Csor.00g308420 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATAATAACGATAGGAGCAATGGAAGATGCGGAGGTAATTGGAGGATTGATGGCGGTGCAGTTCATATACGCCGGAAACTCGGTGTTGCTGCGTTATTTGATGTCGTTAGGGCTCAATCCGTTTACCGTCGTCATTGTTATTGCCTCTGCAACTTTTCTCTTTCTCTGTCCTCTTCTCCGACTCTATATCTTTTTCTCGCAGATGAATTTGATGAACGATGTGCATACCGAGGAGCATTTGGCTCAAGAAATTGAGTTTCATGTTGCTGCTTCAGCTTGTTCTGATCTCCTTTCGCAGGTACGCAGAATTATCTAGTTTTTGTTTCCTTTCTCATTTTCGAGTCTTTAGGCTTATTTTATAATTTCATTTAATTACATAATTATTTTTTTGAATATTTGTTCTTATACCATTTTTTAAGATGAAACAATTCGAACAGAATTGATCAACTCAGGTAAAAAGATCTTGTCATTAGGATAACTTTGTAGACTGTTTCAGAATCTTTTGTGCACTAAAATTCATATAGAGGAATAGTGATTGGCATAAGCTTGAGGTTGAACGGATCGGCACGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGGCCATTGGAATGGAACCGTTTTCTCCGTCATTCTCTCTGTCTCCACCTTAGGGAACACTATTATTTCCATTTGAAGGTACGTTAG ATGGAAATAATAACGATAGGAGCAATGGAAGATGCGGAGGTAATTGGAGGATTGATGGCGGTGCAGTTCATATACGCCGGAAACTCGGTGTTGCTGCGTTATTTGATGTCGTTAGGGCTCAATCCGTTTACCGTCGTCATTGTTATTGCCTCTGCAACTTTTCTCTTTCTCTGTCCTCTTCTCCGACTCTATATCTTTTTCTCGCAGATGAATTTGATGAACGATGTGCATACCGAGGAGCATTTGGCTCAAGAAATTGAGTTTCATGTTGCTGCTTCAGCTTGTTCTGATCTCCTTTCGCAGAGGAATAGTGATTGGCATAAGCTTGAGGTTGAACGGATCGGCACGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGGCCATTGGAATGGAACCGTTTTCTCCGTCATTCTCTCTGTCTCCACCTTAGGGAACACTATTATTTCCATTTGAAGGTACGTTAG ATGGAAATAATAACGATAGGAGCAATGGAAGATGCGGAGGTAATTGGAGGATTGATGGCGGTGCAGTTCATATACGCCGGAAACTCGGTGTTGCTGCGTTATTTGATGTCGTTAGGGCTCAATCCGTTTACCGTCGTCATTGTTATTGCCTCTGCAACTTTTCTCTTTCTCTGTCCTCTTCTCCGACTCTATATCTTTTTCTCGCAGATGAATTTGATGAACGATGTGCATACCGAGGAGCATTTGGCTCAAGAAATTGAGTTTCATGTTGCTGCTTCAGCTTGTTCTGATCTCCTTTCGCAGAGGAATAGTGATTGGCATAAGCTTGAGGTTGAACGGATCGGCACGAAGAAAAGAGGGCCAGTTTTGGTGTCAATTTTCAGGCCATTGGAATGGAACCGTTTTCTCCGTCATTCTCTCTGTCTCCACCTTAGGGAACACTATTATTTCCATTTGAAGGTACGTTAG MEIITIGAMEDAEVIGGLMAVQFIYAGNSVLLRYLMSLGLNPFTVVIVIASATFLFLCPLLRLYIFFSQMNLMNDVHTEEHLAQEIEFHVAASACSDLLSQRNSDWHKLEVERIGTKKRGPVLVSIFRPLEWNRFLRHSLCLHLREHYYFHLKVR Homology
BLAST of Csor.00g308420 vs. ExPASy Swiss-Prot
Match: Q9FGL0 (WAT1-related protein At5g47470 OS=Arabidopsis thaliana OX=3702 GN=At5g47470 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy Swiss-Prot
Match: F4JMI7 (WAT1-related protein At4g16620 OS=Arabidopsis thaliana OX=3702 GN=At4g16620 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. NCBI nr
Match: KAG6579409.1 (WAT1-related protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 306 bits (784), Expect = 6.83e-105 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. NCBI nr
Match: XP_022922194.1 (uncharacterized protein LOC111430256 isoform X2 [Cucurbita moschata]) HSP 1 Score: 302 bits (773), Expect = 5.10e-103 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. NCBI nr
Match: XP_022922195.1 (uncharacterized protein LOC111430256 isoform X3 [Cucurbita moschata]) HSP 1 Score: 301 bits (770), Expect = 9.01e-103 Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. NCBI nr
Match: XP_022922193.1 (uncharacterized protein LOC111430256 isoform X1 [Cucurbita moschata]) HSP 1 Score: 300 bits (768), Expect = 3.05e-102 Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. NCBI nr
Match: XP_023550501.1 (uncharacterized protein LOC111808626 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284 bits (726), Expect = 5.67e-96 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy TrEMBL
Match: A0A6J1E2P9 (uncharacterized protein LOC111430256 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430256 PE=4 SV=1) HSP 1 Score: 302 bits (773), Expect = 2.47e-103 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy TrEMBL
Match: A0A6J1E816 (uncharacterized protein LOC111430256 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430256 PE=4 SV=1) HSP 1 Score: 301 bits (770), Expect = 4.36e-103 Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy TrEMBL
Match: A0A6J1E5W5 (uncharacterized protein LOC111430256 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430256 PE=4 SV=1) HSP 1 Score: 300 bits (768), Expect = 1.48e-102 Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy TrEMBL
Match: A0A6J1I312 (uncharacterized protein LOC111469135 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469135 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 7.96e-93 Identity = 138/146 (94.52%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Csor.00g308420 vs. ExPASy TrEMBL
Match: A0A6J1HZU3 (uncharacterized protein LOC111469135 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469135 PE=4 SV=1) HSP 1 Score: 275 bits (702), Expect = 1.70e-92 Identity = 137/147 (93.20%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of Csor.00g308420 vs. TAIR 10
Match: AT5G47470.1 (Nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of Csor.00g308420 vs. TAIR 10
Match: AT4G16620.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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