Csor.00g307010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g307010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	clp protease adapter protein ClpF, chloroplastic
Location	Csor_Chr05: 2139172 .. 2146493 (+)
RNA-Seq Expression	Csor.00g307010
Synteny	Csor.00g307010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGTCGGTTGAGGGGAGTAGGTTGCCTCTATGATTTATAGGGTTTTAAAATCTGTCCCTTTTTTTTTAAAATTTAATAGCACATGATATTTAACCGAATTTAAATTTATAGTTTTTTTCATCGTATATATTTTAATGCCATTATCACGTTAAATTATTATTTAAAATTTTAAAAAATATATTTCTAGTCGTGTGTATTTTAATTTGGATAAACTTCTAACATTTTTATTTTACGTTTAATTGATGATATAATATTTTTTTTATTATTAAATTAATTAGACATAAAGGATTATAAATTTTAAAATTTATATGAAATATTTATTAAAATGACGATTTATTAAACTCAAAATTGGAGTAAATTAAAAAATTAAGGATTTATTACATAATTAAATACAAAATTGCAATAACCAGTTAAATTTTTTTTTTTTAATTAAACTTATCAGCCTATGTTTTAAAAAAAATTAAAATTAACATTTGGAAAAAAAACTTATTTTTGCTTTTAAAATTGCCTATGAAATTAAATATTTACTAGATAAAAATCGAAACAATAAATATAATTTAAAAAAATGTCATCAATAATATTACAACTCTTAAATTAATATTAATATTTTTTAATATTTCAAGGTAGTTTTGTAATTTTTGTAATTTCTAAAATTTAATAACCTTTGGTTTCACTAAATTAATTTTTAACTAATTAGTAAAACGTTAATATGACGACATAATTTGTTTTGCATATGTCATTTTATAATTAATTATTTTATAATTATGATTATTAATAAATTGATTAATAATCATATAAAGGAAACGAGGTTACTTTAGATTTTAAATAAAGTTTAAGAAAAATTGGATTAATATTTTTCATGAAGGGCGTTAATATAATAAATATTTAAAAATTAAAATCTCATGGTAATTAATCAAAATAGAAAGTCAAATAAAATAATTGATGATGACGTCATTCAATTATAAATTTGAAATAGATAAGGAAGCATTAATGACAAATTAATTTGAGTCGAATAATATTGATATTACAAGTTGAAAATATGAAACCTAAGTAGCCTTTACTTTTATTAATGTAACATTTTTTTATTGTTGTTTTTTAAAACACTTTAACCACTCCTTCATTAATTATATTATAAATTTAGTTGTATGACTTTTTCTTTTAATAGGTCTCTAATATATTTATTTTTTAAATAATTGATTTATTAAATGTAAAATTAAAATTTACTGGTTAATAATTAATTATTAAAATATGATTTAATAGACGTGTTGTTCTATTTAATTGTGGTATTTTTAAATATTATTTATAATTTATTTATTTACTTTTGATATCATGATAAATGACATAAATTTCTAATCACTGAGTTAAATGTACGTTGACTTTAACCAATTCTCACTCTGATTATATAGACAAGAAAATAGTTGGTCTTATTAATCACGTAATTAAAATTTTAGTTTGATTAATCACCCGTACTTTTTTTCATAAAATTTCACTTTTTTTAAAAAAAATATTCATAAACTTTTAAAAGTTTGAATTATACCTTTCCATTAATATATATATATAATAATAATAATAATAATAAATTAAAAATATCATAACGGTTAATTTTGGAGGTAAACCGTCACTACTTTATTTAAAAAATACTGTTGAAAATACCTTTTAATTTTTAAAAATATTATTAATACCCTTTAATTAAAAAAATTAAAAAAAAATTCTTATCCTTAGTAATTATATTTAAAAAATACTCATTAAATTTTAAAAATAGTATTAACGTCTTTTACCTTTATTGAAACAAATTATTACTATTAATATATATAGATAAAAACTGTCTAAGAGTATTTTTTAAATTCTTTTTAATTTTTTTTAATTGAGGAGTATTATCGAAAATTTTAAAAGTTTGGTATTTTTGAGACTGAATGATTTTTGAATTATTTTAGCCGTGTAATTATATAAATAAATATTTAATTATTTATTGGATTGATTTATGATTGTGGAGATTTGAAAAATGAATATGATGACAAAAATGCCCCCATTTTTCTTTCTACATAGTACATAATCACGTCCTTTTCTTCGTCAATTCGGTCGGTCTCCATTGACTTGGGGTCACTGGTTTGGTCCAAAATTGTAAAATCATCTATTATTATTTCCGTCAAATTAATTCAGTCAAATTAATGGCGTAAATCAACAACCATTGCATAAACGTTAAACGTAGAAAGAAAAAAAAAAAAAAAAAAAGATTCAAAGTCAAAGTAAACTTTAGTTTAAGATACATATTTTCGATTAAAAAAAAAAGTTAATATTTGAATTATTCACGGTAACTATGTGAGGTTAGTATGATTTAAAAATCCGACCTGTCGATTAACTCGTGTACGTTTAAACTAGTTAAGTTATGTTCAAAGTATAATTTGGTTACATCTTACAAATCATTGCTATATAAACGAACAATAATTACTTTTACTGATGTTAACTTCATCTGTCGTCAAAAGAGAGAGTTTCGATCTCTTTCTGTTGTCTCGAGAGAAATTATCTTAGAAACCTAAACTAGACAGAATAAAACGTACTTTGAAGGCTAGCTACGAAATGACAGTTCGTATTGACTGAAAACAAGTACTTCAAAATAAGTAGTAGACTATGAATGTCGGTCCTTAATGTTAGAGGGAAAATACAGGGTTTGAAAAGAAACAACTATGTACTCGGGAGTGAGGAATATTTAAAACACGTCCCTGAAGTAGAAGTGAGGTAAGGAAGGAAACGAAGTCAAAAGATCACGTGCAAACGTATAATAGATCATATCTGTACATAGTAAGATAGTCTACTGATTTACTTGTTTGTTATCATGAATCAAGGAGAATCTATGATTTCTTTGTTATAATCCTCATTATACACATTTATAAATACATGAGTTCGTGGCCCATATAAGTTACGGTGCCATTCAACCTAACATGGTATCAGAGTCATGCTCTCAACTTAGCTATGTCAATAGAATCCTCAAATGTCGAACAAATGACTTCAAAAGAAAAAGGAGTCGAGACTTGATAGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAGCCTCGATTAAAGAGAGACGTACTTTGTTCGAGAGGAGGTGTTGGATAAAAGTCCCACATCGGCTAATTTAGGGAATGATCATAGGTTTATAATCAAGAAATACCATCTCTATTGGAATGAGACATTTTGGAAAACGGAAACAAAAGCTGTGTTTAATATAATCCTCACAATAAAATAATATATCACAATTTTTTTTTAATAAAATGGTTTTAAATAGAGTGAAGTTTGAATTTAAATTAGACCATTGGATCAAGGTTAATTAAGTAAATCAAGGGCGGAGAAAAATTGATAAAAGAAAAAAATAATATAATAATAAAGTTCAGTAACTAAAAATATTTTGTAACCAAATTGATATTTGTTGTACAATTAAATTCATAATAAAGAAAGCACGTATAATACGACGTCGTTAGATGTCGGATAACGTCGGAACGAGGCCATTCCACTGGCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGGTGCGTTTTCCGGCCTTCTTTCTAACCCTAGCTTTAGATTCTCTTTTTTTCTTTCTCCGCCATCGTATAAAATCACAGTGGATGGAATTAATCTGCGGTATTTAGTATATCTCTGTTTGGTTGCGGAGTAATTGTAAAATGCAGTATAGAAATTCAAGAAATTCTTCAGCATTTGAGCTTGGATTTTCCGTTTTTTTCGGATTTTATCAAATAATTTTTTCTCTGACACGGTGTTAGATCGTTTGTATTTCTCAGCTCCGCTGCGTCTCATGGATTAAATCGTATATGGACCTTGTTTCTTTTATCTTCCCTCTGTCGTTAACCAAACTAGGGAGTTCCGGTTCTTTCTGTTCGATTCGATGCTGATTAATTTTTTGCGATTTCCAGTGAATTTATGATAAATGTGTAGTTCTCGGTTTGTGACTGAGCCGATTTCTCCAAGTAATAGCGGCTAGTATAGCATTGAGAAAGAAAGAGATTCTTAGTGAAGTTTTCGCTTAATGTTTTTTATACAATGGAAAATTTCTCAGTAAAGCTTCTAAGTTTGATTATTAGCTTAAGTGAGTTGAATGATTCTCCTTTGAATAACTAGTTTTCTTGTTCATAATCATTCTTTGCTTATGCGTGTCTTTTGGCATTAAATGATTTCCAATCAGTTTTCCTGGTGAGTGTTTCATTTTCTCATTGGTCCTCTAGTAATAATCAGCCTCTGAGCTGAAGCTGATCCTACTTTGCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGGTATAGCAGGCTGTTGTTTGTTATTGATTTGCTTGTATAAGTGACATAATAGCTATCTCATGAACAAGATTTTCCTGGTATGGATTGTTGTGCTGCAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTATTCTTGATTCGAAATAAAACGACTTATTCATAACTCATAGGGACATATATTTTGAATTGTCTGTTTTACTTGCCAAAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGGTAAAGTCTCCCTTATATTATACCCATATTCGTATTTAGGTTATATCAATCAAATTGTATCTTTTGATCTTATAGTACTTTGGAATATTTAAACTTCTTGATCTCAGGTATTTATTGCCTTTTTCTATGTCTTTTTACAGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGTATTATAGTTGCAGGCTTTTCACACCAGTGTTTCAGCTTAATTTAATTTCTTTGAGGAAAAATATGCCAAGTTGAATATTATTGATACCTATATTAGCAAAAGGCATGGATTTGGAGTGATCTATCAAATTACGACATTGGAGTTGCGACAATCATGGTGTTTTAGATTGAAATGCAGCTTTACAGAAAAAATGAGTAATGTAGAGAAGTTAGAACAAGTAAGAACATCCTTGGTATCTTGTAGGATTTTCCTGTTGGCGTATGAAATCAAATGAAGGTGAAACAAATTTGTAAAGAAATGGATGAGAGGGTTTATTGCTGTATAGTAATATTCAAAAAGATCATTCTTGGATCTTCCAATGTGCCATACTGTTCAGCTATAGTTTTAATACAGTTTGTTAGTGTCTCTTTCTCGTACTAAAAACATAGTGTCTCTTTCTCGTACTAAAAACATTTTTCATATCAGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTCAGGTTTTATTGACCTTGCTATGCATCTTTCTCTTCTTCTTCTTTGATTTTTATTTCGTTTTGTTGGTATAAGAAGCAAGATCAAATGAAAAAAAGAAAATTGATTAAAAGTGGATAAGTAATCCTTCAAAAGAAACTAAAAAGAGTCCTAGTGTAACAGCCCAAGTCCACTACGGGCAAATATTGTCTTCTTTGGACTTCTCTTTCGGACTTCTCCTCAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACTCTTGTAAGGAATGCTTCGTTTCCCTCTCCAATCGATGTGAGACCTCACAATCCACCCCTTTGGGGGCGCAGCGCTGGCACTTTGCCCGGTGTCTGGCTCTGATACCCTTTGTTACAGGCCAAGTCCATCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCTTCAAAGTTTTAAAACATGTCTACTAGGGAGAGGTTTCCACACCCCTATAAGGAATGTTTCGTTCCCCTCTCCAACTGATGTGGGACCTCACAATCCACCTCCTTGGGGGCCCAATATCCTCGCTGGCACATTGCCCCGGAGTCTATCTCTGATATAATTTGTAACAGCCCAGGTCCATCGCTAACAAATATTGTCCTCTTTGGACTTTCCATTTTGGGCTTCCCCTCAAGGTTTTAAACATGTCTACTAAGGAGAAGTTTCTACACCCTTATAAGGAATGCAGCGTTTCCCTCTCCAACCGATATGAGATCTCACACCTAAATATTTTCATTGGTGTTAAAGATGTGAAATGACAATATTTACAAATGAAACCCATAAAAATGTCAACAGGGCCTGATTGTCTCTCTTCCTCCTCCAATAATTCATTTTCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGGTAAACTTTCTATGAATCTTGATGATTATAGAATACAGAATTACTTAGATTTTGAATGTAGTTTCATTCTCCTGCATGGCTTAATCTCTTTACAATGTGCGTTGTGATATGTCGAAGACCATTGATGTGGATTGTTCTTCTATATTCTATAATGCAGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGTGGCTGTCCGCTTCCTTCAATTCTATCATCACTGTTATTAGTTAGAACGTTGCTAGGAGTTATGAGCTGACTGTGATGATGATGTGCAGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGA

mRNA sequence

ATGTTTGGTCGGTTGAGGGGAGTAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGA

Coding sequence (CDS)

ATGTTTGGTCGGTTGAGGGGAGTAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGA

Protein sequence

MFGRLRGVEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

Homology

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BLAST of Csor.00g307010 vs. ExPASy Swiss-Prot
Match: Q67Y99 (Clp protease adapter protein ClpF, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPF PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.0e-114
Identity = 225/334 (67.37%), Postives = 259/334 (77.54%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQP 110
           MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +   
Sbjct: 1   MVQSQSLSTLTICGSVKV-SSLLRNRLNSVKASSLIGDRCVSCQFL--RKSPSFR-SHWK 60

Query: 111 CRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 170
              +R   +V+A W F+GGG QGLD   ERSE+AN DILIFFFQLDLATRVQYA+N+EQY
Sbjct: 61  SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 120

Query: 171 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 230
           +IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA
Sbjct: 121 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 180

Query: 231 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 290
           +LRD+ISKLE ESLA SAK LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSW
Sbjct: 181 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 240

Query: 291 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 350
           ME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Sbjct: 241 MEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHPYISFLY 300

Query: 351 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 382
           YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Sbjct: 301 YGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 330

[Close]

BLAST of Csor.00g307010 vs. ExPASy Swiss-Prot
Match: O94952 (F-box only protein 21 OS=Homo sapiens OX=9606 GN=FBXO21 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 257 FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPD 316
           + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE-----D 562

Query: 317 LLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKY 367
               Y A+ENL    EP  +   HP +   ++   +   +IP  +L  +Y
Sbjct: 563 GSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYIPNAELEIRY 604

[Close]

BLAST of Csor.00g307010 vs. ExPASy Swiss-Prot
Match: Q5R5S1 (F-box only protein 21 OS=Pongo abelii OX=9601 GN=FBXO21 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 257 FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPD 316
           + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE-----D 555

Query: 317 LLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKY 367
               Y A+ENL    EP  +   HP +   ++   +   +IP  +L  +Y
Sbjct: 556 GSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYIPNAELEIRY 597

[Close]

BLAST of Csor.00g307010 vs. ExPASy Swiss-Prot
Match: Q8VDH1 (F-box only protein 21 OS=Mus musculus OX=10090 GN=Fbxo21 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.0e-08
Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 239 ESLAASAKVLAYES-AEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLS 298
           E +    K+ + E   +  + +G   +HK +GY  VI G DP C     W+    V  L 
Sbjct: 484 EEVGVEVKLRSEEKHRDVCYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLP 543

Query: 299 RGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFI 358
            G +QPFY VLV+     D    Y A+ENL    EP  +   HP +   ++   +   +I
Sbjct: 544 HGHHQPFYNVLVE-----DGSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYI 603

Query: 359 PVKQLREKY 367
           P  +L  +Y
Sbjct: 604 PNAELEIRY 604

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BLAST of Csor.00g307010 vs. NCBI nr
Match: KAG6598627.1 (Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765 bits (1975), Expect = 1.09e-278
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   MFGRLRGVEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHAL 60
           MFGRLRGVEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHAL
Sbjct: 1   MFGRLRGVEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHAL 60

Query: 61  TALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKA 120
           TALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKA
Sbjct: 61  TALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKA 120

Query: 121 GWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEV 180
           GWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEV
Sbjct: 121 GWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEV 180

Query: 181 EEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETES 240
           EEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETES
Sbjct: 181 EEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETES 240

Query: 241 LAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGP 300
           LAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGP
Sbjct: 241 LAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGP 300

Query: 301 NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVK 360
           NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVK
Sbjct: 301 NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVK 360

Query: 361 QLREKYNRPRHEVPYDPQDDDEQRGDD 387
           QLREKYNRPRHEVPYDPQDDDEQRGDD
Sbjct: 361 QLREKYNRPRHEVPYDPQDDDEQRGDD 387

[Close]

BLAST of Csor.00g307010 vs. NCBI nr
Match: KAG7029563.1 (Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 749 bits (1934), Expect = 2.17e-272
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 9   EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKV 68
           EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKV
Sbjct: 12  EKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKV 71

Query: 69  YGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG 128
           YGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG
Sbjct: 72  YGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGG 131

Query: 129 QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQ 188
           QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQ
Sbjct: 132 QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQ 191

Query: 189 ESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVL 248
           ESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVL
Sbjct: 192 ESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVL 251

Query: 249 AYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL 308
           AYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL
Sbjct: 252 AYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVL 311

Query: 309 VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNR 368
           VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNR
Sbjct: 312 VDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNR 371

Query: 369 PRHEVPYDPQDDDEQRGDD 387
           PRHEVPYDPQDDDEQRGDD
Sbjct: 372 PRHEVPYDPQDDDEQRGDD 390

[Close]

BLAST of Csor.00g307010 vs. NCBI nr
Match: XP_022962595.1 (clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata] >XP_022962596.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata])

HSP 1 Score: 667 bits (1722), Expect = 6.03e-241
Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
            KRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  LKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 350
           AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 351 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Sbjct: 301 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 337

[Close]

BLAST of Csor.00g307010 vs. NCBI nr
Match: XP_023547352.1 (clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023547353.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655 bits (1689), Expect = 6.44e-236
Identity = 329/337 (97.63%), Postives = 334/337 (99.11%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIHALTALGDPKVYGSTLSWRKNF QTSPPTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHALTALGDPKVYGSTLSWRKNFMQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
           SK+GNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKQGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEYSFRLGQKT+HKIFGYRGVICGMDPVCCESSSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYSFRLGQKTKHKIFGYRGVICGMDPVCCESSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 350
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGLNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 351 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           D+AGDFIPVKQLREKYNRPRHE+PYDPQDDDEQ+ DD
Sbjct: 301 DTAGDFIPVKQLREKYNRPRHEIPYDPQDDDEQQRDD 337

[Close]

BLAST of Csor.00g307010 vs. NCBI nr
Match: XP_022997209.1 (clp protease adapter protein ClpF, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 642 bits (1656), Expect = 6.61e-231
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTSP THLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHSLTSLGDPKVYGSPLSWRENFKQTSP-THLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
           SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEAEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYNFRLGQKTKHKIFGYRGVICGMDPVCCETSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 350
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGSNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 351 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           D+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Sbjct: 301 DTAGDFIPVRQLREKYNRPRHEVPYDSQDDDEQRGDD 336

[Close]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL
Match: A0A6J1HFJ3 (clp protease adapter protein ClpF, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462998 PE=4 SV=1)

HSP 1 Score: 667 bits (1722), Expect = 2.92e-241
Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
            KRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  LKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 350
           AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 351 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Sbjct: 301 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 337

[Close]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL
Match: A0A6J1KAU5 (clp protease adapter protein ClpF, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492180 PE=4 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 3.20e-231
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTSP THLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHSLTSLGDPKVYGSPLSWRENFKQTSP-THLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
           SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEAEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYNFRLGQKTKHKIFGYRGVICGMDPVCCETSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 350
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGSNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 351 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           D+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Sbjct: 301 DTAGDFIPVRQLREKYNRPRHEVPYDSQDDDEQRGDD 336

[Close]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL
Match: A0A6J1KD74 (clp protease adapter protein ClpF, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492180 PE=4 SV=1)

HSP 1 Score: 637 bits (1643), Expect = 3.30e-229
Identity = 324/339 (95.58%), Postives = 332/339 (97.94%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 110
           MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTSP THLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHSLTSLGDPKVYGSPLSWRENFKQTSP-THLTSRQFFWHQRMRSFSLASQPCR 60

Query: 111 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 170
           SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 171 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 230
           QELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEAEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 231 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 290
           DQISKLETESLAASAKVLAYESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYNFRLGQKTKHKIFGYRGVICGMDPVCCETSSWMEI 240

Query: 291 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT--ERFDHPYNSFLFY 350
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT  ERFDHPYNSFLFY
Sbjct: 241 AQVEKLSRGSNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFY 300

Query: 351 GVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           GVD+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Sbjct: 301 GVDTAGDFIPVRQLREKYNRPRHEVPYDSQDDDEQRGDD 338

[Close]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL
Match: A0A1S3BCC1 (uncharacterized protein LOC103488481 OS=Cucumis melo OX=3656 GN=LOC103488481 PE=4 SV=1)

HSP 1 Score: 585 bits (1507), Expect = 1.77e-208
Identity = 300/340 (88.24%), Postives = 316/340 (92.94%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQ 110
           MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQ
Sbjct: 2   MVQDLSIHAMTALGDPNVYGSALSWRRNCKYFKQTSL-TQLTSRQCFWHQCMRSFSLTSQ 61

Query: 111 PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 170
           PCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIFFFQLDLATRVQYALNIEQY
Sbjct: 62  PCRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 121

Query: 171 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 230
           EIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AA
Sbjct: 122 EIAQELRMKLTEVEAEIIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAIESENYALAA 181

Query: 231 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 290
           QLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSW
Sbjct: 182 QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYIGVVCGMDPVCCESSSW 241

Query: 291 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 350
           MEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Sbjct: 242 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 301

Query: 351 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQDD EQ+GDD
Sbjct: 302 YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQDD-EQQGDD 339

[Close]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL
Match: A0A5A7VGB7 (UvrB/uvrC motif-containing protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00550 PE=4 SV=1)

HSP 1 Score: 584 bits (1506), Expect = 2.52e-208
Identity = 299/340 (87.94%), Postives = 316/340 (92.94%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQ 110
           MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQ
Sbjct: 2   MVQDLSIHAMTALGDPNVYGSALSWRRNCKYFKQTSL-TQLTSRQCFWHQCMRSFSLTSQ 61

Query: 111 PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 170
           PCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIFFFQLDLATRVQYALNIEQY
Sbjct: 62  PCRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 121

Query: 171 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 230
           EIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AA
Sbjct: 122 EIAQELRMKLTEVEAEIIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAIESENYALAA 181

Query: 231 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 290
           QLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSW
Sbjct: 182 QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYIGVVCGMDPVCCESSSW 241

Query: 291 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 350
           MEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Sbjct: 242 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 301

Query: 351 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 387
           YGVDSAGDFIP+KQLREKYNRPRHE+P+DPQDD EQ+GDD
Sbjct: 302 YGVDSAGDFIPIKQLREKYNRPRHEIPFDPQDD-EQQGDD 339

[Close]

BLAST of Csor.00g307010 vs. TAIR 10
Match: AT2G03390.1 (uvrB/uvrC motif-containing protein )

HSP 1 Score: 414.8 bits (1065), Expect = 7.4e-116
Identity = 225/334 (67.37%), Postives = 259/334 (77.54%), Query Frame = 0


Query: 51  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQP 110
           MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +   
Sbjct: 1   MVQSQSLSTLTICGSVKV-SSLLRNRLNSVKASSLIGDRCVSCQFL--RKSPSFR-SHWK 60

Query: 111 CRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 170
              +R   +V+A W F+GGG QGLD   ERSE+AN DILIFFFQLDLATRVQYA+N+EQY
Sbjct: 61  SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 120

Query: 171 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 230
           +IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA
Sbjct: 121 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 180

Query: 231 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 290
           +LRD+ISKLE ESLA SAK LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSW
Sbjct: 181 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 240

Query: 291 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 350
           ME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Sbjct: 241 MEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHPYISFLY 300

Query: 351 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 382
           YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Sbjct: 301 YGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 330

[Close]

BLAST of Csor.00g307010 vs. TAIR 10
Match: AT2G03390.2 (uvrB/uvrC motif-containing protein )

HSP 1 Score: 346.3 bits (887), Expect = 3.2e-95
Identity = 170/220 (77.27%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 162 LNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESE 221
           +N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE
Sbjct: 1   MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60

Query: 222 NYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVC 281
           +Y  AA+LRD+ISKLE ESLA SAK LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C
Sbjct: 61  DYGLAAKLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPIC 120

Query: 282 CESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHP 341
            ESSSWME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHP
Sbjct: 121 SESSSWMEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHP 180

Query: 342 YNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 382
           Y SFL+YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Sbjct: 181 YISFLYYGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 220

The following BLAST results are available for this feature:

BLAST of Csor.00g307010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67Y99	1.0e-114	67.37	Clp protease adapter protein ClpF, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
O94952	2.9e-08	32.73	F-box only protein 21 OS=Homo sapiens OX=9606 GN=FBXO21 PE=2 SV=2	[more]
Q5R5S1	2.9e-08	32.73	F-box only protein 21 OS=Pongo abelii OX=9601 GN=FBXO21 PE=2 SV=1	[more]
Q8VDH1	5.0e-08	30.23	F-box only protein 21 OS=Mus musculus OX=10090 GN=Fbxo21 PE=1 SV=1	[more]

BLAST of Csor.00g307010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598627.1	1.09e-278	100.00	Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperm...	[more]
KAG7029563.1	2.17e-272	100.00	Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022962595.1	6.03e-241	99.70	clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata] >XP_022962...	[more]
XP_023547352.1	6.44e-236	97.63	clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo] >X...	[more]
XP_022997209.1	6.61e-231	96.14	clp protease adapter protein ClpF, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g307010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFJ3	2.92e-241	99.70	clp protease adapter protein ClpF, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KAU5	3.20e-231	96.14	clp protease adapter protein ClpF, chloroplastic isoform X2 OS=Cucurbita maxima ...	[more]
A0A6J1KD74	3.30e-229	95.58	clp protease adapter protein ClpF, chloroplastic isoform X1 OS=Cucurbita maxima ...	[more]
A0A1S3BCC1	1.77e-208	88.24	uncharacterized protein LOC103488481 OS=Cucumis melo OX=3656 GN=LOC103488481 PE=...	[more]
A0A5A7VGB7	2.52e-208	87.94	UvrB/uvrC motif-containing protein isoform 1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Csor.00g307010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03390.1	7.4e-116	67.37	uvrB/uvrC motif-containing protein	[more]
AT2G03390.2	3.2e-95	77.27	uvrB/uvrC motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	COILS	Coil	Coil	coord: 226..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..387
None	No IPR available	PANTHER	PTHR31350:SF21	SI:DKEY-261L7.2	coord: 135..383
None	No IPR available	PANTHER	PTHR31350	SI:DKEY-261L7.2	coord: 135..383
IPR011722	Hemimethylated DNA-binding domain	SMART	SM00992	YccV_like_2_a	coord: 254..358 e-value: 1.0E-14 score: 64.9
IPR011722	Hemimethylated DNA-binding domain	PFAM	PF08755	YccV-like	coord: 256..352 e-value: 1.0E-25 score: 90.1
IPR011722	Hemimethylated DNA-binding domain	TIGRFAM	TIGR02097	TIGR02097	coord: 255..356 e-value: 1.1E-31 score: 107.1
IPR001943	UVR domain	PFAM	PF02151	UVR	coord: 207..238 e-value: 1.7E-8 score: 33.9
IPR036623	Hemimethylated DNA-binding domain superfamily	GENE3D	2.30.30.390		coord: 253..354 e-value: 5.2E-25 score: 89.3
IPR036623	Hemimethylated DNA-binding domain superfamily	SUPERFAMILY	141255	YccV-like	coord: 256..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g307010.m01	Csor.00g307010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005515	protein binding