Csor.00g307820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g307820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 1630789 .. 1632890 (-)
RNA-Seq ExpressionCsor.00g307820
SyntenyCsor.00g307820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATGATCCTACGGTTGGGATTCACCCTATCTGCGAAGCCGGAATCTACGGTCAGGATTTATTTCCAGTAACGACACTCCGTACTCCGGCACGTACCCTCGACAATCATCTCTGTCCAATTAAAAATTGACACGTGGACGAACCGTTTTTATGATTACTCGGTTTCAATGTGAGCGGAATACTGGATTCCCCCCCTCCGTTTTTTTATTTTTTTTTCTTCTTTGCGTCCGGAAAGATCTCGATCCATTTTGTGTTTCTTTCGCAATAAAAACAAACTGCGAGTGGAGATTTTGATTTAAACGATAAGATTTGAAGCTCTTGGTTACTGCTCCTGGATCGGATTGGATCGATCTGATTTCTTCTTTCTTTGTGCTAATCTGTTTGTTTTGATTCATCTGTTCGTATCGATTTTCTTCGTTCTTGCTCATGATTTTTCGTTCTTGTTGTGGATTCTCTTTGAGGAACGTTGCGATGCTCACCGAGGTCACGGCACTGTTTGATTTGTCTTTCAGAAGCTTTTAATTACGTGTTGTCGGCACTGTTACCGACGTCCTGCATGGAGGAGAGAGAATCGAGTTTTTTTTTTTTTTTTTTTTTTGTTTCTTTAACCGCTTATTTATTTCGTACTGAACCTAAAAGCCCTAATTAATTTCCAGTACCTTCAGAAAATGTTTGTTCCTTCATGAAATGGTGTGTTGATGGTTTGGATTTTGAGCGGCTTTATGGTTTTTGATGCTCCGGATCTGGCCTCGCTTCGTCGTCTTCATCATTCTATGATCTATCTCTCTCTCGTCTCTCTGCGGATTTCTGTGTTTACGTTTGTCTCCATTACACATGTGAAAGATTATTTACTGAAAATTATTTGTTTATCGTTCTTGATGGTGTTTTACTCTATAGGTAATCGTCCCTGGGACTTGGAATTTGACAGAAGAGAGTGAGCACCCAGAGGCACTTGGTATAAAGTGTATACTAATGCTTTTGCGTGCTCACTTCTCTCTCTGTCAGATTCGATAGATGGATCGGGCTCCGTAATTTTTTGCCATCGGTTTGCCGTTTTAGTTTCACATTCTTTTTTGGACTTGGAATTGTATGTGTCTTTCATCCAGTGAATCGGATTTGCAGTTTTTTAGAGCGTGCCTTTTCATGTTGCTCACTGACCGGAGTTCTCGGCGCGACCATGAAATTACCGTACAACGGGACCTCTCTCAATGTAGATATAGGTTGGTCCTCTCCCTATTGGTCTCTCTCTCCTCTCTCTCTCTCTATTCTTTTCCCTCTCGAGCAATAGTTTATGTTTCTCTTGTTATATTTTTTTGGCATTTGTATTATGGCCTCTTTATCATTTGATGCACTAGTTTCTTAATATGCGCATGCTTTGATTTGAATTCATGTCATCGGTTTCTGTTTTCTCCAAAAAATTTCCTAACAACGATGGGAAGTTCACACTAGATAGCTTCTGTAGGTCATTTGAAAAAACCCTATGTTACCTAGAAATTGAACGACGTTGTTATTAGTCTACCAATGGATTGTTCATAAGGCGGAGAAGGAGAACTTCTAATCTAATTTCCGGTCGTGTATTTTTTGTTTTCCTGTGATTCAAATCTGATTCTCGGTTTTCCTTTCACTGCTGTTATGGCTATTACGATCTCTCAATATATTAATTGATTGGAGAACTTGCTTTATCTATAATGTCATAATTTGCAAGATTACCAAACAATTTGCACTTAACTTCCTTGCTCTTTAGTATTTGTAGGAAATCCTATTCGTTTATGCAACTTGTGTGGTGTATTTTACTCTTTTTCAATTGAATTTTAGACCTCTGCTCGCCGTACTGCTAGAGATTGCTTCGATAGAATTAATTGCCCCATCACACTATACTTTTTCGATTTTACTTCCTCGAATATCTGATATCACCGTGTACCACTCCCCTTCCCATGTATTAGTAATTGTAAGAATTTACTTGCTAGGTTGCATGTTTTTCTACTTGCATCTTGTAGGGTTAAGATTAAAATTTTAAGAAGCAAAATGTCAATTGATTGTTCTTGAATCTTTTTCTAATGAAGTTGCGTATCCTCGTACAGGTGTGAGGATAATATAA

mRNA sequence

ATGATAATGATCCTACGGTTGGGATTCACCCTATCTGCGAAGCCGGAATCTACGGTAATCGTCCCTGGGACTTGGAATTTGACAGAAGAGAGTGAGCACCCAGAGGCACTTGTGAATCGGATTTGCAGTTTTTTAGAGCGTGCCTTTTCATGTTGCTCACTGACCGGAGTTCTCGGCGCGACCATGAAATTACCGTACAACGGGACCTCTCTCAATGTAGATATAGGTGTGAGGATAATATAA

Coding sequence (CDS)

ATGATAATGATCCTACGGTTGGGATTCACCCTATCTGCGAAGCCGGAATCTACGGTAATCGTCCCTGGGACTTGGAATTTGACAGAAGAGAGTGAGCACCCAGAGGCACTTGTGAATCGGATTTGCAGTTTTTTAGAGCGTGCCTTTTCATGTTGCTCACTGACCGGAGTTCTCGGCGCGACCATGAAATTACCGTACAACGGGACCTCTCTCAATGTAGATATAGGTGTGAGGATAATATAA

Protein sequence

MIMILRLGFTLSAKPESTVIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGATMKLPYNGTSLNVDIGVRII
Homology
[Close]
BLAST of Csor.00g307820 vs. NCBI nr
Match: KAG6598547.1 (hypothetical protein SDJN03_08325, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161 bits (408), Expect = 6.16e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MIMILRLGFTLSAKPESTVIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGA 60
          MIMILRLGFTLSAKPESTVIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGA
Sbjct: 1  MIMILRLGFTLSAKPESTVIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGA 60

Query: 61 TMKLPYNGTSLNVDIGVRII 80
          TMKLPYNGTSLNVDIGVRII
Sbjct: 61 TMKLPYNGTSLNVDIGVRII 80

[Close]
BLAST of Csor.00g307820 vs. NCBI nr
Match: KAG7029480.1 (hypothetical protein SDJN02_07819, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120 bits (302), Expect = 1.09e-33
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 19 VIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGATMKLPYNGTSLNVDI 75
          VIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGATMK+PYNGTSLNVDI
Sbjct: 1  VIVPGTWNLTEESEHPEALVNRICSFLERAFSCCSLTGVLGATMKIPYNGTSLNVDI 57

The following BLAST results are available for this feature:
BLAST of Csor.00g307820 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g307820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598547.16.16e-50100.00hypothetical protein SDJN03_08325, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029480.11.09e-3398.25hypothetical protein SDJN02_07819, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g307820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g307820 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g307820.m01Csor.00g307820.m01mRNA