Csor.00g306900 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g306900
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like
Location	Csor_Chr05: 2194413 .. 2206294 (+)
RNA-Seq Expression	Csor.00g306900
Synteny	Csor.00g306900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCAAAATGGCGATTCTTTCTCGAACTCAAACCATAATCAGAAACTCGAACCTCAACAATGTCTGCTTCTTCAAGCCCATTACCACCTTCACATTTCTTTCTCAAGAACCTCAGCTCGCTAATGAACCAGCGGACATTCCATCAACTCCACTTCCTCCAAATCCCGCCTCCGGCAGCCCTCTTTACAACGAGAACTGGCGTAATCCAATACCCAACGCTTCTCGGACTCTGTCAATGATCCCCCTCGGGTTCCTTAACCAATCCCCGAGCTCTCGCATTGAGGCATTGTCTCAAACGCTCGATGTTCAGAGCTTGTTGAACGTTTTTGCTGATTGGATGGCTTCCCAGCGCTGGGAAGATATGAAGCAGTTGTTTGAATTTTGGATTCGGTCTCTGGATAAGAATGGCAAGCCTAATAAGCCGGATGTTAACTTGTATAACAATTATTTGAGGGCTAACTTGATGGTTAACGCCTCGGCTGGGGAGCTTCTGGATCTAGTGGCTCAAATGGAGGACTATGCGATATCACCCAACACTGCATCATTCAATTTAGTATTAAAGGCGATGTATCAGGCTAAGGAGACTCAGGCCGCTGAAAAATTGATTGAACGGTCAGATTTTGAACCTTATTCGTCATTCAATCTTCAATAAATGTGCGTTCTTTTATCTGTCAACTACTTTTGTTCCGTGCGTCTATAGATTAACCTCTTTAACGAACTCCTTTGTTATTGCTTGTTTATTGGGAATTAAAAGCTTATCGTTCTTTGGGTCTAGCATTGATCCATGATCATGAATTACGCATTGAAGTTACTCGTACAGTTTGAAATCTTTAGGATATTATTTCAACTGAAAAGTTTCTAGATTATGTCCCCCATGCAAAACTTGATGATAATAAAATGCTTCCGGGGGACAATAATGGTAGTTGTTTCAAGTGAATATCTGGAAAAGCATATCAATTTTCAGGGATCAATACTACTTCTAGCTATTGGTCTTGATTGTAGTAATCTCTCACACTCTTGAGGGAGTTTTCTTATTAATCAATGTGAATGAAAATTAAAACCAAGTGCAGTAACATAACGATTAAACTTAAACACAACTAATTACAATAGCTTATTAACTAATCAGAGAATAAAATAATGATGAGTTATTATCCCCCTCAAGAAAATTCCCGTAGATGCTTGAGTTGGATCGCCAAAACAGTCTCGAGCACTTGGATGTGGCTTAGTGAATAGATAAGCATTTCTTGAGTAGTGGAAATTTGATGAAGTTCAATATCTTTACGAAGCACACGCTTGTGTATAAAGTAAAAATTTATTTCCACGTGCTTCCATCAACCATGGAAAATCGGATTGTGAGCTAGTTGAAAAGCTGAGACATTATTTGCATTGGACTATATTGCAGTTAAGTGTGCTTTTCTCTATATTGCAATTTGTTGTGCTTTGAGCCTGATTTACTGTTAAGTGTGCTTTTCTCTACAAAAACAATGGCCTTTAAGCATCGTTGTCATAAGTTATAGGCTTTAAACATAATTTTCTTTCTTGTTATCAGTATGTTGCAGACAGGAGAAGAGTCAATGCCTGATGATGAATCATATGATTTAGTAATTGGAATGCTGTTGTCAACAGATCAGATTGATGCTGCATTGAAATATATTGACTTGACTTTAAAATCAGGTCATATGCTGTCGTTGAAAGTGTTCACTGAATGTGTGCGGAGCTGCGTTAAAAAAGGCAGGCTGGACACACTGGTGTCGGTAATTGATAGGTGCAAGGTAATAAACCAGTTCAATTGATGGCTAAGAAAAGAATTTTTTGCTTGTTGCTTCATTACTTCTCCTGTTGGTGTAACAGGCAACTGTTCAGAATAAAGCTCTTTGCCCAACATGGAACTTGTGTAATTTTATCGCTGAAGTAGCAACGCAAGAGGATAATAGTAAACTTGCTTATTATGCTCTAGAATTTATGGCCAGATGGATTGCTCGAGGTGAAAATGCGAGGCCTCCAGTTCATCTTTCAGTAGATGAAGGAATAGTTGTATCAGCTCTTGGAACTGCAGGTAGAACCTACAGCTCTTCTCTTTTAGATGCATCTTGGGCAATTCTAAAGCGCTCATTGGGACAAAAGAAGGTTCCAAATCCTGAATCTTACCTTGGAAAGATTTATGCTCTTGCATCATTTGGGAATCTGCAAAGGGCCTTTACTACCCTACGTGAATTTGAAGAGGCTTATAGGACTGCTGATGATGGAGCTGGTGAAGAAATGTTTTCTCCATTCACTTCTTTATATCCATTAGTTGTGGCATGCTCTAAGAAGGGTTTTGAGACCCTGGACACGGTATAACTTTCTACCCGTAAAAATTAAGAATCTGCAATTTCCATGAGTAATGTAGTATAAAGTATAATATGGTACCTTGCATTTACAATATTCAAATGATTGATGCCTTCTGCTAAGTTCCTACCTATAACCAGGACATGAAGTGTTTCAATAAAATTTAATCTTGTCAGTTCCTACAAATCTTGGAGATAGTTTTCTTTGTCAGTGCCATATATGGGCTCTCATCAAATAATAACGTTTATTGTGGGAGGTCTAGAAGAATATTCACTATTACTATGATAAAAATCAACTGAGGCAAGTAGAGTGCAATTGTCTCTCTCACAGAACACGAACACGAACACAAAAGGTTATTTGATGCGTGTCATATTAGATACATTGCATGCTTTCGTTGTTGAAACATGATTATCAGTGATTAAATTAAGAAGTTCATGGTAGGTGAGTATTTTTATTTGTTTCCTCTAATTCATCGGAGTTTCCAATCTAATTTTCTCTACTGTTTTAGGTTTATTTTCAACTGGAAAACTTGAGCCGTGCAGATCCTCCTTACAAGTCTGTTTCTGCATTGAATTGTGTGATTTTAGGCTGTGCAAATATATGGGACCTTGATCGTGCGTACCAAACGTTTGAAGCAATTGGTTCCAGTTTTGGTTTGACCCCTGATATCCATTCATACAATGCTCTGATATACGCATTTGGAAGGCTAAAGAAGGTGAGCCTTTAACCTTTTATACCACTCCCTTGTTCACACACAAAAACTCACGTGCAATTAGCTGCTGAAATTCCATGGACTGCTGATGGTTGGTGGCTGAAAAAACTAACATTTGACAAGTGTCATTTATGGGTTAGATTGCTGTGTTTTTGTCGCGAGATGGGTCTGAATGCGTAATGAAGCATTACGTGCTCTCTATGTGCACGCACTTCAGGGGTTCAATGCACAGTCAAATATTTCTTATGGACATCACACATATTTATAGTCTATATAAACTGAAAATTTTGCTCACTTACTATGGTCACTTGACAGACATTTGAAGCTGCAAGGGTGTTCGAACACTTGGTAGGTTTGGGCGTCAAACCAAATGCAAAATCTTATTCGCTGCTTGTTGATGCTCATATCATTAACCGCGATCCCAAATCAGCTCTCTCCGTGATCGATAACATGGTGAGTTTTTCGTTTCAATTGACTTGTATTCATCTGTATATCCGTGTTCTTATCACGGTGGTGCTAATTACGTCACAAAACATTTTTGGAAGGTAACTGCTGGATTTGTACCTTCAAAAGAAATGCTGAAGAAGGCAAGGAGGCGATGTATGCGAGAGATGGATTACCCTAGTAACGATAAGGTGGATTACCTGGCCAAAAATTTCAAAATTCGAATGGGAACAGAGAATCGTAGGGACATACTGTTCAATCTGGACTACGGCACCAATTATGTTGCATAATAGGTAAACTTCTAAGCAGCAGCAATACTCGCAATCAAAATATAATCCAAACATGTTCATCATCTTAACTTAAAGCTTAAGAATGGTGTAGTTCATGGAAATTTTGAAGTTGATTAACTTTTGTTGATATTTTGCAGGCTTTCATTCCTACTTGGAAAATCTGAGCTGCGCTAATTGGTATGTCAAACCTGCCAGCAGAGTTTTGCCTCTTCACAAAGATATGTCATTCTATATTTGTAAATTATTAGAGTCAACAAATTTCAATCTTGGCGGGATGAATGTTAGGATCATGCCCTTTTCACCATTTAGATTCATATATATTTGTTTGACGTCTTCCCAGAAAATTAGTGAACCAAAACTGAGTTCATTCATTTTGACCTTGATGAATAATATGTCCAACTGGAATTTTGCTGTATCTACCTCTTTCAGCAGTTCTTTTACCTTCTGTTGGAAATTCTTCGGGTACGGATACTCTTATTTATTGTCTGTCATGTCAGCATCGGAGTTTACCGGTGTAAAAAAAAAAATTATGAAGATAGATCTTTAGTGTGGACAAGAACAAGGAGAGTATTCAACTCTCATATTACTAGATTTTTTTTCTGAATCAATGGTGTTGTTGGATGATGAAAGTCTCACATCAGCTAATTTATTATGATCCTGAGTTTATAAATAAAGAATATTCTCTCCATTGGTATGAAACCTTTTGGAGAAGCCCAAAGCAAAGTCATGAGAGCTTATACTCAAAGTGGACAGTATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGGTGTCTCGCAGAGAATAAGATGGTTACAATTGTTTTTGTTTTTTCGGTAGTAAACGTGGTAAAGGTGAGGTTAGAGCTGGAAAATGACAAGTGCTATCAGTTCTAGGAGTAATTTTGGTGTAAATGGTGACTTTTGTTACTAATGGAATGCTTTACGCCACAAATGCAGGCAGGCCATATTGGTCTTAGGTAGGTGGGGTATTGTTAGCTATTGCAACTCATTCGGTCATGTACGTATTGTTCATAATATTGGAACATCTTGAACATCCATTCATCCGGGTTCTCTTGAGTCATTGGACCCACACGTGTCTATGTCACATCATTTATGGACTCTGTACCCAATAGCAGGTGTATGATCTAGCCTTCGACACATGAGCTAGGGTGCGATGTCGGCACACCCATGTTGTCCAACACTGTCCTTGAAAATCCCATCTCAAAAAAAGTTGTCTGAGACACTTGTCTCGTAATGCTCGCCACATTGTGATATATGTATGTGCCATAGGGTAGTTTGCTTTGGCTACAGGGCTCGGTGGTGGTGGAGAGTTGACATCATGTCTCTCTCATGATACATTTTGAGGCATTTTTAATTTGGGAGGTGTAGACATGATTTTGCGGAATGGATATACATTGTTGTGGAGCGTTCGTTCGGTATCCGATTGACACCAAATTTGGTGAGCTTTCATCTTTCATAAGGATGGACTTAACTTCAGAGCTATATGCCCAAACTTCTTTTAAACCTAGACTTTAGAGGTTAAGGTTTGGAATCCTACTCGACCTTTCATCAAGCCTATTTTTGTCTCTCATGTCAACATCGTTGCTTTCGTCTCACTTATGCCTCAATTTGGCTTCAAATGCACATTTCTTTGGTGTGCTAGATAATGCACCGTCTTCTTCGGTCCCATCATGACTCGCCTATCATGGCCTTCAAGTGGCTGAATAGGTGCTACTTGAGAGTCGCCACTTTGCTTGTCTCGACGTGAGGGTTACAACTTACTCTTTTCATAATATTTTAGAATAGGATAATTAATTCAAATCAAAATGGAAATTAATATTTCTAATATATTTTTTTATATAAAAAAATTAAATATAAATGAATATGAATTGAAATTATAACAATAAAATGTTGAATTATTAAAGAAACAGAAATATTATATAAATTCAATCAAAAATCGGAAGATAATGTTTTGAATAATATATTATTTTGAAACATTGAAATAAATAGATTGTCTAAATATTTTTGGATAATTTTTTTTTATAAATTTTATTGTAAAAAGAAAATAGGTTAAATTAACCCATTGGTCTGTACGGGGCAACTGATTCTGTTTGTTCATCTTAGTAGGAAACTCACCATCGACAGAAGGCGTAGCGCTAAATTCGAAGGCCATGGAAATTTTGATCTACAGTAGTTGAAACCTGCCGGTGAGCTCTAATTGTTTGGAGGATTCTGCCTCTCTTTTCGGTCTGAGGTTCGAAAAATTTATTTTCTGCAATTCCAATCAGCTGTAGCTATTTAGTTTCAGGGCAATTCATTTGAATTAGAGTCTAAGGCCTTCAAGCTTCGAATCACCTCTCATGGATCGGAAACATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATCCAAAGGCAATGTTCTGATTCCCTTCCCATCTCAGATTCCACTCACCACTATTGGAAATTTGCGATTGATATTTCCTCTTTCTTTTTTCAATCTATAGATCTGGTTCTCGTTTCAAAATCGTGGGGAGACGATTCTTTGACGCGTTTGTACCGGAGGCAAGCTTGTGTTTGGATTTCTTCGACTCTATGTAGTGTCCTTGATTTTTTTTTTTTTTTTTTTCCCTTTCTTATTATCAATCTTTCGTTCAATTGCAGGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGGTAAAAGTTTAATTTACTTGTTTCTCACCTGTTACATTTGGCAATCTTAATCACCATGAATATGAGTTGATGTAAATAATAAAATGCTTGGAAAGGATGAATTCAAGCAACAGTAGTTAGTCTTCTAGGATTTTACATCTTAAGAGTTTTCTTGACGACCAAATGTTGTAGGGTCAAGTAGCCTTGAGATTAGTCGAGATGTGTGCAAATTGGCAAAGATAGTCATAGATTAGAAAAAAATCATTTGGCAATCTTATGTTTTGCGTAGTAACATTTTCCAGTGATAATAGTGAGCTATAGAGTTATGATTATCATTGTCTTTCAGGGTCTATCGACATACATTAGGACCATGCTCTCTACCCAAGTAAGGCCATTTTATTATATATATATATATATATTAACATGTGCAGTTCATTTTCTTCTAAATTTAATATGCATTTACGCCAAATCTTTCCTAGGCTCTCCTGAGCGCCATTGGGGTCGGAGAGCAATCAGCAACTGTCATTGGTGCAACATTTCAGGTAAATTCAAAACTGAACTTTTGATAATTGATCTCAAGTTTTTGTGGCTTGGAAGATAGATACCTGTAATGAATGTGCTGTTAGTTAATAAATTTCTCTTTCTTTTCTGTTGCAACTTTTCCAGTGGTTTTTGAGGGATTTAACTGGAATGATTGGAGGTATCTTATTCACATTTTACCAGGTGTGCTGTTCTCTTCTGTAATCATAAATAAATCTATATCTGATTTACTTGCATAGTAATTTTCTTGAAAATTTGTTCCATAATAGCGTAAAATGGTGATGGGACTGCTAAGGATTGATTGAAGCAGATACAATTTTATACTTAGTCTTCTCCTGATAAATTCTTTTGTAATCACAGCCTTTAAATGGTTATAAACAACTGGAAGGTTTTCTTTTGCTAGTTTTTTCGGGGAGGGGTAATCTCTACCCGTTGCCCTTAGGTTGTCTCTTTTGTTCCTTTTGATGAATACACACGTGTTTCCTATCGAAAAAGAAAAAAAAAAAAAAAATAGTCTTCTCCTATCAAATTCAATATTTTGTTGTAATAATCTTTATAGAATTCAAGATTTGTAGAGTTAGTCTAGAATTCTGTTCACCATTTTTATTATGAATCCTCTTTCTTGGTTATGATATAGCAACAACAATTGTCCATTTCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTGTATTTTCCCCCTTATTCCTTACTTAACCTGCAATAAGTTCTCTTTCTAGGACAAGTACATGCAGAAATGTGGGTATCTAGTGGATTAGACTTATCCATTTCCTTCTGATTTTTCCTTTATATCTTTTCCGTGGAGAGTTTCCATTGTAATGTAAATTATCATCTGCTTAAACCGTTGTTCATAGATAAGCAAACTAACCTACAGCCATGGAATTGTTAAAGTAAATAGATCTCTAATTTTCGGAAAGGTTACTACACTGAGCATTTTCACTTTTCCATGTTGCATTTTGAATTTTATGTCCTAAGATAACCAACGACTTTGTACTGAACAGGTATGTTGATGGACCTTGTTTCCCCCTTGTTTCCTTCAGCATTTATGCTCATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCAGTAAGTCCTTACAGATTTTAGAAATTTTCATGTAAACATGGTATTGTCATGTAAATGTTGAGATTTTTCTAATGGTATCGTGTTTCTACGTTGTTATAAATAATGTTATATTAGTTCAGTGAAAAAAACATTTTCAAATTGATATTTAGCTCACATTTCATCTTTAGTTCAGTGATGAATTTAAACTTTAAACTTTAAACATTTAATTTCATTGGAGTACACCATAAACTTCGATAAGTATTAAATTTGTACACATTCAAAACCAAAATAGAAAATTACCCTTTAATCAATCAATAAATCATGTAAAGTTCAACTAACAAAACACCAAAGTGTTGACTCAATAGGGACCAAGCCAATTCGAGAAACGCCCGATTGTTGCTAAAAGACATCCAATACAGTTTGAAGGTCTAGTACCTAAAAGATATAGCCAAAAAAACTTTAGAAAAATGGAACTCAAGAGGAAAGGAGAGTATTTTTGGTGGTTAGGGTGGTCATGTGCTGTAGACTTATGGATGATACTAATTCGGTGTATTCAACAGAAAATAAGCATGCTGTTTGGACTTCATATTTTAATTAATTGGATGTATTCCTTAATGCTAACTATAGATTTCAATCCAAATCAGCCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGTATAGCGCAAGCCACTTTCCAGGTGAAGAATGATCTCTGATCCAGATATATTGTAATGACAATTGTCACTCTTGCACCAATAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGGTGAGTTATTTGCTTGAACAAACCCTCGGTTTATAGTATATGTTGACGTGACATTTAGTTTTTAAATTTCTGAATTGGTAAGAGTTCAAATTTTAGACCATCATCTCTTATGAACACATTGTTAACTTTTCTTAATCAAATTTTCTTAATAGTATTTTAGGTTCAAAATGTTTATTCGTCTCCATAAAAAGAAAAAAGATGGAAAAATATATATTTATGTAGTCATGGTAGATTTCAAACATGCCTTGGTAGGTCTGTCACAATCTTGTAAAATTCTGCTTGTGAATTTGTGCAGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGGTGATGCCCGATGTCTTTTTCTTTCCTGTTGTTACTGATCATGATTCATTTCCTGGATGGTTCAGGGCTATTTGTATGTATGTACACTGTAAATTCCATTCACACGCGTTAATATGTGATTTATGCGACAAAACTATTTTTAAATCTACCTCTTTCTGCGATAAATAAAAATTGCTGCACTCTAATCTCTTTGTTTAAATAAAAGTTACCATGCGACTGAACCTGCATTCAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATCACTCAGAAATGTGAGTTTTTACATACCAGCCTTTTGACTTCCTTGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCTTATTATTTAGATAAGAAAAAGACATTCATTTGACAAATAAATGACAAAGAAGCAGGTTAAGCCAAAGTGTTATAAAAAAGGTTTTCAAATGGACAAGTTTTGGATGCAATAATTACAAGACTCAATATTGAAAGAACTCCCAAGAGTTTAAAATGCTGGCATATGTGGAAGCGAAAATAGAAGTGGTTGTATATGTACTATTGTTTACATTAAAAAATAAATAAATAAACTAGCAACACGATACTCCTTAAATAGATCAATCAAATATGGTTTATCATTAGGATTTAGGCAATATAGTACGTCCGTTGCAAGTGTAAAGAAATTTACTTTTATTTAAAGAACACATGCGATTGGAAGACTGAAGTTTGTCTGGTTATCTGTCATAGTTTTTCTTTCCACAGTTCATAAAACTGATATATAGCTAATAACATTATTTTGGTATAGGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGGTTGGAGTACTTTTAAATATTTTCCGAAAGATAGGTTTGAGCTGTATTTTATAACTCCATCTGATCATATGTTATTCGTTTGCCAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTTCAATCATTCTTTCATGCACTTGTTGCGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGGTTTTTTTTTTTTTTTTTTTTTCTCTTTAATGTTTCTGAACTTCATTAAGTTGCAAATTTTCTCTTCCGTTCTTCTTTTCTTAGCCTTTTCTTTTTGGTTATAAAAAATGATAAATTTTCATTAATTTTTTGAGAAAATGATACGAAAAACTTCCTCAAAAGCAACTCACAAAAAACCACTTCAACAAGACTGCAAGAATTAATTAAAGAAGGGTAGAAATTTAGCAAACGGTCCAAATCTAATCTTAATCTCCTCTCTTCTCGCTATAATTTATAAGGTGTCCTTTCATCGAACTCCCAGTAGGCAGCTTTTTGTTTTACTCCCACAACATTTGCCTTTTCCCGGTGGTTCAACTGTTCAACTGTTCTCCCAATTAGCAGAGTATATACATAAAGCCTGTTTAAATTTAAACCTCCAGCCTTTGGCTGAAGGGACGGAGAAAAAGGAGTTCGAACCTTTTGTTAGGAATCACGACCTTACACAATGATATGATATTGTCACTTTGAGCATAAGTTCTCATGGCCTTGCTTTAGGCTTCTCCAAAAGGCCTCGTACCAATGGAGATGTATTTGTTACTTATAAACTCATGATCAACCCCTTAATTAGCTGATGTGAGACTCCTCAACACCTTTTACTCATTATTCACATATAGAGGACACTAGTCTGGAGGCAAAACCATCTAGAGCAGAACCGTTCTCGAATGATACCTACATTTGCTCCTGCCATCCATAGCCTAAAAAAGAGAGAAAGTGATAGAGAGAGAATGTCTGCCCGTTCAGAATTCCAGATACATGGATGCATGAATTGCATTGTAGGAAGATATTACTTGCCAACACGTTACGTATGGGAAAAATCATGCTTTTCTTTGAAGCTTGCTATAGTTATCTGTAAATTGGAATAGAGTTGGAACTATATGCCTTGGACTTCTGTACATTCTTTCGTATAGAGTACAATTCTCAGCCACATGTGATGATATTTTCATTACTTTACATTCGGTATATTTATAATTTTCATTGCATTTACACCATTCCATTACCTTTTAGCTGAAGCTATCGGGTTGGAAGACAGATCGTCTACTATCTCCGTCAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAA

mRNA sequence

ATGGCGTCCAAAATGGCGATTCTTTCTCGAACTCAAACCATAATCAGAAACTCGAACCTCAACAATGTCTGCTTCTTCAAGCCCATTACCACCTTCACATTTCTTTCTCAAGAACCTCAGCTCGCTAATGAACCAGCGGACATTCCATCAACTCCACTTCCTCCAAATCCCGCCTCCGGCAGCCCTCTTTACAACGAGAACTGGCGTAATCCAATACCCAACGCTTCTCGGACTCTGTCAATGATCCCCCTCGGGTTCCTTAACCAATCCCCGAGCTCTCGCATTGAGGCATTGTCTCAAACGCTCGATGTTCAGAGCTTGTTGAACGTTTTTGCTGATTGGATGGCTTCCCAGCGCTGGGAAGATATGAAGCAGTTGTTTGAATTTTGGATTCGGTCTCTGGATAAGAATGGCAAGCCTAATAAGCCGGATGTTAACTTGTATAACAATTATTTGAGGGCTAACTTGATGGTTAACGCCTCGGCTGGGGAGCTTCTGGATCTAGTGGCTCAAATGGAGGACTATGCGATATCACCCAACACTGCATCATTCAATTTAGTATTAAAGGCGATGTATCAGGCTAAGGAGACTCAGGCCGCTGAAAAATTGATTGAACGTATGTTGCAGACAGGAGAAGAGTCAATGCCTGATGATGAATCATATGATTTAGTAATTGGAATGCTGTTGTCAACAGATCAGATTGATGCTGCATTGAAATATATTGACTTGACTTTAAAATCAGGTCATATGCTGTCGTTGAAAGTGTTCACTGAATGTGTGCGGAGCTGCGTTAAAAAAGGCAGGCTGGACACACTGGTGTCGGTAATTGATAGGTGCAAGGCAACTGTTCAGAATAAAGCTCTTTGCCCAACATGGAACTTGTGTAATTTTATCGCTGAAGTAGCAACGCAAGAGGATAATAGTAAACTTGCTTATTATGCTCTAGAATTTATGGCCAGATGGATTGCTCGAGGTGAAAATGCGAGGCCTCCAGTTCATCTTTCAGTAGATGAAGGAATAGTTGTATCAGCTCTTGGAACTGCAGGTAGAACCTACAGCTCTTCTCTTTTAGATGCATCTTGGGCAATTCTAAAGCGCTCATTGGGACAAAAGAAGGTTCCAAATCCTGAATCTTACCTTGGAAAGATTTATGCTCTTGCATCATTTGGGAATCTGCAAAGGGCCTTTACTACCCTACGTGAATTTGAAGAGGCTTATAGGACTGCTGATGATGGAGCTGGTGAAGAAATGTTTTCTCCATTCACTTCTTTATATCCATTAGTTGTGGCATGCTCTAAGAAGGGTTTTGAGACCCTGGACACGGTTTATTTTCAACTGGAAAACTTGAGCCGTGCAGATCCTCCTTACAAGTCTGTTTCTGCATTGAATTGTGTGATTTTAGGCTGTGCAAATATATGGGACCTTGATCGTGCGTACCAAACGTTTGAAGCAATTGGTTCCAGTTTTGGTTTGACCCCTGATATCCATTCATACAATGCTCTGATATACGCATTTGGAAGGCTAAAGAAGACATTTGAAGCTGCAAGGGTGTTCGAACACTTGGTAGGTTTGGGCGTCAAACCAAATGCAAAATCTTATTCGCTGCTTGTTGATGCTCATATCATTAACCGCGATCCCAAATCAGCTCTCTCCGTGATCGATAACATGGTAACTGCTGGATTTGTACCTTCAAAAGAAATGCTGAAGAAGGCAAGGAGGCGATGTATGCGAGAGATGGATTACCCTAGTAACGATAAGGGACATACTGTTCAATCTGGACTACGGCACCAATTATGTTGCATAATAGGCTTTCATTCCTACTTGGAAAATCTGAGCTGCGCTAATTGTAAACGTGGTAAAGGATTCTGCCTCTCTTTTCGGTCTGAGAGTCTAAGGCCTTCAAGCTTCGAATCACCTCTCATGGATCGGAAACATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATCCAAAGATCTGGTTCTCGTTTCAAAATCGTGGGGAGACGATTCTTTGACGCGTTTGTACCGGAGGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGGGTCTATCGACATACATTAGGACCATGCTCTCTACCCAAGCTCTCCTGAGCGCCATTGGGGTCGGAGAGCAATCAGCAACTGTCATTGGTGCAACATTTCAGTGGTTTTTGAGGGATTTAACTGGAATGATTGGAGGTATCTTATTCACATTTTACCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTTGATGGACCTTGTTTCCCCCTTGTTTCCTTCAGCATTTATGCTCATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCACCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATCACTCAGAAATGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTTCAATCATTCTTTCATGCACTTGTTGCGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGCTGAAGCTATCGGGTTGGAAGACAGATCGTCTACTATCTCCGTCAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAA

Coding sequence (CDS)

ATGGCGTCCAAAATGGCGATTCTTTCTCGAACTCAAACCATAATCAGAAACTCGAACCTCAACAATGTCTGCTTCTTCAAGCCCATTACCACCTTCACATTTCTTTCTCAAGAACCTCAGCTCGCTAATGAACCAGCGGACATTCCATCAACTCCACTTCCTCCAAATCCCGCCTCCGGCAGCCCTCTTTACAACGAGAACTGGCGTAATCCAATACCCAACGCTTCTCGGACTCTGTCAATGATCCCCCTCGGGTTCCTTAACCAATCCCCGAGCTCTCGCATTGAGGCATTGTCTCAAACGCTCGATGTTCAGAGCTTGTTGAACGTTTTTGCTGATTGGATGGCTTCCCAGCGCTGGGAAGATATGAAGCAGTTGTTTGAATTTTGGATTCGGTCTCTGGATAAGAATGGCAAGCCTAATAAGCCGGATGTTAACTTGTATAACAATTATTTGAGGGCTAACTTGATGGTTAACGCCTCGGCTGGGGAGCTTCTGGATCTAGTGGCTCAAATGGAGGACTATGCGATATCACCCAACACTGCATCATTCAATTTAGTATTAAAGGCGATGTATCAGGCTAAGGAGACTCAGGCCGCTGAAAAATTGATTGAACGTATGTTGCAGACAGGAGAAGAGTCAATGCCTGATGATGAATCATATGATTTAGTAATTGGAATGCTGTTGTCAACAGATCAGATTGATGCTGCATTGAAATATATTGACTTGACTTTAAAATCAGGTCATATGCTGTCGTTGAAAGTGTTCACTGAATGTGTGCGGAGCTGCGTTAAAAAAGGCAGGCTGGACACACTGGTGTCGGTAATTGATAGGTGCAAGGCAACTGTTCAGAATAAAGCTCTTTGCCCAACATGGAACTTGTGTAATTTTATCGCTGAAGTAGCAACGCAAGAGGATAATAGTAAACTTGCTTATTATGCTCTAGAATTTATGGCCAGATGGATTGCTCGAGGTGAAAATGCGAGGCCTCCAGTTCATCTTTCAGTAGATGAAGGAATAGTTGTATCAGCTCTTGGAACTGCAGGTAGAACCTACAGCTCTTCTCTTTTAGATGCATCTTGGGCAATTCTAAAGCGCTCATTGGGACAAAAGAAGGTTCCAAATCCTGAATCTTACCTTGGAAAGATTTATGCTCTTGCATCATTTGGGAATCTGCAAAGGGCCTTTACTACCCTACGTGAATTTGAAGAGGCTTATAGGACTGCTGATGATGGAGCTGGTGAAGAAATGTTTTCTCCATTCACTTCTTTATATCCATTAGTTGTGGCATGCTCTAAGAAGGGTTTTGAGACCCTGGACACGGTTTATTTTCAACTGGAAAACTTGAGCCGTGCAGATCCTCCTTACAAGTCTGTTTCTGCATTGAATTGTGTGATTTTAGGCTGTGCAAATATATGGGACCTTGATCGTGCGTACCAAACGTTTGAAGCAATTGGTTCCAGTTTTGGTTTGACCCCTGATATCCATTCATACAATGCTCTGATATACGCATTTGGAAGGCTAAAGAAGACATTTGAAGCTGCAAGGGTGTTCGAACACTTGGTAGGTTTGGGCGTCAAACCAAATGCAAAATCTTATTCGCTGCTTGTTGATGCTCATATCATTAACCGCGATCCCAAATCAGCTCTCTCCGTGATCGATAACATGGTAACTGCTGGATTTGTACCTTCAAAAGAAATGCTGAAGAAGGCAAGGAGGCGATGTATGCGAGAGATGGATTACCCTAGTAACGATAAGGGACATACTGTTCAATCTGGACTACGGCACCAATTATGTTGCATAATAGGCTTTCATTCCTACTTGGAAAATCTGAGCTGCGCTAATTGTAAACGTGGTAAAGGATTCTGCCTCTCTTTTCGGTCTGAGAGTCTAAGGCCTTCAAGCTTCGAATCACCTCTCATGGATCGGAAACATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATCCAAAGATCTGGTTCTCGTTTCAAAATCGTGGGGAGACGATTCTTTGACGCGTTTGTACCGGAGGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGGGTCTATCGACATACATTAGGACCATGCTCTCTACCCAAGCTCTCCTGAGCGCCATTGGGGTCGGAGAGCAATCAGCAACTGTCATTGGTGCAACATTTCAGTGGTTTTTGAGGGATTTAACTGGAATGATTGGAGGTATCTTATTCACATTTTACCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTTGATGGACCTTGTTTCCCCCTTGTTTCCTTCAGCATTTATGCTCATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCACCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATCACTCAGAAATGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTTCAATCATTCTTTCATGCACTTGTTGCGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGCTGAAGCTATCGGGTTGGAAGACAGATCGTCTACTATCTCCGTCAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAA

Protein sequence

MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASGSPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRWEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPNTASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKYIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAEVATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDASWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSPFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAHIINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKGHTVQSGLRHQLCCIIGFHSYLENLSCANCKRGKGFCLSFRSESLRPSSFESPLMDRKHPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEMKELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYVPDQASRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKID

Homology

[Close]

BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot
Match: Q9FZD1 (Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g26460 PE=1 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 4.6e-229
Identity = 397/596 (66.61%), Postives = 479/596 (80.37%), Query Frame = 0


Query: 1   MASKMAILSRTQTI--IRNSNLNNVCFFKPITTFTFLSQEPQLANEPAD-------IPST 60
           MAS +   SR   +  ++ +   +    + I+   FLSQ+P LA E  D         ST
Sbjct: 1   MASHLFTRSRISLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDPSNHQSTST 60

Query: 61  PLPPNPASGSPLYNENWRNPIPNA-SRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNV 120
           PLPPNPA+GSPLY ENWR+PIPN  S   S++PLGFLNQ+P+ RI ALS+TLD+ SLLN+
Sbjct: 61  PLPPNPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLNM 120

Query: 121 FADWMASQRWEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVA 180
           FADW ASQRW DMKQLFE W+RSLDKNGKPNKPDVNLYN+YLRANLM+ ASAG++LDLVA
Sbjct: 121 FADWTASQRWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVA 180

Query: 181 QMEDYAISPNTASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLS 240
            ME++++ PNTAS+NLVLKAMYQA+ET+AA KL+ERML  G++S+PDDESYDLVIGM   
Sbjct: 181 PMEEFSVEPNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFG 240

Query: 241 TDQIDAALKYIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCP 300
             + D A+K +D  LKSG+MLS  VFTECVRSCV KGR DTLVS+I+RCKA  +NK+LCP
Sbjct: 241 VGKNDEAMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCP 300

Query: 301 TWNLCNFIAEVATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGR 360
           +W LCN+IAEVA QEDNSKLA+YA EFM +WI RGE ARP V  SVDEG+VV+ L +A R
Sbjct: 301 SWILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAAR 360

Query: 361 TYSSSLLDASWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTAD 420
           T SSSL++ SW ILK+SL  +K  NP SY+ KI A AS GNLQ+AFT+L E E AY  ++
Sbjct: 361 TCSSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSE 420

Query: 421 DGAGEEMFSPFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCA 480
               EEM SPFTSLYPLVVACSKKGFETLD VYFQLE+LS+ D PYKSV+ALNC+ILGCA
Sbjct: 421 KEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCA 480

Query: 481 NIWDLDRAYQTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNA 540
           N WDLDRAYQTFEAI +SFGLTP+I SYNAL+YAFG++KKTFEA  VFEHLV +GVKP++
Sbjct: 481 NTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDS 540

Query: 541 KSYSLLVDAHIINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 587
           ++YSLLVDAH+INRDPKSAL+V+D+M+ AGF PS+E LKK RRRC+REMD  ++D+
Sbjct: 541 RTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQ 596

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BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot
Match: Q84JB8 (Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 5.9e-160
Identity = 294/429 (68.53%), Postives = 347/429 (80.89%), Query Frame = 0


Query: 650  VFLEEWNGSSLSELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYV 709
            + LEEWNGSS ++L KTATIT S SLSIQRS +RF  V RR   AFVPEGFP SVTPDYV
Sbjct: 12   ITLEEWNGSSSTKLFKTATITASSSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYV 71

Query: 710  PFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTF 769
             FQ+WD+LQGLSTY + MLSTQALLSAIGVGE+SATVIGATFQWFLRD TGM+GGILFTF
Sbjct: 72   GFQLWDTLQGLSTYTKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTF 131

Query: 770  YQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATR 829
            YQGSNLDSNAKMWRLVAD MND+GMLMDL+SPLFPSAF+++VCLGSLSRSFTGVASGATR
Sbjct: 132  YQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATR 191

Query: 830  AALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFH 889
            AALTQHFALQ+NAADISAKEGSQET+ATM+GM++GMLLAR T G P+AIWLSFLSLT+FH
Sbjct: 192  AALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFH 251

Query: 890  MYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIK 949
            MYANY+AV CL L SLN +R SI L HFIQTGQVLSP+QVS ME VLP W +S    + K
Sbjct: 252  MYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSK 311

Query: 950  LIHTRVRLGERISSLHHSEMKELLQLAGANSNK-VKYLLMERKSIICVIVRKDATANDIF 1009
             +H RV+LG R+SSL   +M +LL   GA+S K  KYLL   K  + VI+ KD+   D+ 
Sbjct: 312  PLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLLAHIKGNVSVILHKDSKPADVL 371

Query: 1010 QSFFHALVAAYVPDQA-SRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWV 1069
            +S+ HA+V A + +++ S + E  +W+DKHY++ + KL+  GWKT+RLLSPS+ WRANW+
Sbjct: 372  KSYIHAIVLANLMEKSTSFYSEGEAWIDKHYDELLHKLRSGGWKTERLLSPSITWRANWI 431

Query: 1070 CSPRDEKID 1077
                  K D
Sbjct: 432  SHTSAAKFD 440

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BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot
Match: Q91W34 (RUS family member 1 OS=Mus musculus OX=10090 GN=Rusf1 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-65
Identity = 147/399 (36.84%), Postives = 226/399 (56.64%), Query Frame = 0


Query: 696  VPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFL 755
            +P+GFP SV+PDY+P+Q+WDS+Q  ++ +   L+TQA+L  +GVG   A+V  AT  W +
Sbjct: 76   LPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLV 135

Query: 756  RDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGS 815
            +D TGM+G I+  +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   +
Sbjct: 136  KDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSN 195

Query: 816  LSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCP 875
            L++   GVA GATRAALT H A +NN AD+SAK+ SQETV  + G+ + +L+  +   CP
Sbjct: 196  LAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCP 255

Query: 876  LAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHV 935
                  F+ LT  H+YANY+AV  L L +LN  R  + L+HF+Q G+VL P   ++ME  
Sbjct: 256  SLSLGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVLEPASANQME-- 315

Query: 936  LPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEMKELLQLAGANSNKVKYLLMERKS--I 995
             P W   W   S+ L    V L   +SS+  SE+K+L++      +   YLL   KS   
Sbjct: 316  -PLWTGFWPSLSLSL---GVPLHHLVSSV--SELKQLVE-----GHHEPYLLCWNKSRNQ 375

Query: 996  ICVIVRKDATANDIFQSFFHALV-------------AAYVPDQASRHLESLSW------- 1055
            + V + ++A    + ++  H L+              A +  Q     +  SW       
Sbjct: 376  VQVALSQEAGPETVLRAATHGLILGALQEDGPLPGELAELRHQVQADPKKESWILVRETH 435

Query: 1056 --MDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSP 1071
              +D  +  F++ L+ +GWKT++       WRA W  SP
Sbjct: 436  QVLDTLFPKFLKGLQAAGWKTEKHHLEVDEWRATWPLSP 461

[Close]

BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot
Match: Q5R8F6 (RUS family member 1 OS=Pongo abelii OX=9601 GN=Rusf1 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.2e-65
Identity = 146/398 (36.68%), Postives = 224/398 (56.28%), Query Frame = 0


Query: 695  FVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWF 754
            F+P+GFP SV+PDY+P+Q+WDS+Q  ++ +   L+TQA+L  IGVG   ATV  AT  W 
Sbjct: 77   FLPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWL 136

Query: 755  LRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLG 814
            ++D TGM+G I+F +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   
Sbjct: 137  VKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTS 196

Query: 815  SLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGC 874
            +L++    VA GATRAALT H A +NN AD+SAK+ SQET+  +VG+ + +L+  +  GC
Sbjct: 197  NLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGC 256

Query: 875  PLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEH 934
            P      F  LT  H+YANY+AV  L + +LN  R  + L+H++Q G+VL+P   ++ME 
Sbjct: 257  PGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRME- 316

Query: 935  VLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEMKELLQLAGANSNKVKYLLMERKSII 994
              P W   W   S+ L    V L   +SS+      EL QL   +         + ++ +
Sbjct: 317  --PLWTGFWPAPSLSL---GVPLHRLVSSVF-----ELQQLVEGHQEPYLLCWDQSRNQV 376

Query: 995  CVIVRKDATANDIFQSFFHALVAAYVPDQA--SRHLESL-----------SW-------- 1054
             V++ + A    I ++  H L+   +         LE L           SW        
Sbjct: 377  QVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVQAGPKKESWVIVKETHE 436

Query: 1055 -MDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSP 1071
             +D  +  F++ L+ +GWKT++       WRA W+ SP
Sbjct: 437  VLDMLFPKFLKGLQDAGWKTEKHQLEVDEWRATWLLSP 463

[Close]

BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot
Match: Q96GQ5 (RUS family member 1 OS=Homo sapiens OX=9606 GN=RUSF1 PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 9.4e-65
Identity = 145/398 (36.43%), Postives = 222/398 (55.78%), Query Frame = 0


Query: 695  FVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWF 754
            F+P+GFP SV+PDY+P+Q+WDS+Q  ++ +   L+TQA+L  IGVG   ATV  AT  W 
Sbjct: 77   FLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWL 136

Query: 755  LRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLG 814
            ++D TGM+G I+F +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   
Sbjct: 137  VKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTS 196

Query: 815  SLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGC 874
            +L++    VA GATRAALT H A +NN AD+SAK+ SQET+  + G+ + +L+  +  GC
Sbjct: 197  NLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGC 256

Query: 875  PLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEH 934
            P      F  LT  H+YANY+AV  L + +LN  R  + L+H++Q G+VL P   ++ME 
Sbjct: 257  PGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRME- 316

Query: 935  VLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEMKELLQLAGANSNKVKYLLMERKSII 994
              P W   W   S+ L    V L   +SS+      EL QL   +         + ++ +
Sbjct: 317  --PLWTGFWPAPSLSL---GVPLHRLVSSVF-----ELQQLVEGHQESYLLCWDQSQNQV 376

Query: 995  CVIVRKDATANDIFQSFFHALVAAYVPDQA--SRHLESL-----------SW-------- 1054
             V++ + A    I ++  H L+   +         LE L           SW        
Sbjct: 377  QVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPKKESWVVVKETHE 436

Query: 1055 -MDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSP 1071
             +D  +  F++ L+ +GWKT++       WRA W+ SP
Sbjct: 437  VLDMLFPKFLKGLQDAGWKTEKHQLEVDEWRATWLLSP 463

[Close]

BLAST of Csor.00g306900 vs. NCBI nr
Match: KAG6598638.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2134 bits (5529), Expect = 0.0
Identity = 1076/1076 (100.00%), Postives = 1076/1076 (100.00%), Query Frame = 0


Query: 1    MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
            MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1    MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61   SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
            SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61   SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121  EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
            EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN
Sbjct: 121  EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180

Query: 181  TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
            TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181  TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241  IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
            IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE
Sbjct: 241  IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300

Query: 301  VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
            VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301  VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361  WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
            WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP
Sbjct: 361  WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420

Query: 421  FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
            FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421  FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481  TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
            TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481  TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541  IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKGHTVQSGLRHQLCC 600
            IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKGHTVQSGLRHQLCC
Sbjct: 541  IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDKGHTVQSGLRHQLCC 600

Query: 601  IIGFHSYLENLSCANCKRGKGFCLSFRSESLRPSSFESPLMDRKHPQSEVFLEEWNGSSL 660
            IIGFHSYLENLSCANCKRGKGFCLSFRSESLRPSSFESPLMDRKHPQSEVFLEEWNGSSL
Sbjct: 601  IIGFHSYLENLSCANCKRGKGFCLSFRSESLRPSSFESPLMDRKHPQSEVFLEEWNGSSL 660

Query: 661  SELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGL 720
            SELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGL
Sbjct: 661  SELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGL 720

Query: 721  STYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAK 780
            STYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAK
Sbjct: 721  STYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAK 780

Query: 781  MWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQN 840
            MWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQN
Sbjct: 781  MWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQN 840

Query: 841  NAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCL 900
            NAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCL
Sbjct: 841  NAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCL 900

Query: 901  SLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGER 960
            SLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGER
Sbjct: 901  SLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGER 960

Query: 961  ISSLHHSEMKELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYV 1020
            ISSLHHSEMKELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYV
Sbjct: 961  ISSLHHSEMKELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYV 1020

Query: 1021 PDQASRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKID 1076
            PDQASRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKID
Sbjct: 1021 PDQASRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKID 1076

[Close]

BLAST of Csor.00g306900 vs. NCBI nr
Match: KAG7029573.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1163 bits (3008), Expect = 0.0
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK
Sbjct: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. NCBI nr
Match: XP_022962398.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1158 bits (2995), Expect = 0.0
Identity = 584/586 (99.66%), Postives = 585/586 (99.83%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKET+AAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPN ESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNLESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK
Sbjct: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. NCBI nr
Match: XP_023546997.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1154 bits (2984), Expect = 0.0
Identity = 579/586 (98.81%), Postives = 584/586 (99.66%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQT+IRNSNLNNVCFFKPITTFTFLSQEPQLANEP+DIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTLIRNSNLNNVCFFKPITTFTFLSQEPQLANEPSDIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKET+AAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCN+IAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEF ARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFTARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRT+DDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTSDDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINRDPKSALSVIDNMVTAGFVPSKEMLKK RRRCMREMDYPSNDK
Sbjct: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKVRRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. NCBI nr
Match: XP_022997083.1 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1142 bits (2953), Expect = 0.0
Identity = 573/586 (97.78%), Postives = 581/586 (99.15%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQT+IRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTLIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELL+LVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLNLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKET+AAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGH+LSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCN+I E
Sbjct: 241 IDLTLKSGHILSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIVE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEFMARWIARGENAR PVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFMARWIARGENARSPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRT+DDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTSDDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFE IGSSFGLTPDIHSYNALIYAFGRLKKTF AARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEEIGSSFGLTPDIHSYNALIYAFGRLKKTFAAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINR+PKS+LSVIDNMVTAGFVPSKEMLKK RRRCMREMDYPSNDK
Sbjct: 541 IINRNPKSSLSVIDNMVTAGFVPSKEMLKKVRRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL
Match: A0A6J1HEP6 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111462853 PE=4 SV=1)

HSP 1 Score: 1158 bits (2995), Expect = 0.0
Identity = 584/586 (99.66%), Postives = 585/586 (99.83%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKET+AAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPN ESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNLESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK
Sbjct: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL
Match: A0A6J1KCV2 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111492112 PE=4 SV=1)

HSP 1 Score: 1142 bits (2953), Expect = 0.0
Identity = 573/586 (97.78%), Postives = 581/586 (99.15%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRTQT+IRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG
Sbjct: 1   MASKMAILSRTQTLIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELL+LVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLNLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMYQAKET+AAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 TASFNLVLKAMYQAKETEAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGH+LSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCN+I E
Sbjct: 241 IDLTLKSGHILSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIVE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VATQEDNSKLAYYALEFMARWIARGENAR PVHLSVDEGIVVSALGTAGRTYSSSLLDAS
Sbjct: 301 VATQEDNSKLAYYALEFMARWIARGENARSPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRT+DDGAGEEMFSP
Sbjct: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTSDDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFE IGSSFGLTPDIHSYNALIYAFGRLKKTF AARVFEHLVGLGVKPNAKSYSLLVDAH
Sbjct: 481 TFEEIGSSFGLTPDIHSYNALIYAFGRLKKTFAAARVFEHLVGLGVKPNAKSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           IINR+PKS+LSVIDNMVTAGFVPSKEMLKK RRRCMREMDYPSNDK
Sbjct: 541 IINRNPKSSLSVIDNMVTAGFVPSKEMLKKVRRRCMREMDYPSNDK 586

[Close]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL
Match: A0A6J1KIJ9 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496072 PE=4 SV=1)

HSP 1 Score: 1101 bits (2847), Expect = 0.0
Identity = 549/586 (93.69%), Postives = 570/586 (97.27%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRT T+IRNSNLNNVC FKPITTFTFLSQEP LANEPAD+PSTPLPPNPASG
Sbjct: 1   MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTFLSQEPHLANEPADVPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNAS T S+IPLGFLNQSPSSRI+ALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           +DMKQLFE WIRSLDKNGKPNKPDVNLYNNYLRANLMVNA+AGELLDLVAQMEDYAISPN
Sbjct: 121 DDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           +ASFNLVLKAMYQA+ET+AAEKLIERMLQTG ESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 SASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCN+IAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VA QEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA+
Sbjct: 301 VAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAA 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSL QKKVPNPESYLGKIYALASFGNLQRAFTTL EFEEAYRT+DDGA EEMFSP
Sbjct: 361 WAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSV+ALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAI SSFGLTPDIHSYNAL+YAFG+LKKTFEAA+VFEHLVGLGVKPNA SYSLLVDAH
Sbjct: 481 TFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAAKVFEHLVGLGVKPNATSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           +INRDPKSALSVID+MVTAGF PSK+MLKK RRRC+REMDY SND+
Sbjct: 541 LINRDPKSALSVIDDMVTAGFAPSKQMLKKVRRRCIREMDYDSNDR 586

[Close]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL
Match: A0A6J1GHH4 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111454227 PE=4 SV=1)

HSP 1 Score: 1095 bits (2831), Expect = 0.0
Identity = 547/586 (93.34%), Postives = 567/586 (96.76%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRT T+IRNSNLNNVC FKPITTFTFLSQE QLANEP D+PSTPLPPNPASG
Sbjct: 1   MASKMAILSRTHTLIRNSNLNNVCSFKPITTFTFLSQESQLANEPVDVPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPNAS T S+IPLGFLNQSPSSRI+ALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNASMTQSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           +DMKQLFE WIRSLDKNGKPNKPDVNLYNNYLRANLMVNA+AGELLDLVAQMEDYAISPN
Sbjct: 121 DDMKQLFESWIRSLDKNGKPNKPDVNLYNNYLRANLMVNATAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           +ASFNLVLKAMYQA+ET+AAEKLIERMLQTG ESMPDDESYDLVIGMLLSTDQIDAALKY
Sbjct: 181 SASFNLVLKAMYQARETEAAEKLIERMLQTGGESMPDDESYDLVIGMLLSTDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCN+IAE
Sbjct: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNYIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VA QEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDA+
Sbjct: 301 VAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAA 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSL QKKVPNPESYLGKIYALASFGNLQRAFTTL EFEEAYRT+DDGA EEMFSP
Sbjct: 361 WAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRTSDDGAAEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSV+ALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAI SSFGLTPDIHSYNAL+YAFG+LKKTFEAARVFEHLV LGVKPNA SYSLLVDAH
Sbjct: 481 TFEAISSSFGLTPDIHSYNALMYAFGKLKKTFEAARVFEHLVSLGVKPNATSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           +INRDPKSALSVID+MV AGF PSK+MLKK RRRC+REMDY SND+
Sbjct: 541 LINRDPKSALSVIDDMVIAGFAPSKQMLKKVRRRCIREMDYDSNDR 586

[Close]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL
Match: A0A6J1BQT9 (pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004896 PE=4 SV=1)

HSP 1 Score: 1079 bits (2790), Expect = 0.0
Identity = 535/586 (91.30%), Postives = 564/586 (96.25%), Query Frame = 0


Query: 1   MASKMAILSRTQTIIRNSNLNNVCFFKPITTFTFLSQEPQLANEPADIPSTPLPPNPASG 60
           MASKMAILSRT T+IR SNLNNVCFFKPITTF FLSQEPQLANEP D+PSTPLPPNPASG
Sbjct: 1   MASKMAILSRTGTLIRTSNLNNVCFFKPITTFAFLSQEPQLANEPPDLPSTPLPPNPASG 60

Query: 61  SPLYNENWRNPIPNASRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNVFADWMASQRW 120
           SPLYNENWRNPIPN+S T S+IPLGFLNQSPSSRI+ALSQTLDVQSLLNVFADWMASQRW
Sbjct: 61  SPLYNENWRNPIPNSSLTPSLIPLGFLNQSPSSRIQALSQTLDVQSLLNVFADWMASQRW 120

Query: 121 EDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVAQMEDYAISPN 180
           EDMKQLFEFWIRSLDKNGKPNKPDV+LYNNYLRANLMVNA+AGELLDLVAQMEDYAISPN
Sbjct: 121 EDMKQLFEFWIRSLDKNGKPNKPDVSLYNNYLRANLMVNATAGELLDLVAQMEDYAISPN 180

Query: 181 TASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLSTDQIDAALKY 240
           TASFNLVLKAMY+A+ET+AAEKLIERMLQ+GE+SMPDDESYDLVIGMLL+ DQIDAALKY
Sbjct: 181 TASFNLVLKAMYRARETEAAEKLIERMLQSGEDSMPDDESYDLVIGMLLAMDQIDAALKY 240

Query: 241 IDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCPTWNLCNFIAE 300
           IDLTLKSG+MLSLKVFTECVRSC+ KGRLDTLVSVIDRCK T QNKALCPTWNLCN+IAE
Sbjct: 241 IDLTLKSGYMLSLKVFTECVRSCINKGRLDTLVSVIDRCKTTTQNKALCPTWNLCNYIAE 300

Query: 301 VATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGRTYSSSLLDAS 360
           VA QEDNSKLAYYALEFMARWIARGENARPPVHLSVDEG+VVSALGTAGRTYSSSLLDA+
Sbjct: 301 VAMQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGMVVSALGTAGRTYSSSLLDAA 360

Query: 361 WAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTADDGAGEEMFSP 420
           WAILKRSL QKKVPNPESYLGKIYALASFGNLQRAFTTL EFEEAYR +DDGAGEEMFSP
Sbjct: 361 WAILKRSLRQKKVPNPESYLGKIYALASFGNLQRAFTTLHEFEEAYRNSDDGAGEEMFSP 420

Query: 421 FTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCANIWDLDRAYQ 480
           FTSLYPLV+ACSKKGFETLDTVYFQLENLSRADPPYKSV+ALNCVILGCANIWDLDRAYQ
Sbjct: 421 FTSLYPLVMACSKKGFETLDTVYFQLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQ 480

Query: 481 TFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNAKSYSLLVDAH 540
           TFEAI SSFGLTPDIHSYNAL+YAFGRLKKTFEA+RVFEHLV LGVKPNA SYSLLVDAH
Sbjct: 481 TFEAISSSFGLTPDIHSYNALMYAFGRLKKTFEASRVFEHLVSLGVKPNATSYSLLVDAH 540

Query: 541 IINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 586
           +INRDPKSALS ID+MV AGF PSKEMLKK RRRC+RE+DY +ND+
Sbjct: 541 LINRDPKSALSAIDDMVIAGFSPSKEMLKKVRRRCIRELDYDTNDR 586

[Close]

BLAST of Csor.00g306900 vs. TAIR 10
Match: AT1G26460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 796.2 bits (2055), Expect = 3.3e-230
Identity = 397/596 (66.61%), Postives = 479/596 (80.37%), Query Frame = 0


Query: 1   MASKMAILSRTQTI--IRNSNLNNVCFFKPITTFTFLSQEPQLANEPAD-------IPST 60
           MAS +   SR   +  ++ +   +    + I+   FLSQ+P LA E  D         ST
Sbjct: 1   MASHLFTRSRISLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDPSNHQSTST 60

Query: 61  PLPPNPASGSPLYNENWRNPIPNA-SRTLSMIPLGFLNQSPSSRIEALSQTLDVQSLLNV 120
           PLPPNPA+GSPLY ENWR+PIPN  S   S++PLGFLNQ+P+ RI ALS+TLD+ SLLN+
Sbjct: 61  PLPPNPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLNM 120

Query: 121 FADWMASQRWEDMKQLFEFWIRSLDKNGKPNKPDVNLYNNYLRANLMVNASAGELLDLVA 180
           FADW ASQRW DMKQLFE W+RSLDKNGKPNKPDVNLYN+YLRANLM+ ASAG++LDLVA
Sbjct: 121 FADWTASQRWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVA 180

Query: 181 QMEDYAISPNTASFNLVLKAMYQAKETQAAEKLIERMLQTGEESMPDDESYDLVIGMLLS 240
            ME++++ PNTAS+NLVLKAMYQA+ET+AA KL+ERML  G++S+PDDESYDLVIGM   
Sbjct: 181 PMEEFSVEPNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFG 240

Query: 241 TDQIDAALKYIDLTLKSGHMLSLKVFTECVRSCVKKGRLDTLVSVIDRCKATVQNKALCP 300
             + D A+K +D  LKSG+MLS  VFTECVRSCV KGR DTLVS+I+RCKA  +NK+LCP
Sbjct: 241 VGKNDEAMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCP 300

Query: 301 TWNLCNFIAEVATQEDNSKLAYYALEFMARWIARGENARPPVHLSVDEGIVVSALGTAGR 360
           +W LCN+IAEVA QEDNSKLA+YA EFM +WI RGE ARP V  SVDEG+VV+ L +A R
Sbjct: 301 SWILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAAR 360

Query: 361 TYSSSLLDASWAILKRSLGQKKVPNPESYLGKIYALASFGNLQRAFTTLREFEEAYRTAD 420
           T SSSL++ SW ILK+SL  +K  NP SY+ KI A AS GNLQ+AFT+L E E AY  ++
Sbjct: 361 TCSSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSE 420

Query: 421 DGAGEEMFSPFTSLYPLVVACSKKGFETLDTVYFQLENLSRADPPYKSVSALNCVILGCA 480
               EEM SPFTSLYPLVVACSKKGFETLD VYFQLE+LS+ D PYKSV+ALNC+ILGCA
Sbjct: 421 KEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCA 480

Query: 481 NIWDLDRAYQTFEAIGSSFGLTPDIHSYNALIYAFGRLKKTFEAARVFEHLVGLGVKPNA 540
           N WDLDRAYQTFEAI +SFGLTP+I SYNAL+YAFG++KKTFEA  VFEHLV +GVKP++
Sbjct: 481 NTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDS 540

Query: 541 KSYSLLVDAHIINRDPKSALSVIDNMVTAGFVPSKEMLKKARRRCMREMDYPSNDK 587
           ++YSLLVDAH+INRDPKSAL+V+D+M+ AGF PS+E LKK RRRC+REMD  ++D+
Sbjct: 541 RTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQ 596

[Close]

BLAST of Csor.00g306900 vs. TAIR 10
Match: AT1G13770.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 566.6 bits (1459), Expect = 4.2e-161
Identity = 294/429 (68.53%), Postives = 347/429 (80.89%), Query Frame = 0


Query: 650  VFLEEWNGSSLSELRKTATITVSPSLSIQRSGSRFKIVGRRFFDAFVPEGFPSSVTPDYV 709
            + LEEWNGSS ++L KTATIT S SLSIQRS +RF  V RR   AFVPEGFP SVTPDYV
Sbjct: 12   ITLEEWNGSSSTKLFKTATITASSSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYV 71

Query: 710  PFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTF 769
             FQ+WD+LQGLSTY + MLSTQALLSAIGVGE+SATVIGATFQWFLRD TGM+GGILFTF
Sbjct: 72   GFQLWDTLQGLSTYTKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTF 131

Query: 770  YQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATR 829
            YQGSNLDSNAKMWRLVAD MND+GMLMDL+SPLFPSAF+++VCLGSLSRSFTGVASGATR
Sbjct: 132  YQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATR 191

Query: 830  AALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFH 889
            AALTQHFALQ+NAADISAKEGSQET+ATM+GM++GMLLAR T G P+AIWLSFLSLT+FH
Sbjct: 192  AALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFH 251

Query: 890  MYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIK 949
            MYANY+AV CL L SLN +R SI L HFIQTGQVLSP+QVS ME VLP W +S    + K
Sbjct: 252  MYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSK 311

Query: 950  LIHTRVRLGERISSLHHSEMKELLQLAGANSNK-VKYLLMERKSIICVIVRKDATANDIF 1009
             +H RV+LG R+SSL   +M +LL   GA+S K  KYLL   K  + VI+ KD+   D+ 
Sbjct: 312  PLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLLAHIKGNVSVILHKDSKPADVL 371

Query: 1010 QSFFHALVAAYVPDQA-SRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWV 1069
            +S+ HA+V A + +++ S + E  +W+DKHY++ + KL+  GWKT+RLLSPS+ WRANW+
Sbjct: 372  KSYIHAIVLANLMEKSTSFYSEGEAWIDKHYDELLHKLRSGGWKTERLLSPSITWRANWI 431

Query: 1070 CSPRDEKID 1077
                  K D
Sbjct: 432  SHTSAAKFD 440

[Close]

BLAST of Csor.00g306900 vs. TAIR 10
Match: AT1G13770.2 (Protein of unknown function, DUF647 )

HSP 1 Score: 461.1 bits (1185), Expect = 2.5e-129
Identity = 240/352 (68.18%), Postives = 286/352 (81.25%), Query Frame = 0


Query: 727  MLSTQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVA 786
            MLSTQALLSAIGVGE+SATVIGATFQWFLRD TGM+GGILFTFYQGSNLDSNAKMWRLVA
Sbjct: 2    MLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVA 61

Query: 787  DFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADIS 846
            D MND+GMLMDL+SPLFPSAF+++VCLGSLSRSFTGVASGATRAALTQHFALQ+NAADIS
Sbjct: 62   DLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQDNAADIS 121

Query: 847  AKEGSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLN 906
            AKEGSQET+ATM+GM++GMLLAR T G P+AIWLSFLSLT+FHMYANY+AV CL L SLN
Sbjct: 122  AKEGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLN 181

Query: 907  PQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHH 966
             +R SI L HFIQTGQVLSP+QVS ME VLP W +S    + K +H RV+LG R+SSL  
Sbjct: 182  FERSSILLTHFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPR 241

Query: 967  SEMKELLQLAGANSNK-VKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYVPDQA- 1026
             +M +LL   GA+S K  KYLL   K  + VI+ KD+   D+ +S+ HA+V A + +++ 
Sbjct: 242  LDMLQLLNGVGASSYKNAKYLLAHIKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKST 301

Query: 1027 SRHLESLSWMDKHYEDFIQKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKID 1077
            S + E  +W+DKHY++ + KL+  GWKT+RLLSPS+ WRANW+      K D
Sbjct: 302  SFYSEGEAWIDKHYDELLHKLRSGGWKTERLLSPSITWRANWISHTSAAKFD 353

[Close]

BLAST of Csor.00g306900 vs. TAIR 10
Match: AT3G45890.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-39
Identity = 112/391 (28.64%), Postives = 198/391 (50.64%), Query Frame = 0


Query: 696  VPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGATFQWFL 755
            +PEGFP+SVT DY+ + +W  +QG+++ I  +L+TQ+LL A+G+G + A    A   W L
Sbjct: 199  LPEGFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLG-KGAIPTAAAINWVL 258

Query: 756  RDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGS 815
            +D  G +  I+ + Y G + D + K WRL AD + +    M++++P+FP  F++I     
Sbjct: 259  KDGIGYLSKIMLSKY-GRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAG 318

Query: 816  LSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCP 875
              RS   +   ATR+     FA Q N A++ AK  +Q  V+  VG+ +G+++A       
Sbjct: 319  AGRSAAALIQAATRSCFNAGFASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANCIGTST 378

Query: 876  LAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHV 935
                 +F  +T  HMY N K+  C+ L +LNP R S+    ++ +GQ    ++V+  E +
Sbjct: 379  SLALAAFGVVTTIHMYTNLKSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVNDEEPL 438

Query: 936  LPT---------------WVSSWSLRSIKLIHTRVRLGERISSLHHSEMKELLQLAGANS 995
             PT                +SS +  +   I  R++LG ++S + H++ +E + L     
Sbjct: 439  FPTVRFSNMKSPEKLQDFVLSSEAKAAAADIEERLQLGSKLSDVIHNK-EEAIALFDLYR 498

Query: 996  NKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYVPDQA--------------SR 1055
            N+  Y+L E K   CV++++ +T  D+ +S F      ++   A               R
Sbjct: 499  NE-GYILTEHKGRFCVMLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGR 558

Query: 1056 HLESLSWMDKHYEDFIQKLKLSGWKTDRLLS 1058
               SL ++ + +E   +  +  GW T+ L++
Sbjct: 559  LHISLDYVRREFEHAKEDSESVGWVTEGLIA 585

[Close]

BLAST of Csor.00g306900 vs. TAIR 10
Match: AT5G01510.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-31
Identity = 104/385 (27.01%), Postives = 186/385 (48.31%), Query Frame = 0


Query: 693  DAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEQSATVIGAT-- 752
            D   P GFP SV+ DY+ + +W     ++ +I  +L T +LL A+GVG  S T   AT  
Sbjct: 117  DFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGVGSFSGTSAAATAA 176

Query: 753  -----FQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPS 812
                  +W  +D  G +G +L     GS  D + K WR+ ADF+   G   DL + L+PS
Sbjct: 177  ASAAAIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRMYADFIGSAGSFFDLATQLYPS 236

Query: 813  AFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGM 872
             F+L+   G+L+++        +   +  HFA+  N  +++AKE   E  A ++G+  G+
Sbjct: 237  QFLLLASTGNLAKAVARGLRDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFGI 296

Query: 873  LL---ARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQ 932
            L+     +    P  + L++ S+ L H++  Y+++  L   ++N +R  I ++  +    
Sbjct: 297  LIIDTPGLVKSFPFVL-LTWTSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSV 356

Query: 933  VLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLG---ERISSLHH--SEMKELLQLAG 992
            V      +K E++L      W     + +  R+  G   E +S L    S++K LL++  
Sbjct: 357  VPGYVDCNKRENIL-----LWQ----RFMKPRIIFGVSLEELSGLEKSVSKVKALLKM-- 416

Query: 993  ANSNKVKYLL----MERKSIICVIVRKDATANDIFQSFFHA------LVAAYVPDQASRH 1051
                K KY+L    + + +   V  + +AT+ D+ +  + A      +  ++    +  H
Sbjct: 417  --YTKEKYILTLNKLNKDTEFSVSFKVNATSRDVLRCLWQAYWLEENMEESFKDKDSVFH 476

The following BLAST results are available for this feature:

BLAST of Csor.00g306900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZD1	4.6e-229	66.61	Pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Arabidop...	[more]
Q84JB8	5.9e-160	68.53	Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1	[more]
Q91W34	1.1e-65	36.84	RUS family member 1 OS=Mus musculus OX=10090 GN=Rusf1 PE=1 SV=1	[more]
Q5R8F6	3.2e-65	36.68	RUS family member 1 OS=Pongo abelii OX=9601 GN=Rusf1 PE=2 SV=1	[more]
Q96GQ5	9.4e-65	36.43	RUS family member 1 OS=Homo sapiens OX=9606 GN=RUSF1 PE=1 SV=2	[more]

BLAST of Csor.00g306900 vs. NCBI nr


Match Name	Identity	Description
KAG6598638.1	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7029573.1	100.00	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_022962398.1	99.66	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucur...	[more]
XP_023546997.1	98.81	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucur...	[more]
XP_022997083.1	97.78	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like [Cucur...	[more]

BLAST of Csor.00g306900 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HEP6	99.66	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cuc...	[more]
A0A6J1KCV2	97.78	pentatricopeptide repeat-containing protein At1g26460, mitochondrial-like OS=Cuc...	[more]
A0A6J1KIJ9	93.69	pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbit...	[more]
A0A6J1GHH4	93.34	pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Cucurbit...	[more]
A0A6J1BQT9	91.30	pentatricopeptide repeat-containing protein At1g26460, mitochondrial OS=Momordic...	[more]

BLAST of Csor.00g306900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26460.1	3.3e-230	66.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G13770.1	4.2e-161	68.53	Protein of unknown function, DUF647	[more]
AT1G13770.2	2.5e-129	68.18	Protein of unknown function, DUF647	[more]
AT3G45890.1	1.1e-39	28.64	Protein of unknown function, DUF647	[more]
AT5G01510.1	1.8e-31	27.01	Protein of unknown function, DUF647	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 112..316 e-value: 2.1E-18 score: 68.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 445..584 e-value: 2.7E-20 score: 74.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 496..530 e-value: 4.7E-5 score: 21.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 493..539 e-value: 3.2E-7 score: 30.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 8.571795
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 529..563 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 494..528 score: 10.807899
IPR006968	Root UVB sensitive family	PFAM	PF04884	DUF647	coord: 687..920 e-value: 3.2E-85 score: 285.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..62
IPR044605	Pentatricopeptide repeat-containing protein At1g26460-like	PANTHER	PTHR47205	OS07G0599000 PROTEIN	coord: 1..592

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g306900.m01	Csor.00g306900.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding