Match: KAG6579462.1 (Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373 bits (958), Expect = 1.20e-128
Identity = 205/251 (81.67%), Postives = 218/251 (86.85%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESPFSFD+GDELFPLPSISSCI NISVPQFPSI PL+N KSASKRPKRSSRRNPP
Sbjct: 1   MEFNIESPFSFDMGDELFPLPSISSCIHNISVPQFPSIPPLDNGKSASKRPKRSSRRNPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                   RI+QLSD+RD+LK+LSGENMAVG  ETLNSSRRDSVVVRSKNGLGIQVVLDT
Sbjct: 121 KYIQYMQRRIRQLSDKRDELKNLSGENMAVGMVETLNSSRRDSVVVRSKNGLGIQVVLDT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
            +QHRLPVS+++RVLAVEGLEILSCITTKVNERYLH IECQ V+NDG YPSIDV +LQHK
Sbjct: 181 TSQHRLPVSNILRVLAVEGLEILSCITTKVNERYLHKIECQ-VENDGFYPSIDVCELQHK 240

[Close]

BLAST of Csor.00g308960 vs. NCBI nr
Match: XP_022969885.1 (transcription factor bHLH120-like [Cucurbita maxima])

HSP 1 Score: 329 bits (843), Expect = 2.28e-111
Identity = 180/250 (72.00%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESPFSF+ GDELFPLP IS               PLEN   ASK+PK  SRR PP
Sbjct: 1   MEFNIESPFSFEFGDELFPLPPIS---------------PLENTNIASKKPKTCSRRQPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PN SNDENPN+QKRKKI+HRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNTSNDENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                  TRIQQLS+QRD+LKSLSGENM VG  ETLNSSRRDSVVV S NGLGIQVVLDT
Sbjct: 121 KYIQSIQTRIQQLSNQRDELKSLSGENMPVGAVETLNSSRRDSVVVSSTNGLGIQVVLDT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
           A QHRLPVSD+++VL  EGLEI+SCITTKVNERYLHTIECQ+V+NDGCYPSIDV +L+H+
Sbjct: 181 AIQHRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQVVENDGCYPSIDVFELRHQ 235

[Close]

BLAST of Csor.00g308960 vs. NCBI nr
Match: KAG6579464.1 (Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325 bits (833), Expect = 7.58e-110
Identity = 178/250 (71.20%), Postives = 196/250 (78.40%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESPFSFD GDELFPLP +S               PLEN   ASK+PK   RR PP
Sbjct: 1   MEFNIESPFSFDFGDELFPLPPLS---------------PLENKNIASKKPKACRRRKPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PN SNDENPN+QKRKKI+HRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNTSNDENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKCSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                  TRI+QLSDQRD+LKSLS ENMAVGT ETLNSSRRDSVVV SKN LGIQVVL T
Sbjct: 121 KYIQSIQTRIRQLSDQRDELKSLSNENMAVGTTETLNSSRRDSVVVSSKNELGIQVVLHT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
           ATQHR+PVS+++RVL  EGLEI+SCITTKVNERYLHTIEC++V+N+GCYPSI+V +L+HK
Sbjct: 181 ATQHRVPVSNILRVLVAEGLEIMSCITTKVNERYLHTIECKVVENNGCYPSINVFELEHK 235

[Close]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL
Match: A0A6J1E8G7 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 4.32e-133
Identity = 208/250 (83.20%), Postives = 220/250 (88.00%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESP SFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP
Sbjct: 1   MEFNIESPISFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PNASNDENPNDQKRKKI+HRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNASNDENPNDQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKPSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                   RI+QLSD+RD+LK+LSGENMAVG  ETLNSSRRDSVVVRSKNGLGIQVVLDT
Sbjct: 121 KYIQYMQRRIRQLSDKRDELKNLSGENMAVGMVETLNSSRRDSVVVRSKNGLGIQVVLDT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
            TQHRLPVS+++RVLAVEGLEILSCIT KVNERYLHTIECQ V++DG YPSIDV +LQHK
Sbjct: 181 TTQHRLPVSNILRVLAVEGLEILSCITIKVNERYLHTIECQ-VESDGFYPSIDVCELQHK 240

[Close]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL
Match: A0A6J1I182 (transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.10e-111
Identity = 180/250 (72.00%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           MEFNIESPFSF+ GDELFPLP IS               PLEN   ASK+PK  SRR PP
Sbjct: 1   MEFNIESPFSFEFGDELFPLPPIS---------------PLENTNIASKKPKTCSRRQPP 60

Query: 61  PNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK------------- 120
           PN SNDENPN+QKRKKI+HRDVERQRRQEMSSLYSSLRSLLPLEYLK             
Sbjct: 61  PNTSNDENPNEQKRKKIMHRDVERQRRQEMSSLYSSLRSLLPLEYLKGKRSISDHMHETV 120

Query: 121 -------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDT 180
                  TRIQQLS+QRD+LKSLSGENM VG  ETLNSSRRDSVVV S NGLGIQVVLDT
Sbjct: 121 KYIQSIQTRIQQLSNQRDELKSLSGENMPVGAVETLNSSRRDSVVVSSTNGLGIQVVLDT 180

Query: 181 ATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHK 230
           A QHRLPVSD+++VL  EGLEI+SCITTKVNERYLHTIECQ+V+NDGCYPSIDV +L+H+
Sbjct: 181 AIQHRLPVSDILQVLIAEGLEIMSCITTKVNERYLHTIECQVVENDGCYPSIDVFELRHQ 235

[Close]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL
Match: A0A6J1K9B6 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 7.38e-83
Identity = 149/254 (58.66%), Postives = 192/254 (75.59%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           M  NI SPFS+DLG+ELFPLPS+S CID I VPQFPSISPL+++KS S++PK   R+NPP
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLS-CID-IPVPQFPSISPLDSNKSGSQKPKNGRRKNPP 60

Query: 61  PNASND---ENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK---------- 120
            N+S+D    NPN+ K+KKI+HRDVERQRRQ+M+SLY++LRSLLP EYLK          
Sbjct: 61  ANSSDDIGDMNPNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKRSICDHML 120

Query: 121 ----------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLG-IQV 180
                     +RIQ LS++RD+LK +S +N      ETL+SS+R+SV+VR++N  G +QV
Sbjct: 121 EAVKYIRHMQSRIQDLSNKRDELKRVSDKNPVATMVETLDSSKRESVLVRARNESGEVQV 180

Query: 181 VLDTATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSK 230
           VL+TATQH LPVS+++R LA EGLEILS I+TKVN+ ++HTIECQ + +    PSIDVS+
Sbjct: 181 VLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNHTPSIDVSE 240

[Close]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL
Match: A0A5A7TN30 (Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003200 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.79e-82
Identity = 147/255 (57.65%), Postives = 185/255 (72.55%), Query Frame = 0


Query: 3   FNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKS-ASKRPKRSSRRNPPP 62
           FN+ESPFSFDLG++L PLPS+ S   ++  P      PL+ND +  S++PK   R+ P P
Sbjct: 4   FNVESPFSFDLGEDLVPLPSLPS--SSVISP------PLDNDGNRVSQKPKNGRRKKPLP 63

Query: 63  NASND----ENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK---------- 122
           N  ND    EN ++QK+KKI+HRDVERQRRQEMSSLY++LRSLLPLEYLK          
Sbjct: 64  NTCNDDGGDENLDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQ 123

Query: 123 ----------TRIQQLSDQRDDLKSLSGENMAV-GTGETLNSSRRDSVVVRSKNGLGIQV 182
                      RIQQL D+RD L+ L+ + M + GT ETLNSS RDSVVVR+K+G+GIQV
Sbjct: 124 ETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQV 183

Query: 183 VLDTATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQ-IVDNDGCYPSIDVS 230
           VLDTAT+HRLP+S  ++ L  EGLEIL+CI+ ++NER++HTIECQ I+ +DGCYP+ID S
Sbjct: 184 VLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTIDAS 243

[Close]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL
Match: A0A6J1H558 (transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 PE=4 SV=1)

HSP 1 Score: 253 bits (645), Expect = 2.43e-81
Identity = 147/254 (57.87%), Postives = 190/254 (74.80%), Query Frame = 0


Query: 1   MEFNIESPFSFDLGDELFPLPSISSCIDNISVPQFPSISPLENDKSASKRPKRSSRRNPP 60
           M  NI SPFS+DLG+ELFPLPS+S CID I VPQFPSISPL+N+KS +++PK   R+ PP
Sbjct: 1   MNDNIGSPFSYDLGEELFPLPSLS-CID-IPVPQFPSISPLDNNKSGTQKPKNGRRKKPP 60

Query: 61  PNASND---ENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK---------- 120
            N+S+D    NPN+ K+KKI+HRDVERQRRQ+M+SLY++LRSLLP EYLK          
Sbjct: 61  ANSSDDIGDMNPNEHKKKKIMHRDVERQRRQDMASLYATLRSLLPHEYLKGKRSICDHML 120

Query: 121 ----------TRIQQLSDQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLG-IQV 180
                     +RIQ L ++RD+LK +S +N      ETL+SS+RDSV+VR++N  G +QV
Sbjct: 121 EAVKYIRHMQSRIQVLCNKRDELKRVSDKNPVATMVETLDSSKRDSVLVRARNESGGVQV 180

Query: 181 VLDTATQHRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSK 230
           VL+TATQH LPVS+++R LA EGLEILS I+TKVN+ ++HTIECQ + +    PSIDVS+
Sbjct: 181 VLNTATQHNLPVSNILRDLATEGLEILSYISTKVNDSFIHTIECQTLVDSNHTPSIDVSE 240

[Close]

BLAST of Csor.00g308960 vs. TAIR 10
Match: AT4G25410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 8.5e-19
Identity = 71/215 (33.02%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 44  DKSASKRPKRSSRRNPPPNASND----------ENPNDQKRKKILHRDVERQRRQEMSSL 103
           D   +  PK   R+ P  +A             E  +++K+KK+LHRD+ERQRRQEM++L
Sbjct: 2   DPYKNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATL 61

Query: 104 YSSLRSLLPLEYLK--------------------TRIQQLSDQRDDLKSLSGENMAVG-- 163
           +++LR+ LPL+Y+K                     RI++LS +RD+L   +G+       
Sbjct: 62  FATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPD 121

Query: 164 ---TGETLNSSRRDSVVVRSK-NGLGIQVVLDTATQHRLPVSDVIRVLAVEGLEILSCIT 223
              TG  +  S   +V+V+   +GL + V  +++    LP+S V+  +  +GLE++S  T
Sbjct: 122 PGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFT 181

[Close]

BLAST of Csor.00g308960 vs. TAIR 10
Match: AT5G51790.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 72/199 (36.18%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 48  SKRPKRSSRRNPPPNASNDENPNDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK 107
           S  PK++  ++  P     E    +K KK+LHR++ERQRRQEM+ L++SLRS LPL+Y+K
Sbjct: 4   SNNPKKTRHQSHMP----QERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIK 63

Query: 108 --------------------TRIQQLSDQRDDLKSLSGENMAV-GTGETLNSSRRDSVVV 167
                               TRI+ LS +RD+LK   G+  ++ G+G    SSR +   V
Sbjct: 64  GKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASV 123

Query: 168 RSKNGL-GIQVVLDTATQ--HRLPVSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIV 223
             +  + G +VV+ +        P+S V+ VL  +GLE++S +T +VNER ++TI+ ++ 
Sbjct: 124 MVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVEVN 183

[Close]

BLAST of Csor.00g308960 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-15
Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 75  KKILHRDVERQRRQEMSSLYSSLRSLLPLE--------------------YLKTRIQQLS 134
           +K++H+++E++RRQEM+SLY+SLRSLLPLE                    YL+  I+ ++
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 135 DQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLDTATQHRLPVSDVIRV 194
            +RDDL  LSG +      +  N    + VV+R    +GI++VL      + P S V++V
Sbjct: 62  SKRDDLVLLSGRSFRSSNEQEWNEI-SNHVVIRPCL-VGIEIVLSIL---QTPFSSVLQV 121

Query: 195 LAVEGLEILSCITTKVNERYLHTIECQIVD 205
           L   GL +L  I + VN+R +HT++ ++ D
Sbjct: 122 LREHGLYVLGYICSSVNDRLIHTLQAEVND 146

[Close]

BLAST of Csor.00g308960 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-14
Identity = 58/179 (32.40%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 75  KKILHRDVERQRRQEMSSLYSSLRSLLPL--------------------EYLKTRIQQLS 134
           +K++HR+ ERQRRQEM+SLY+SLRSLLPL                    +YL+ +I++LS
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 135 DQRDDLKSLSGENMAVGTGETLNSSRRDSVVVRSKNG-------LGIQVVLDTATQHRLP 194
            +RDDL  LS  ++    G +    + D  ++  KN        +G++++L +      P
Sbjct: 62  VRRDDLMVLSRGSL---LGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP 121

Query: 195 -VSDVIRVLAVEGLEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQHKLINLE 226
             S V++VL+  GL +L+ I++ V++R ++TI+ ++ D       ID+++L+ +LI ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVND---MALMIDLAELEKRLIRMK 174

[Close]

BLAST of Csor.00g308960 vs. TAIR 10
Match: AT1G12540.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 55/186 (29.57%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 70  NDQKRKKILHRDVERQRRQEMSSLYSSLRSLLPLEYLK--------------------TR 129
           ++ K K+  H+++ERQRRQE +SL+  LR LLP +Y+K                     +
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 130 IQQLSDQRDDLK------SLSGE----NMAVGTGETLNSSRRDSVVVRSKNGLGIQVVLD 189
           I+++S++RD +K      S  GE    ++A  T   +  +   +VVVR    +G+++V+ 
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDT-NIAVVVRPCL-IGLEIVVS 189

Query: 190 TATQHRLPVSDVIRVLAVEG-LEILSCITTKVNERYLHTIECQIVDNDGCYPSIDVSKLQ 225
              +H   +S V+++LA E    I+SCI+T++++ ++HTI  ++ +    Y     S+LQ
Sbjct: 190 CCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVY----FSELQ 249

The following BLAST results are available for this feature:

BLAST of Csor.00g308960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STJ6	1.2e-17	33.02	Transcription factor bHLH126 OS=Arabidopsis thaliana OX=3702 GN=BHLH126 PE=2 SV=...	[more]
Q9FLI0	2.7e-17	36.18	Transcription factor bHLH120 OS=Arabidopsis thaliana OX=3702 GN=BHLH120 PE=2 SV=...	[more]
Q9STJ7	8.0e-14	35.33	Transcription factor bHLH118 OS=Arabidopsis thaliana OX=3702 GN=BHLH118 PE=2 SV=...	[more]
Q9FLI1	2.3e-13	32.40	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]
Q9LN95	4.1e-10	29.57	Transcription factor bHLH55 OS=Arabidopsis thaliana OX=3702 GN=BHLH55 PE=2 SV=1	[more]

BLAST of Csor.00g308960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579463.1	2.55e-155	100.00	Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma...	[more]
XP_022922335.1	8.93e-133	83.20	transcription factor bHLH118-like [Cucurbita moschata]	[more]
KAG6579462.1	1.20e-128	81.67	Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma...	[more]
XP_022969885.1	2.28e-111	72.00	transcription factor bHLH120-like [Cucurbita maxima]	[more]
KAG6579464.1	7.58e-110	71.20	Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma...	[more]

BLAST of Csor.00g308960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E8G7	4.32e-133	83.20	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111430345 ...	[more]
A0A6J1I182	1.10e-111	72.00	transcription factor bHLH120-like OS=Cucurbita maxima OX=3661 GN=LOC111468949 PE...	[more]
A0A6J1K9B6	7.38e-83	58.66	transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111491282 PE...	[more]
A0A5A7TN30	2.79e-82	57.65	Transcription factor bHLH120-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1H558	2.43e-81	57.87	transcription factor bHLH118-like OS=Cucurbita moschata OX=3662 GN=LOC111459679 ...	[more]

BLAST of Csor.00g308960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25410.1	8.5e-19	33.02	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.9e-18	36.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	5.7e-15	35.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	1.7e-14	32.40	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	2.9e-11	29.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..89
None	No IPR available	PANTHER	PTHR13935:SF110	HELIX-LOOP-HELIX DNA-BINDING SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 107..224 coord: 34..108
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 76..115 e-value: 8.7E-6 score: 25.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 74..123 score: 9.91495
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 107..224
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 34..108
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 72..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g308960.m01	Csor.00g308960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0090575	RNA polymerase II transcription regulator complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity