Csor.00g308440 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g308440
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	polyadenylate-binding protein RBP47B'
Location	Csor_Chr15: 9002619 .. 9007141 (+)
RNA-Seq Expression	Csor.00g308440
Synteny	Csor.00g308440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTTCGTTTGTTTTTTTTGTTTATTTCTTCCTTCAAAATTTTAGGCACTTTTGTGTTTAATGATGTTGCTTTTAATCATAGACCCATTAGGACTTCAGTAGTTTCTCAATCTAGATGTGTGTATGGATTTTTGAGCTTTTGTTCGTTAATTTATAGCGTATGCGATTATTATCTAGGTCTGAAAGTAGGAAAAATGATTCAATCTGGTTGCCTCTTCGTAGCCATTGGATGTGGATTCAAAATTCCGCATGTACCTAGTAACAACTAGATATATGTCTGAGATACTTTTGCGGTTCAAATTGTGTAAAGCTGCCCACGACATTTTGGCGGCCATCTCGAGTAAGCTCTCCTGAAATTGAGTTGTTTTATTCTGGTCTTTGGAAGTGAATTTGCGTGATCAAATTAGAATGTGTTTGTATTTTGGTCCATTGCTACGAGAGCTGAGCTGTAGGGAAAGCCTCTCTTATGACCTTTCATGCCACTGAATGGGGATGAGTTTGATGTTTAATGTTAAAGAGCCGTGGTAGCGAAACGTCATTGTGTAAAATTATAGTTATTTTCTAGTAGTTGTTATGTTTCAACGGCCAGTACAAATATACTTTTGATGCCTGGTAGTTGTTTGTGTTATTGTATTCGAGTAAGAGCTTATAACTTTTAGCTGTTTGAGAAAAGAGAGTATTCTGTTATTTGTGAACTATTCTATTTTTTTTTTTTTAATACAGGTAATATCAATTAAAATTATTCGCAATAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACGCCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGGTAAAGGTAATGAGTATGTGTTGTACTGTCTTTCCTTTTCTTCATTTTATCACTTCTCTCGTTTTCTAATCTTTTTGTTCCATATGTAGCGGGTACTATCTTTTTTACTTTTCATCCAACTTTCCGGCCTTCCTAGGTTTTCTATTTGTATGAAACTGGTCTGGTTCCTGTCTGTGCGAGGAGTCATAGATATGAAGCTATTTGGCTTAAAAAGTTGAATTTCACCTTTTTCACTGAAAGTTCTCTTTTGGATACTGCTAAGCAATTTTTGCATCAATGAACCTAGAGCTAGGAGTTCAATAGGCACAAATGGACCATTCTGAAATTTTAGCAGATATTAGCTGAATTAGTGTTCTTGGATCTATGATGAAAACTTGTCAAGTTGATTGTTCCGTATGTATAATGTCTATGTCAAAGTACAATTTATCTCTATGATCTTCTCGGATTAAAACGTTAATCAATGTCGAAAATAATTTCTGAATGCCTTGATGGGAGATGTCATCTGTCAGTCACGAATGAAATTTATTCATTGTTATTATTATTTTTTCCTTCACCTAAAGAGAGAATCTTAGGAGGGGGATAGTACTGCTATTTTTAAACTTGTACTTACCAATGTGCCTCTTGGCTCAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTGTAAGTGAAGTGACTGTTATTTTCTCTGGTTTCTGTGCTTATCTCTTACTACATTGATCTTTATGCAGATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGTATGTTAGCATGACTAATTTTATTGATCCAAGTTGATTAAATTTAATCTTTTCTTGCTCCTGTTCCTATGCCCTGAAAGAAGGCCATGAATAAAAATAATAGTCAGTGGAAGAAAAAAATTATTGTGGAATAGGGAGAAAGCTTTTGTGTACGTACAATTTTCAAAGATATGTTATCTTCTTCTTATTTCACCATGAACATTTGGACTTGGATTAAGTACGTGTGTCCATGCAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGTAATTGACCTTCTATTGCAGTACAGAACAAATATTTACTTGATTTACTAAAATTCTTTTTACTCCGTGGATGTGATGTATAATGCGGTTTATAATTTAATGCTTGGGTTCACAAGAAATTTGTGTATAAAACATTAGGCATATTGTCTTTTATTTATTAATTTTTATTTTTGATACGAAACGAGAATGAATTAAAGAAAAATGATACAGCCTAGGGGGCTCCGTCGTGAGAATCCCCTCCGAAAAGAAGCTATGAGTAGGCTTTTCAATTGTTAACAATGGTAGAAATGTTGTATTTACAGAAGAATTTTCTGTGACTAAAGCCTCACCTAGAAACAAGGAGCTGTACATTTCTAAAAAAATAAAAAGAAGACTACTTATCTTCAAAAGTTATTTGGTTCCTTTCAAACCATATGTGCTAAAAACAATGCCTGGATTGCAAATCTTCATAAAATACTAGCATGTTTGGACAGCACAGTCTTTTATTTAGCCTGTGAGTTTGAAATTCATCTATATGAAGAAGGCTTGCATTTCATCATATTTAATAATATATATATATATATATATATATATATTTTTGGTTGTGAACGTTAAAACAGAATGGTATGAAAATAGGATCTAAAGAAAATGTATGGAAACGAGGTATCCTAAGAAAAGAATAACAGAAAATCATCTATAACCTGTATCAGACACAATCATTATCTTAATTATAATATATTGTTTTCAAATATTTTATCTCGGCAGGACTTTGGTACAAAAGGAAAGGACTTTGAATTTTCTTCTTTTGTGCACTCCTTGATAAAATTGGTTATGCGCGTTATCTTTCTGTTAGCAGCTCTGTGTACTGCTCATAGTGAACTAGAGTTCACTTTATTAAGTAAACTTTGATGAAATGGTGATGAATTTTTAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTAAGTTTCATATTCTTTAGACGACAAGGAGCTGTATATACTTCCGTGGTAGGTAATGGGCAGTGTGATTGTTATAATCTATTTGTTTGCAGCCATTTTCAATTGGAGTCTATTGGGTGAATTCTAATTGAACTTTCTGGATGCTAAGGCTTAGAATCAGAATAAAATGAGTGGGAATCAAGAGCAATATATATGTATAGATAAAGGTTGATATATTCAGAAAATTCATTGCCTGTTCTGATCTTGGAACTATTTACATAAACTATTTTCTTTCAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCTGTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAATGGTTAGGATCTCTCTCTCTTTTGTCCCTATGGAGATATAATATGGAGATACAATACGAGTTTGGAAATTTACAATTCTCTATCAGTATTTGAACTTGCATTGACATCAAGTTGTAAATTTTGCAGTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTTAGGCAAACATGAGCTTGGTGGTCCTCTGCATCTCCATTGTCGTCGGTAGTCATAGGTCATCAGCGCACAAAGGCAGCAGGAGGATTGTGGTATGTACTTTATATGCTCGACTATACTTCGGAAGGATGATATCGACATCATACAGTTGCTGTGTACTATACAACAGTAACACTGTTATTTAATTTCGTACTTCATTTTCCTCGTTCGGGATAGGTGCTTTGATGCTGTCCTCCGCCATTCGGAAATGGCGTTTTCGTATCAGGAGAGCATCTGCTTTGTTCCGTACCTTGTTTCTGTATTCATATTAA

mRNA sequence

ATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTAATATCAATTAAAATTATTCGCAATAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACGCCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCTGTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAATGTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTCATCAGCGCACAAAGGCAGCAGGAGGATTGTGGTGCTTTGATGCTGTCCTCCGCCATTCGGAAATGGCGTTTTCGTATCAGGAGAGCATCTGCTTTGTTCCGTACCTTGTTTCTGTATTCATATTAA

Coding sequence (CDS)

ATGGCGACTCTGGCAAGTCAACCAACGCACCATCAACCAACTTCGGTGGAGGAAGTTAGAACACTTTGGATTGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAGTTCTTGCTTCGCTCACACTGGCGAGGTAATATCAATTAAAATTATTCGCAATAAGATCACAGGGCAGCCTGAGGGTTATGGGTTTGTGGAGTTTGTGTCTCATGCAGCAGCAGAAAGAATTCTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCTTCTTTTGGAATTGGAGAAAGGCGTCCTGACGCAGGCCCTGAGCACTCTATTTTCGTGGGGGATTTGGCTCCTGATGTTACAGACTATCTGTTGCAAGAGACCTTTAGAGCTCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACAGGACGTTCAAAGGGATATGGTTTTGTAAAATTTGCTGATGAAAATGAAAGGAATCGAGCTATGTCTGAAATGAATGGTGTTTATTGCTCAACCCGACCTATGCGTATTAGTGCAGCAACGCCCAAAAAGACCATTGGTGTTCAGCAGCAATATACTCCAGCAATGTACCCAGTTCCAGCTTACACTACACCCGTGCCTGTGCTTCCAGCAGATTACGATGCAAATAACACAACTATATTTGTTGGTAACTTGGATCCTAATATTACAGAGGAGGAGTTGAAGCAAACTTTTTTGCAGTTTGGTGAGATTACTTATGTGAAAATTCCTGCCGGCAGAGGCTGTGGCTTTGTACAGTTTGGGACAAGGGCTTCAGCTGAAGAAGCCATCCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTTCGTACTTCCTGGGGTAGAAATCCAGCTGCCAAGCAGGACTTGGCTACTTGGGGTCAGCAAGTTGATCCGAACCAGTGGAGCGCCTACTATGGGTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGATGGTGTACAAGATTTGGCCGCTGTAGCTGGTGCTGTCCCTGCTGTGGAACAGGGAGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAATGTTTAAACGACGCATACCTCTCGAAACACGAAAGTGCTATTTTAGGCTGGCCTTTATGGTTGACTACCTCATCACTGGTCATCAGCGCACAAAGGCAGCAGGAGGATTGTGGTGCTTTGATGCTGTCCTCCGCCATTCGGAAATGGCGTTTTCGTATCAGGAGAGCATCTGCTTTGTTCCGTACCTTGTTTCTGTATTCATATTAA

Protein sequence

MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLVISAQRQQEDCGALMLSSAIRKWRFRIRRASALFRTLFLYSY

Homology

[Close]

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.3e-161
Identity = 290/417 (69.54%), Postives = 332/417 (79.62%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQY-TPAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNIT 246
           ISAATPKK +GVQQQY T A+YPV    A   PV   V P + D   TTI V NLD N+T
Sbjct: 191 ISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVT 250

Query: 247 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 306
           EEELK+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +N
Sbjct: 251 EEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKN 310

Query: 307 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 366
           P   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G
Sbjct: 311 PG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEG 370

Query: 367 VQDLA-AVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 417
            QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL
Sbjct: 371 TQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSL 419

[Close]

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-116
Identity = 221/359 (61.56%), Postives = 261/359 (72.70%), Query Frame = 0


Query: 1   MATLASQPTHHQPT-SVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQ 60
           MAT    P+   PT +  EVR+LWIGDLQYW+DE+YLS+CF HTGE++S K+IRNK TGQ
Sbjct: 67  MATTNPNPS---PTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 126

Query: 61  PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 120
            EGYGF+EF SHAAAE ILQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGD
Sbjct: 127 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGD 186

Query: 121 LAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVY 180
           LA DVTDY+LQETF++ Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV 
Sbjct: 187 LAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVL 246

Query: 181 CSTRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNI 240
           CSTRPMRI  A  KK +G  Q+   A Y  P  T        + D NNTTIFVG LDP +
Sbjct: 247 CSTRPMRIGPAANKKPVGTPQK---ATYQNPQAT------QGESDPNNTTIFVGGLDPTV 306

Query: 241 TEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 300
            EE L+Q F  +GE+ +VKI AG+ CGFVQFGTRASAE+A+  + G  +G Q +R SWGR
Sbjct: 307 AEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 366

Query: 301 NPAAKQ-DLATWGQQVDPNQWSAYYGYGGAYDAYGYG-VVQDPSLYAYGAYSGYASYPQ 357
           +P++KQ D   WG         AYYGYG  Y+AYGY    QDP++Y YG Y GYA+Y Q
Sbjct: 367 SPSSKQTDQTQWG-----GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQQ 406

[Close]

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.5e-109
Identity = 205/355 (57.75%), Postives = 254/355 (71.55%), Query Frame = 0


Query: 4   LASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGY 63
           +   PT  Q +S E+ +T+WIGDLQ W+DESYL SCF+  GEVIS+KIIRNK TGQ E Y
Sbjct: 69  MQQSPTQIQSSS-EDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERY 128

Query: 64  GFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 123
           GFVEF +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA D
Sbjct: 129 GFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASD 188

Query: 124 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 183
           VTD +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+R
Sbjct: 189 VTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSR 248

Query: 184 PMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVL---PADYDANNTTIFVGNLDPNIT 243
            MRI  ATPKK    +Q  + A+     Y +         +D D++NTTIFVG LD  +T
Sbjct: 249 AMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVT 308

Query: 244 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 303
           +EEL+Q+F QFGE+  VKIPAG+GCGFVQF  R+SA+EAIQK+ G IIG+Q VR SWGR+
Sbjct: 309 DEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRS 368

Query: 304 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVV--QDPSLYAYGAYSGYAS 354
           PA KQ     G     +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 369 PANKQMRTDSG-----SQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

[Close]

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.3e-108
Identity = 206/353 (58.36%), Postives = 249/353 (70.54%), Query Frame = 0


Query: 13  PTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P + +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFG 252
           KKT GVQ++   A               ++ D NNTTIFVG LDPN+TE+ LKQ F  +G
Sbjct: 263 KKTTGVQERVPNAQ-----------GAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYG 322

Query: 253 EITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWGQ 312
           E+ +VKIP G+ CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ       
Sbjct: 323 EVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ------P 382

Query: 313 QVDPNQWSA-------YYGYGGAYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 358
           Q D NQW A       Y GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 QHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.3e-105
Identity = 194/347 (55.91%), Postives = 249/347 (71.76%), Query Frame = 0


Query: 5   ASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A+ P   QPT+ +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEE 244
           PMRI  A  KK +  Q+          +Y +    +  D D NNTT+FVG LD ++T++ 
Sbjct: 227 PMRIGPAASKKGVTGQRD---------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDH 286

Query: 245 LKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAA 304
           LK  F Q+GEI +VKIPAG+ CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P+ 
Sbjct: 287 LKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSN 346

Query: 305 KQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 351
           K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 K-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of Csor.00g308440 vs. NCBI nr
Match: KAG6579411.1 (Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 931 bits (2407), Expect = 0.0
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLVISA 420
           VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLVISA
Sbjct: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLVISA 420

Query: 421 QRQQEDCGALMLSSAIRKWRFRIRRASALFRTLFLYSY 458
           QRQQEDCGALMLSSAIRKWRFRIRRASALFRTLFLYSY
Sbjct: 421 QRQQEDCGALMLSSAIRKWRFRIRRASALFRTLFLYSY 458

[Close]

BLAST of Csor.00g308440 vs. NCBI nr
Match: XP_022969899.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 854 bits (2206), Expect = 4.11e-312
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417

[Close]

BLAST of Csor.00g308440 vs. NCBI nr
Match: XP_022922189.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 853 bits (2203), Expect = 1.18e-311
Identity = 416/417 (99.76%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           VQDLAAVAGAVPA+EQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417

[Close]

BLAST of Csor.00g308440 vs. NCBI nr
Match: XP_023550834.1 (polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852 bits (2201), Expect = 2.38e-311
Identity = 416/417 (99.76%), Postives = 416/417 (99.76%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGE TYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGETTYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417

[Close]

BLAST of Csor.00g308440 vs. NCBI nr
Match: XP_022969897.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022969898.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 849 bits (2193), Expect = 4.25e-310
Identity = 417/419 (99.52%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 419

[Close]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL
Match: A0A6J1I3Z8 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 854 bits (2206), Expect = 1.99e-312
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417

[Close]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL
Match: A0A6J1E2P3 (polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 853 bits (2203), Expect = 5.70e-312
Identity = 416/417 (99.76%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240
           STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNIT 240

Query: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300
           EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN
Sbjct: 241 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 300

Query: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360
           PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG
Sbjct: 301 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 360

Query: 361 VQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           VQDLAAVAGAVPA+EQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 VQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417

[Close]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 849 bits (2193), Expect = 2.06e-310
Identity = 417/419 (99.52%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 419

[Close]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 848 bits (2190), Expect = 5.89e-310
Identity = 416/419 (99.28%), Postives = 417/419 (99.52%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYTP--AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYTP  AMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           DGVQDLAAVAGAVPA+EQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 419

[Close]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 825 bits (2130), Expect = 8.21e-301
Identity = 404/419 (96.42%), Postives = 410/419 (97.85%), Query Frame = 0


Query: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60
           MATLA QPTHHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEVISIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYT--PAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+   AMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQDLATWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSLV 417
           DGVQDLA VAGAVP+VEQGEEWNDTLDTPDV+ LNDAYLSKHESAILGWPLWLTTSSLV
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDYLNDAYLSKHESAILGWPLWLTTSSLV 419

[Close]

BLAST of Csor.00g308440 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 570.1 bits (1468), Expect = 1.6e-162
Identity = 290/417 (69.54%), Postives = 332/417 (79.62%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQY-TPAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNIT 246
           ISAATPKK +GVQQQY T A+YPV    A   PV   V P + D   TTI V NLD N+T
Sbjct: 191 ISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVT 250

Query: 247 EEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRN 306
           EEELK+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +N
Sbjct: 251 EEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKN 310

Query: 307 PAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDG 366
           P   QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G
Sbjct: 311 PG--QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEG 370

Query: 367 VQDLA-AVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 417
            QD++ + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL
Sbjct: 371 TQDISNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSL 419

[Close]

BLAST of Csor.00g308440 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 567.0 bits (1460), Expect = 1.4e-161
Identity = 285/413 (69.01%), Postives = 327/413 (79.18%), Query Frame = 0


Query: 7   QPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFV 66
           Q ++H P ++EEVRTLWIGDLQYWVDE+YL+SCF+ TGE++S+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYTPAMYPVPAYTTPVP--VLPADYDANNTTIFVGNLDPNITEEEL 246
           ISAATPKK +GVQQQY   +    A   PV   V P + D   TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250

Query: 247 KQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAK 306
           K+ F Q GE+ YVKIPA +G G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +NP   
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPG-- 310

Query: 307 QDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDL 366
           QD   W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD+
Sbjct: 311 QD--GWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEGTQDI 370

Query: 367 A-AVAGAVPAVEQGEEWNDTLDTPDVECLNDAYLSKHESAILGWPLWLTTSSL 417
           + + AG V   EQ  E  D L TPDV+ LN AYLS H SAILG P+W  TSSL
Sbjct: 371 SNSAAGGVAGAEQ--ELYDPLATPDVDKLNAAYLSVHASAILGRPMWQRTSSL 415

[Close]

BLAST of Csor.00g308440 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 384.0 bits (985), Expect = 1.6e-106
Identity = 194/347 (55.91%), Postives = 249/347 (71.76%), Query Frame = 0


Query: 5   ASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYG 64
           A+ P   QPT+ +E+RTLWIGDLQYW+DE++L  CFAHTGE++S K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEE 244
           PMRI  A  KK +  Q+          +Y +    +  D D NNTT+FVG LD ++T++ 
Sbjct: 227 PMRIGPAASKKGVTGQRD---------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDH 286

Query: 245 LKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAA 304
           LK  F Q+GEI +VKIPAG+ CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P+ 
Sbjct: 287 LKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSN 346

Query: 305 KQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 351
           K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 K-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]

BLAST of Csor.00g308440 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 382.9 bits (982), Expect = 3.7e-106
Identity = 197/350 (56.29%), Postives = 239/350 (68.29%), Query Frame = 0


Query: 13  PTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 72
           P S  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQF 252
            K  + +Q    PAM     Y         D D NNTTIFVG LD N+T++ELK  F QF
Sbjct: 233 NKNALPMQ----PAM-----YQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQF 292

Query: 253 GEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLATWG 312
           GE+ +VKIP G+ CGFVQ+  +ASAE A+  + G  +G Q +R SWGR+P  + D A W 
Sbjct: 293 GELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQW- 352

Query: 313 QQVDPNQWSAYYGY-GGAYDAYGYGV---VQDPSLYAYGAYSGYASYPQQ 358
                     YYGY       YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 ------NGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]

BLAST of Csor.00g308440 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 374.8 bits (961), Expect = 1.0e-103
Identity = 203/359 (56.55%), Postives = 249/359 (69.36%), Query Frame = 0


Query: 6   SQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCF--AHTGEVISIKIIRNKITGQPEGY 65
           S+   HQ     E +T+W+GDLQ W+DE+YL+S F  A   E++S+K+IRNK  G  EGY
Sbjct: 89  SRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGY 148

Query: 66  GFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAP 125
           GFVEF SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAP
Sbjct: 149 GFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAP 208

Query: 126 DVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCST 185
           DV+D LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+
Sbjct: 209 DVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSS 268

Query: 186 RPMRISAATPKKTIGVQQQYTPAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEE 245
           R MRI  ATP+KT G QQQ      P  A+T       ++ D  NTTIFVG LD ++T+E
Sbjct: 269 RAMRIGPATPRKTNGYQQQ--GGYMPSGAFTR------SEGDTINTTIFVGGLDSSVTDE 328

Query: 246 ELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPA 305
           +LKQ F +FGEI  VKIP G+GCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRNPA
Sbjct: 329 DLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPA 388

Query: 306 AKQDLATWGQQ-VDPNQWSAYYGYGGAYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQV 359
            KQ    +G Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQV
Sbjct: 389 NKQPRDKYGNQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQV 433

The following BLAST results are available for this feature:

BLAST of Csor.00g308440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXZ9	2.3e-161	69.54	Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'...	[more]
Q9LEB4	3.8e-116	61.56	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9LEB3	3.5e-109	57.75	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	1.3e-108	58.36	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	2.3e-105	55.91	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]

BLAST of Csor.00g308440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579411.1	0.0	100.00	Polyadenylate-binding protein RBP47B', partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022969899.1	4.11e-312	100.00	polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita maxima]	[more]
XP_022922189.1	1.18e-311	99.76	polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita moschata]	[more]
XP_023550834.1	2.38e-311	99.76	polyadenylate-binding protein RBP47B'-like isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_022969897.1	4.25e-310	99.52	polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022...	[more]

BLAST of Csor.00g308440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3Z8	1.99e-312	100.00	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E2P3	5.70e-312	99.76	polyadenylate-binding protein RBP47B'-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HXL5	2.06e-310	99.52	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E2I3	5.89e-310	99.28	polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A1S3ATQ6	8.21e-301	96.42	polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Csor.00g308440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19350.1	1.6e-162	69.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	1.4e-161	69.01	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G11650.2	1.6e-106	55.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	3.7e-106	56.29	RNA-binding protein 45A	[more]
AT1G47500.1	1.0e-103	56.55	RNA-binding protein 47C'	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..96 e-value: 1.6E-14 score: 64.2 coord: 114..188 e-value: 3.6E-21 score: 86.3 coord: 229..296 e-value: 3.9E-23 score: 92.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 230..293 e-value: 1.0E-18 score: 66.9 coord: 22..90 e-value: 2.4E-14 score: 52.9 coord: 115..180 e-value: 2.3E-16 score: 59.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 113..192 score: 17.455235
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..100 score: 15.374476
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 228..300 score: 17.523457
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..203 e-value: 2.1E-22 score: 81.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 220..307 e-value: 4.9E-25 score: 89.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 19..99 e-value: 3.7E-24 score: 86.6
None	No IPR available	PANTHER	PTHR47640:SF6	POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED	coord: 9..357
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 9..357
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 21..101 e-value: 2.25424E-48 score: 158.58
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 227..298 e-value: 2.08942E-38 score: 132.042
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 112..191 e-value: 5.74154E-54 score: 173.234
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 112..302
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 7..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g308440.m01	Csor.00g308440.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding