Csor.00g308520 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g308520
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description14 kDa proline-rich protein DC2.15-like
LocationCsor_Chr15: 9046605 .. 9048061 (+)
RNA-Seq ExpressionCsor.00g308520
SyntenyCsor.00g308520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCAAACCTTATTCATTCTCTGCTTTTGCTTTCTTCCTCTCCTTCAATCTTCTCTTCTCCACGCTCATCACAACACCTTCTGCTACAGATTCACCCTCCAACCCACCAACCATTCTTCCACCTCTAACTCCGGCAGCGTCTCCTACCGCCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCGGCGTCTCCTAGCACCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCACCGTCTCCTGGCGCCGGTGAAAAATGTGGTGAAGATGGTATTAAGATAAGCATGTGCGCAATGTTGCTGGACTGGGATTTGCTCAAAGTGATTGTTGGGGGCGGAGCACCTGTAACACCTTGTTGCAGCCTCATGGAAGGCCTTGCTGACTATGAAGCCGCTGCCTGCCTTTGCGCCGCCATCAAGGCCAGCGTCTTGGGCGATGGGTTTGTGGATATACCAATTTCATTCACTTTGCTCCTTATTAATTGTGGTGGAAAAAAAGCACATGGTTTCAAGTGTTCTTGAATTCATTCACATTTTCATTTCCTTTTAATGTTGTTTTCATGTTGTTGGGGTCTATTTTTCTTACCTTAATCTTGTCGAGTCTATGTTTGTCCGTAACGACCTCCACCCCCTTTCGTAATAAGTAACATGATGGAATCTATCATTTTAAAATATCGTAGCATGACCTTAAACAACTTTCCAGACCAAGCTAGGTTATAGGTGCAGTACTTCTTTACACATGGCTTACGTGTACAAGCATAGGCTTCTAGACAGGCTCGCACACCATTTGGGTTTGACTTGTCGGTCAAGCACTTGCTAATGTGTTCTTGCCGAACACCACGGAGAGAAATGACCCGCATAATATCATGACGAACATAAATGTAAAAAATTATAAGTCGTAAGATACGTGTTAGTATTAATCATATTGGAGAGGTATCCTGATGCGCATGACACACAAATGTGTATGAGGTCCTCGTAACTTATAACCATGGCATAATGTATGATCCAAGATAAACCTCCATTTCTCGATAACATAACAAGTCTTGGAATTATGCTTATATGATTCTTATACATTATGTAGTACTTAGCCTAACTTTTATGATATAGTCTACACAGGTCTATGCATGAGACATTATCGTTTCATAACAATTTTGTACCAGATAAAAATTACAAAATAACCTAATTTTATTACATGACATGGATGAGATATTTAGTTTCTTTAACCTACATGTTCTAAGAGACAATGTTGTCGTATAAATCCAAGCTATCTCATTTGTCCATTTAACCACAAAAATACATCTTTAAGAAGATATCTTCTCATTTTCAAATTAGTATACGCTTAAATTATGAAACTCCCAACATTTGTGACAATTTTACGAGTATTTCCTAGTCGTTGGAATTCGAATTCAGTACTTGATGGTACTGTCATTCTCCTACATCTCCTGTGA

mRNA sequence

ATGGGTTCCAAACCTTATTCATTCTCTGCTTTTGCTTTCTTCCTCTCCTTCAATCTTCTCTTCTCCACGCTCATCACAACACCTTCTGCTACAGATTCACCCTCCAACCCACCAACCATTCTTCCACCTCTAACTCCGGCAGCGTCTCCTACCGCCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCGGCGTCTCCTAGCACCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCACCGTCTCCTGGCGCCGTACTTGATGGTACTGTCATTCTCCTACATCTCCTGTGA

Coding sequence (CDS)

ATGGGTTCCAAACCTTATTCATTCTCTGCTTTTGCTTTCTTCCTCTCCTTCAATCTTCTCTTCTCCACGCTCATCACAACACCTTCTGCTACAGATTCACCCTCCAACCCACCAACCATTCTTCCACCTCTAACTCCGGCAGCGTCTCCTACCGCCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCGGCGTCTCCTAGCACCGATGGAGAACCCGTTCTTCCTCCTCTAACTCCGCCACCGTCTCCTGGCGCCGTACTTGATGGTACTGTCATTCTCCTACATCTCCTGTGA

Protein sequence

MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPPLTPPASPSTDGEPVLPPLTPPPSPGAVLDGTVILLHLL
Homology
[Close]
BLAST of Csor.00g308520 vs. NCBI nr
Match: KAG6579419.1 (hypothetical protein SDJN03_23867, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180 bits (457), Expect = 7.51e-57
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60

Query: 61 LTPPASPSTDGEPVLPPLTPPPSPGAVLDGTVILLHLL 98
          LTPPASPSTDGEPVLPPLTPPPSPGAVLDGTVILLHLL
Sbjct: 61 LTPPASPSTDGEPVLPPLTPPPSPGAVLDGTVILLHLL 98

[Close]
BLAST of Csor.00g308520 vs. NCBI nr
Match: XP_022922374.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata])

HSP 1 Score: 122 bits (305), Expect = 6.73e-33
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60

Query: 61 LTPPASP 67
          LTPP SP
Sbjct: 61 LTPPPSP 67

[Close]
BLAST of Csor.00g308520 vs. NCBI nr
Match: XP_023522992.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo] >XP_023551619.1 14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119 bits (297), Expect = 1.10e-31
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNL+FSTLITTPSATDSPSNPP ILPPLTPAASPTADGEPVLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLIFSTLITTPSATDSPSNPPPILPPLTPAASPTADGEPVLPP 60

Query: 61 LTPPASP 67
          LTPP SP
Sbjct: 61 LTPPPSP 67

[Close]
BLAST of Csor.00g308520 vs. NCBI nr
Match: XP_022969938.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 102 bits (254), Expect = 3.03e-25
Identity = 59/70 (84.29%), Postives = 59/70 (84.29%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPP ILPPLTPA      GE VLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPPILPPLTPA------GESVLPP 60

Query: 61 LTPPASPSTD 70
          LTPP SP  D
Sbjct: 61 LTPPVSPGAD 64

[Close]
BLAST of Csor.00g308520 vs. ExPASy TrEMBL
Match: A0A6J1E372 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111430386 PE=3 SV=1)

HSP 1 Score: 122 bits (305), Expect = 3.26e-33
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60

Query: 61 LTPPASP 67
          LTPP SP
Sbjct: 61 LTPPPSP 67

[Close]
BLAST of Csor.00g308520 vs. ExPASy TrEMBL
Match: A0A6J1I2E1 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468986 PE=3 SV=1)

HSP 1 Score: 102 bits (254), Expect = 1.47e-25
Identity = 59/70 (84.29%), Postives = 59/70 (84.29%), Query Frame = 0 

Query: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPTILPPLTPAASPTADGEPVLPP 60
          MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPP ILPPLTPA      GE VLPP
Sbjct: 1  MGSKPYSFSAFAFFLSFNLLFSTLITTPSATDSPSNPPPILPPLTPA------GESVLPP 60

Query: 61 LTPPASPSTD 70
          LTPP SP  D
Sbjct: 61 LTPPVSPGAD 64

The following BLAST results are available for this feature:
BLAST of Csor.00g308520 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g308520 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579419.17.51e-57100.00hypothetical protein SDJN03_23867, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022922374.16.73e-3398.5114 kDa proline-rich protein DC2.15-like [Cucurbita moschata][more]
XP_023522992.11.10e-3195.5214 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo] >XP_0235516... [more]
XP_022969938.13.03e-2584.2914 kDa proline-rich protein DC2.15-like [Cucurbita maxima][more]
BLAST of Csor.00g308520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E3723.26e-3398.5114 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1I2E11.47e-2584.2914 kDa proline-rich protein DC2.15-like OS=Cucurbita maxima OX=3661 GN=LOC111468... [more]
BLAST of Csor.00g308520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g308520.m01Csor.00g308520.m01mRNA