Csor.00g305740 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g305740
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr18: 13055086 .. 13056951 (-)
RNA-Seq Expression	Csor.00g305740
Synteny	Csor.00g305740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTATCGAAACCTTCCTTCTTGACGCACCTCAAAACCCTAACCGGATCCCACCATTTGCTCCCGCACCATGCACCGGCTCCTCCCGTCGTCGCCCTTCGTTCTCTCTCTTTTGCTACGCCGGAGGAAGCTGCTGCGGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCTCCTCTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGCCTTAACCTCCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTGGAAGAAGCCGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGACCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCAAAGTACTCCGATTTGCTTTCACTCCACCGGTTTATTACACAGGCTGGTGTCGCTCCCAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACACTATAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCTCACGACTTACAGGATCTTGATTAAGGGGTTGGTAGATAACAACAAATTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTGTGAAAGGTTTCGTTCCAGACCCTATTATTTATCATCATCTGATGGTGGGCTGCCTGAAAAATTCGGATCCCGATGGAGTTTTTAAGCTATTTGAAGAATTGAAGGAGAAATTAGGAGGGGCTGTGGAAGTTGGAGTTGTTTATGGAAGCTTGATAAAGGGGTACTTTATAAGAGGAATGGAGGAGGAAGCAATGAAATTTTATGAGCAGACTGTGGGTGTTAATTCAGAAGTTAAGATGAGCGCCATTGCGTACAATTCTGTGCTTGATGCGTTATGCAAGAATGGAAAGTTTGATGAGGCCTTGGTGTTGTTTGATAGGATGATAAAGGAGCACAGTCCGCCCAGGCGTTTGACATTGAACTTGGGAAGCTTTAATGTGATAGTTGATGGATACTGCACAGAAGGGAGATTCAGAGATGCCGTTGAAATATTCGAGAAGATGGGTGATTACAGGTGTAGCCCAGATACTTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCCGAGGACCTTTACGGATCGATGGGTGATAAGGGAGTCAGCCCTGACGAGTTTACTTATGGCTTGTTGATGGATTATTGCTTTAAAGGGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTAGAATCCGGACTCAGACCCAGTATGGTAGTTTATAATAGATTGGTAGATGAGTTGGTCAAATTAGGGAAAATTGAGGAAGCAAATTCTTACTTTGACATGATGGTGAAGAAGATCAAGATGGAGGCCTCAAGCTATCGTTTTATAATTAAGGCGTTAAGTGAATCCGGGAAAGTAGATGAAATACTAAATGTGGTCAATACTCTTCTGGATGACGATGGGATTGAATTTACTGAAGAGTTGCAGGAGTTTGTAAGAGGTGAGCTGAGGAAGGAAGACAGAGAAGGGGATTTAGCTAAAGTTATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCGGCAGAGGCTGAGGCGGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAGGAATCTGCAGAGAACGAAATGCAATCTGGTCAGGAAGACACTGGTAAGACTGCACTACCGGAATCTAACCTTTGA

mRNA sequence

ATGGCATTATCGAAACCTTCCTTCTTGACGCACCTCAAAACCCTAACCGGATCCCACCATTTGCTCCCGCACCATGCACCGGCTCCTCCCGTCGTCGCCCTTCGTTCTCTCTCTTTTGCTACGCCGGAGGAAGCTGCTGCGGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCTCCTCTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGCCTTAACCTCCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTGGAAGAAGCCGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGACCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCAAAGTACTCCGATTTGCTTTCACTCCACCGGTTTATTACACAGGCTGGTGTCGCTCCCAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACACTATAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCTCACGACTTACAGGATCTTGATTAAGGGGTTGGTAGATAACAACAAATTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTGTGAAAGGTTTCGTTCCAGACCCTATTATTTATCATCATCTGATGGTGGGCTGCCTGAAAAATTCGGATCCCGATGGAGTTTTTAAGCTATTTGAAGAATTGAAGGAGAAATTAGGAGGGGCTGTGGAAGTTGGAGTTGTTTATGGAAGCTTGATAAAGGGGTACTTTATAAGAGGAATGGAGGAGGAAGCAATGAAATTTTATGAGCAGACTGTGGGTGTTAATTCAGAAGTTAAGATGAGCGCCATTGCGTACAATTCTGTGCTTGATGCGTTATGCAAGAATGGAAAGTTTGATGAGGCCTTGGTGTTGTTTGATAGGATGATAAAGGAGCACAGTCCGCCCAGGCGTTTGACATTGAACTTGGGAAGCTTTAATGTGATAGTTGATGGATACTGCACAGAAGGGAGATTCAGAGATGCCGTTGAAATATTCGAGAAGATGGGTGATTACAGGTGTAGCCCAGATACTTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCCGAGGACCTTTACGGATCGATGGGTGATAAGGGAGTCAGCCCTGACGAGTTTACTTATGGCTTGTTGATGGATTATTGCTTTAAAGGGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTAGAATCCGGACTCAGACCCAGTATGGTAGTTTATAATAGATTGGTAGATGAGTTGGTCAAATTAGGGAAAATTGAGGAAGCAAATTCTTACTTTGACATGATGGTGAAGAAGATCAAGATGGAGGCCTCAAGCTATCGTTTTATAATTAAGGCGTTAAGTGAATCCGGGAAAGTAGATGAAATACTAAATGTGGTCAATACTCTTCTGGATGACGATGGGATTGAATTTACTGAAGAGTTGCAGGAGTTTGTAAGAGGTGAGCTGAGGAAGGAAGACAGAGAAGGGGATTTAGCTAAAGTTATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCGGCAGAGGCTGAGGCGGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAGGAATCTGCAGAGAACGAAATGCAATCTGGTCAGGAAGACACTGGTAAGACTGCACTACCGGAATCTAACCTTTGA

Coding sequence (CDS)

ATGGCATTATCGAAACCTTCCTTCTTGACGCACCTCAAAACCCTAACCGGATCCCACCATTTGCTCCCGCACCATGCACCGGCTCCTCCCGTCGTCGCCCTTCGTTCTCTCTCTTTTGCTACGCCGGAGGAAGCTGCTGCGGAACGACGCCGTCGGAAGCGCCGCCTCCGCATCGAACCTCCTCTCTCTTCCTCCTCTGCTACTCGCCCTCAATCGCAGCCTCCTAAACCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGCCTTAACCTCCACAACCGCATTCTCACTCTCATTCGTGAAAATGATCTGGAAGAAGCCGCGCTTTTCACCCGCCATTCCATTTACTCCAATTGTCGACCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACAGCTTCGCCAATCAAAGTACTCCGATTTGCTTTCACTCCACCGGTTTATTACACAGGCTGGTGTCGCTCCCAATATTATTACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACACTATAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCTCACGACTTACAGGATCTTGATTAAGGGGTTGGTAGATAACAACAAATTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTGTGAAAGGTTTCGTTCCAGACCCTATTATTTATCATCATCTGATGGTGGGCTGCCTGAAAAATTCGGATCCCGATGGAGTTTTTAAGCTATTTGAAGAATTGAAGGAGAAATTAGGAGGGGCTGTGGAAGTTGGAGTTGTTTATGGAAGCTTGATAAAGGGGTACTTTATAAGAGGAATGGAGGAGGAAGCAATGAAATTTTATGAGCAGACTGTGGGTGTTAATTCAGAAGTTAAGATGAGCGCCATTGCGTACAATTCTGTGCTTGATGCGTTATGCAAGAATGGAAAGTTTGATGAGGCCTTGGTGTTGTTTGATAGGATGATAAAGGAGCACAGTCCGCCCAGGCGTTTGACATTGAACTTGGGAAGCTTTAATGTGATAGTTGATGGATACTGCACAGAAGGGAGATTCAGAGATGCCGTTGAAATATTCGAGAAGATGGGTGATTACAGGTGTAGCCCAGATACTTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCCGAGGACCTTTACGGATCGATGGGTGATAAGGGAGTCAGCCCTGACGAGTTTACTTATGGCTTGTTGATGGATTATTGCTTTAAAGGGAACAGGCCAGATGATGCAGCTGGATATTTTAGAAAAATGGTAGAATCCGGACTCAGACCCAGTATGGTAGTTTATAATAGATTGGTAGATGAGTTGGTCAAATTAGGGAAAATTGAGGAAGCAAATTCTTACTTTGACATGATGGTGAAGAAGATCAAGATGGAGGCCTCAAGCTATCGTTTTATAATTAAGGCGTTAAGTGAATCCGGGAAAGTAGATGAAATACTAAATGTGGTCAATACTCTTCTGGATGACGATGGGATTGAATTTACTGAAGAGTTGCAGGAGTTTGTAAGAGGTGAGCTGAGGAAGGAAGACAGAGAAGGGGATTTAGCTAAAGTTATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCGGCAGAGGCTGAGGCGGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAGGAATCTGCAGAGAACGAAATGCAATCTGGTCAGGAAGACACTGGTAAGACTGCACTACCGGAATCTAACCTTTGA

Protein sequence

MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDPIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANSYFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAENEMQSGQEDTGKTALPESNL

Homology

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BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot
Match: Q9M3A8 (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 1.1e-211
Identity = 378/611 (61.87%), Postives = 488/611 (79.87%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           M++SK +FL HL+TL+ S+    H     P +A+R +SFAT EEAAAERRRRKRRLR+EP
Sbjct: 1   MSISKAAFLNHLQTLSRSYR---HRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEP 60

Query: 61  PLSS-SSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           P++S + + + QSQ P+P   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAA
Sbjct: 61  PVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           L+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNIIT+NLIFQ Y
Sbjct: 121 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPD 240
           LD RKP+ A+EHYK  I++AP NPS+ T+RIL+KGLV N+ LE+AME+KE+M VKGFV D
Sbjct: 181 LDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVD 240

Query: 241 PIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKF 300
           P++Y +LM+GC+KNSD DGV KL++ELKEKLGG V+ GVVYG L+KGYF++ ME+EAM+ 
Sbjct: 241 PVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMEC 300

Query: 301 YEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNV 360
           YE+ VG NS+V+MSA+AYN VL+AL +NGKFDEAL LFD + KEH+PPR L +NLG+FNV
Sbjct: 301 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 360

Query: 361 IVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKG 420
           +V+GYC  G+F +A+E+F +MGD++CSPDTLSFNNL+ QLC+N +LAEAE LYG M +K 
Sbjct: 361 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 420

Query: 421 VSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEAN 480
           V PDE+TYGLLMD CFK  + D+ A Y++ MVES LRP++ VYNRL D+L+K GK+++A 
Sbjct: 421 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 480

Query: 481 SYFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGEL 540
           S+FDMMV K+KM+  +Y+FI++ALSE+G++DE+L +V+ +LDDD +  +EELQEFV+ EL
Sbjct: 481 SFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 540

Query: 541 RKEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSK-LFGNKEGEKE 600
           RK  REGDL K+MEEKER+KAEAKA E   AE +K++    +++L+  K +   KE  K 
Sbjct: 541 RKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKL 600

Query: 601 SAENEMQSGQE 610
             ENE    +E
Sbjct: 601 LWENEAGGVEE 606

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BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot
Match: Q9SY69 (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-81
Identity = 190/541 (35.12%), Postives = 301/541 (55.64%), Query Frame = 0


Query: 24  HHAPAP-PVVALRSLSFATPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQSPQN 83
           H  P P P +  R+++F++ EEAAAERRRRKRRLRIEPPL +     P + PPK    ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RD 133

Query: 84  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 143
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 144 AQLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 203
           A  R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 204 NPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDPIIYHHLMVGCLKNSDPDGVFK 263
            PS  TYR L KGLV   ++  A  L  EM  KG   D  +Y++L+ G L   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 264 LFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVL 323
            F+ELK K    V  G+V  + ++ +F +G ++EAM+ Y     ++ + +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 324 DALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMG 383
           +   K GK DEA  LF+ M+  H+PP  L++N  +  ++V+     G F +A+  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 384 DYRCSP----DTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKG 443
               S     D L + N++ + C  GML EAE  +     + +  D  ++  ++D   K 
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 444 NRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKI-EEANSYFDMMVKKIKMEASSY 503
            R DDA     +MV+  LR       R+  EL+K GK+ E A     M  ++ K + S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 504 RFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKVMEEKE 558
             +++ L +   +D+  ++V  ++  + +  T  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]

BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 6.2e-45
Identity = 107/412 (25.97%), Postives = 198/412 (48.06%), Query Frame = 0


Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLE 222
           +G  P++IT+N++   Y    + + A+     +++    +P + TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMTVKGFVPDPIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGS 282
           +AME+ + M  +   PD I Y  L+    ++S      KL +E++++  G     V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIK 342
           L+ G    G  +EA+KF       +S  + + I +N +L ++C  G++ +A  L   M++
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 EHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNN 402
           +   P  +T     FN++++  C +G    A++I EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSPSVVT-----FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 403 GMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVY 462
             +  A +    M  +G  PD  TY  ++    K  + +DA     ++   G  P ++ Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 463 NRLVDELVKLGKIEEANSYFD-MMVKKIKMEASSYRFIIKALSESGKVDEIL 514
           N ++D L K GK  +A    D M  K +K +  +Y  ++  LS  GKVDE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]

BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-41
Identity = 110/418 (26.32%), Postives = 199/418 (47.61%), Query Frame = 0


Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELK 228
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMTVKGFVPDPIIYHHLMVG-CLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGY 288
            EM +KGF  D IIY  L+ G C      DG   L + +K K+   V   V + +LI  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV---VAFSALIDCF 331

Query: 289 FIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPP 348
              G   EA + +++   +   +    + Y S++D  CK  + D+A  + D M+ +   P
Sbjct: 332 VKEGKLREAEELHKEM--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVD 468
           A++L+  M  + V PD  +Y +L+D       P+ A   F K+ +S +   + +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLGKIEEANSYF-DMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDG 525
            +    K+++A   F  + +K +K +  +Y  +I  L + G + E  +++   +++DG
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDG 557

[Close]

BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.2e-41
Identity = 115/432 (26.62%), Postives = 209/432 (48.38%), Query Frame = 0


Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILI 212
           +L+L + +   G+A N+ T +++   +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMTVKGFVPDPIIYHHLMVG-CLKNSDPDGVFKLFEELKEKLG 272
            GL    ++  A+EL + M   G  PD I  + L+ G CL   + + +  L +++ E   
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML-LIDKMVEY-- 226

Query: 273 GAVEVGVVYGSLIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFD 332
           G     V YG ++      G    AM+   +    N  +K+ A+ Y+ ++D LCK+G  D
Sbjct: 227 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLD 286

Query: 333 EALVLFDRMIKEHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLS 392
            A  LF+ M       + +T N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++
Sbjct: 287 NAFNLFNEM-----EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 346

Query: 393 FNNLIEQLCNNGMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMV 452
           F+ LI+     G L EAE+L+  M  +G++PD  TY  L+D   K N  D A      MV
Sbjct: 347 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 406

Query: 453 ESGLRPSMVVYNRLVDELVKLGKIEEANSYF-DMMVKKIKMEASSYRFIIKALSESGKVD 512
             G  P++  +N L++   K  +I++    F  M ++ +  +  +Y  +I+   E GK  
Sbjct: 407 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-- 463

Query: 513 EILNVVNTLLDD 523
             LNV   L  +
Sbjct: 467 --LNVAKELFQE 463

[Close]

BLAST of Csor.00g305740 vs. NCBI nr
Match: KAG6574256.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1200 bits (3105), Expect = 0.0
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY
Sbjct: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI
Sbjct: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV
Sbjct: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS
Sbjct: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR
Sbjct: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESNL 621
           ENEMQSGQEDTGKTALPESNL
Sbjct: 601 ENEMQSGQEDTGKTALPESNL 621

[Close]

BLAST of Csor.00g305740 vs. NCBI nr
Match: XP_023541985.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1170 bits (3028), Expect = 0.0
Identity = 606/620 (97.74%), Postives = 614/620 (99.03%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKPSFLTHLKTLTGSHHLL HHAPAPP+VALR LSFATPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFLTHLKTLTGSHHLLRHHAPAPPLVALRFLSFATPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           IIYH+LMVGCLKNSDPDGVFKL EELKEKLGGAVE GVVYGSLIKGYFIRGMEEEAMKFY
Sbjct: 241 IIYHYLMVGCLKNSDPDGVFKLCEELKEKLGGAVEDGVVYGSLIKGYFIRGMEEEAMKFY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI
Sbjct: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYCTEGRFRDA+EIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE+LYGSMGDKGV
Sbjct: 361 VDGYCTEGRFRDAIEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGSMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRP++VVYNRLVDELVKLGKIEEANS
Sbjct: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPNIVVYNRLVDELVKLGKIEEANS 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           YFDMMVKKIKM+ASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR
Sbjct: 481 YFDMMVKKIKMDASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDLAKVMEEKERVKAEAKAA+AEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLAKVMEEKERVKAEAKAADAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
           ENEMQSGQEDTGKTAL ESN
Sbjct: 601 ENEMQSGQEDTGKTALQESN 620

[Close]

BLAST of Csor.00g305740 vs. NCBI nr
Match: XP_022945141.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1159 bits (2997), Expect = 0.0
Identity = 604/620 (97.42%), Postives = 608/620 (98.06%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKPSFLTHLKTLTGSHHLL HHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFLTHLKTLTGSHHLLRHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSL RFITQAGVAPNIITHNLIFQ YL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLDRFITQAGVAPNIITHNLIFQMYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMTVKGFV DP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVSDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           IIYH+LMVGCLKNSDPDGVFKLFEELKEKLGGAVE GVVYGSLIKGYFIRGMEEEAMKFY
Sbjct: 241 IIYHYLMVGCLKNSDPDGVFKLFEELKEKLGGAVEDGVVYGSLIKGYFIRGMEEEAMKFY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           EQTVG NSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI
Sbjct: 301 EQTVGDNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV
Sbjct: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           SPDEFTYGLLMDYCFKGNRPDDAAGYFRK+VESGLRP++VVYNRLVDELVKLGKIEEANS
Sbjct: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKIVESGLRPNIVVYNRLVDELVKLGKIEEANS 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR
Sbjct: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDLAKVMEEKERVKAEAKAAEA     QKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLAKVMEEKERVKAEAKAAEA-----QKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
           ENEMQSGQEDTGKTALPESN
Sbjct: 601 ENEMQSGQEDTGKTALPESN 615

[Close]

BLAST of Csor.00g305740 vs. NCBI nr
Match: XP_023553006.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1071 bits (2769), Expect = 0.0
Identity = 548/620 (88.39%), Postives = 590/620 (95.16%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKP+F THLKTLT S HLL H APAPP+V LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMT+KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           +IYH+LMVGC+++SDPDGVFKLFEELKEKLGG VE GVVYGSL+KGYF++ MEEEAM+ Y
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           E+TVG NS VKMSAIAYNSVLDALCKNGKF EAL+LFDRM KEHSPPRRL ++LGSFNV+
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYC EGRF+DA+E+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE+LYG+MGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           +PDEFTYGLLMD CFK NRPDDAAGYFRKMVESGLRP++ VYNRLVDELVKLGKI EA +
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+F++KALSESG++DE+LNVV+TLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFMMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL K+MEEKERVKAEAKA EAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
            NEMQSGQED+GKT L ESN
Sbjct: 601 VNEMQSGQEDSGKTELAESN 619

[Close]

BLAST of Csor.00g305740 vs. NCBI nr
Match: KAG6576653.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1067 bits (2759), Expect = 0.0
Identity = 547/620 (88.23%), Postives = 588/620 (94.84%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKP+F THLKTLT S HLL H APAPP+V LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQS QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMT KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           +IYH+LMVGC+++SDPDGVFKLFEELKEKLGG VE GVVYGSL+KGYF++ MEEEAM+ Y
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           E+TVG NS VKMSAIAYNSVLDALCKNGKF EAL+LFDRM KEHSPPRRL ++LGSFNV+
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYC EGRF+DA+E+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE+LYG+MGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           +PDEFTYGLLMD CFK NRPDDAAGYFRKMVESGLRP++ VYNRLVDELVKLGKI EA +
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+FI+KALSESG++D++LNVV+TLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDKMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL K+MEEKERVKAEAKA EAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
            NEMQSGQED+GKT L ESN
Sbjct: 601 VNEMQSGQEDSGKTELAESN 619

[Close]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL
Match: A0A6J1G012 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111449469 PE=4 SV=1)

HSP 1 Score: 1159 bits (2997), Expect = 0.0
Identity = 604/620 (97.42%), Postives = 608/620 (98.06%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKPSFLTHLKTLTGSHHLL HHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPSFLTHLKTLTGSHHLLRHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSL RFITQAGVAPNIITHNLIFQ YL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLDRFITQAGVAPNIITHNLIFQMYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMTVKGFV DP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVSDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           IIYH+LMVGCLKNSDPDGVFKLFEELKEKLGGAVE GVVYGSLIKGYFIRGMEEEAMKFY
Sbjct: 241 IIYHYLMVGCLKNSDPDGVFKLFEELKEKLGGAVEDGVVYGSLIKGYFIRGMEEEAMKFY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           EQTVG NSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI
Sbjct: 301 EQTVGDNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV
Sbjct: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           SPDEFTYGLLMDYCFKGNRPDDAAGYFRK+VESGLRP++VVYNRLVDELVKLGKIEEANS
Sbjct: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKIVESGLRPNIVVYNRLVDELVKLGKIEEANS 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR
Sbjct: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDLAKVMEEKERVKAEAKAAEA     QKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLAKVMEEKERVKAEAKAAEA-----QKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
           ENEMQSGQEDTGKTALPESN
Sbjct: 601 ENEMQSGQEDTGKTALPESN 615

[Close]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL
Match: A0A6J1JB23 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482852 PE=4 SV=1)

HSP 1 Score: 1065 bits (2755), Expect = 0.0
Identity = 547/620 (88.23%), Postives = 589/620 (95.00%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKP+F THL+TLT S HLL H APAPP+V LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQP KPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMT+KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           +IY +LMVGC+++SDPDGVFKLFEELKEKLGG VE GVVYGSL+KGYF++ MEEEAM+ Y
Sbjct: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           E+TVGVNS VKMSAIAYNSVLDALCKNGKF EAL+LFDRM KEHSPPRRL ++LGSFNV+
Sbjct: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYC EGRF+DA+E+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLA+AE+LYG+MGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           +PDEFTYGLLMD CFK NRPDDAAGYFRKMVESGLRP++ VYNRLVDELVKLGKI EA +
Sbjct: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+FI+KALSESG++DE+LNVV+TLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KEDREGDL K+MEEKERVKAEAKA EAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
            NEMQSGQED+GKT L ESN
Sbjct: 601 VNEMQSGQEDSGKTELAESN 619

[Close]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL
Match: A0A6J1E509 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430665 PE=4 SV=1)

HSP 1 Score: 1065 bits (2755), Expect = 0.0
Identity = 547/620 (88.23%), Postives = 587/620 (94.68%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MALSKP+F THLKTLT S HLL H APAPP+V LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSA RPQSQPPKPQS QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL
Sbjct: 61  PLSSSSAARPQSQPPKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNA LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDNNKLERAMELKEEMT KGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           +IYH+LMVGC+++SDPDGVFKLFEELKEKLGG VE GVVYGSL+KGYF++ MEEEAM+ Y
Sbjct: 241 LIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           E+TVG NS VKMSAIAYNSVLDALCKNGKF EAL+LFDRM KEHSPPRRL ++LGSFNV+
Sbjct: 301 EETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYC EGRF+DA+E+FEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAE+LYG+MGDKGV
Sbjct: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEELYGTMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           +PDEFTYGLLMD CFK NR DDAAGYFRKMVESGLRP++ VYNRLVDELVKLGKI EA +
Sbjct: 421 NPDEFTYGLLMDSCFKANRADDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+FI+KALSESG++DE+LNVV+TLLDDDGIEF+EELQEFVRGELR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDL K+MEEKERVKAEAKA EAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 ENEMQSGQEDTGKTALPESN 620
            NEMQSGQED+GKT L ESN
Sbjct: 601 VNEMQSGQEDSGKTELAESN 619

[Close]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL
Match: A0A6J1CK90 (pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=3673 GN=LOC111011752 PE=4 SV=1)

HSP 1 Score: 1046 bits (2705), Expect = 0.0
Identity = 543/631 (86.05%), Postives = 583/631 (92.39%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           MA+SKP+F THLK LTGSH LL + APAP  V LR LSFA+PEEAAAERRRRKRRLRIEP
Sbjct: 1   MAVSKPTFFTHLKALTGSHRLLRYQAPAPLSVTLRFLSFASPEEAAAERRRRKRRLRIEP 60

Query: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRL LHNRILTLIR+NDLEEAAL
Sbjct: 61  PLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLTLHNRILTLIRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 FTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240
           DCRKPDTAMEHYKQLINDAPFN S TTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP
Sbjct: 181 DCRKPDTAMEHYKQLINDAPFNASPTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDP 240

Query: 241 IIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFY 300
           IIYH+LMVGC++NSD DGVFKLFEELKEKLGG VE GVVYGSL+KGYF++GMEEEAM+ Y
Sbjct: 241 IIYHYLMVGCVRNSDHDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKGMEEEAMRCY 300

Query: 301 EQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVI 360
           E+ VGVNS VKMSAIAYNSVLDALCK+GKF EAL+LFDRMIKEHSPPR L +NLGSFNV+
Sbjct: 301 EENVGVNSVVKMSAIAYNSVLDALCKHGKFGEALMLFDRMIKEHSPPRHLAVNLGSFNVM 360

Query: 361 VDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGV 420
           VDGYCTEGRF+DA+EIF+KMGDYRCS DTLSFNNLIEQLC NGML EAE+LY +MGDKGV
Sbjct: 361 VDGYCTEGRFQDAIEIFKKMGDYRCSTDTLSFNNLIEQLCKNGMLTEAEELYATMGDKGV 420

Query: 421 SPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEANS 480
           SPDEFTYGLLMD CFK NR DDAAGYFRKMVESGLRP++ VYNRLVDELVKLGKI+EA S
Sbjct: 421 SPDEFTYGLLMDSCFKENRSDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKIDEAKS 480

Query: 481 YFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELR 540
           +FD+MVKK+KM+ASSY+FI+KALSESGK+DE+LNVV+TLLDDDGIEFTEELQEFVRG+LR
Sbjct: 481 FFDLMVKKLKMDASSYQFIMKALSESGKLDEVLNVVDTLLDDDGIEFTEELQEFVRGQLR 540

Query: 541 KEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE+REGDLAK+MEEKER+KAEAKA EAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA
Sbjct: 541 KEEREGDLAKLMEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600

Query: 601 E-----------NEMQSGQEDTGKTALPESN 620
           E           N+ Q GQE +G T L ESN
Sbjct: 601 EGSGDAAQAAAVNDTQPGQEASGNTELEESN 631

[Close]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL
Match: A0A5A7UA91 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001470 PE=4 SV=1)

HSP 1 Score: 1002 bits (2591), Expect = 0.0
Identity = 517/623 (82.99%), Postives = 568/623 (91.17%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAP-PVVALRSLSFATPEEAAAERRRRKRRLRIE 60
           MALSKP+F THLKTLTGSHHLL   APAP P+V  R LSFA+ EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQAPAPLPIVTFRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSA RPQSQP + Q+PQNPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPQSQPSRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPS TTYRILIKGLVDN KLERAMELKEEM VKGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKF 300
           P+IYH+LM GC+++SDPDGVFKLFEELKEKLGG VE GVVYG+L+KGYF++ MEEEAMK 
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNV 360
           YE+TVG N  VKMSAIAYNSVLDALCK+GKF EAL LFDRM KEH PPR L +NLG+FNV
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNV 360

Query: 361 IVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKG 420
           +VDGYC +GRF++A+ +FE+MGDYRCSPDTLSFNNLIEQLCNNGMLAEAE LYG+MG+KG
Sbjct: 361 MVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKG 420

Query: 421 VSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEAN 480
           V+PDEFTYGLLM  CF+ NR DDAA YFRKMV+SGLRP++ VYN LV ELVKLGK++EA 
Sbjct: 421 VNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAK 480

Query: 481 SYFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGEL 540
           S+FD+MVKK+KM+AS+Y+FI+KALSESGK+DE+LNVV+TLLDDDGIEF+EELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKEDRE DLAK++EEKER+KAEAKA EAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AENEMQSGQE--DTGKTALPESN 620
             NEMQSGQ+  D GKT L ESN
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESN 623

[Close]

BLAST of Csor.00g305740 vs. TAIR 10
Match: AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 737.6 bits (1903), Expect = 8.0e-213
Identity = 378/611 (61.87%), Postives = 488/611 (79.87%), Query Frame = 0


Query: 1   MALSKPSFLTHLKTLTGSHHLLPHHAPAPPVVALRSLSFATPEEAAAERRRRKRRLRIEP 60
           M++SK +FL HL+TL+ S+    H     P +A+R +SFAT EEAAAERRRRKRRLR+EP
Sbjct: 1   MSISKAAFLNHLQTLSRSYR---HRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEP 60

Query: 61  PLSS-SSATRPQSQPPKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           P++S + + + QSQ P+P   QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAA
Sbjct: 61  PVNSFNRSQQQQSQIPRP--IQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           L+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+APNIIT+NLIFQ Y
Sbjct: 121 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPD 240
           LD RKP+ A+EHYK  I++AP NPS+ T+RIL+KGLV N+ LE+AME+KE+M VKGFV D
Sbjct: 181 LDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVD 240

Query: 241 PIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKF 300
           P++Y +LM+GC+KNSD DGV KL++ELKEKLGG V+ GVVYG L+KGYF++ ME+EAM+ 
Sbjct: 241 PVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMEC 300

Query: 301 YEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNV 360
           YE+ VG NS+V+MSA+AYN VL+AL +NGKFDEAL LFD + KEH+PPR L +NLG+FNV
Sbjct: 301 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 360

Query: 361 IVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKG 420
           +V+GYC  G+F +A+E+F +MGD++CSPDTLSFNNL+ QLC+N +LAEAE LYG M +K 
Sbjct: 361 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 420

Query: 421 VSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKIEEAN 480
           V PDE+TYGLLMD CFK  + D+ A Y++ MVES LRP++ VYNRL D+L+K GK+++A 
Sbjct: 421 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 480

Query: 481 SYFDMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGEL 540
           S+FDMMV K+KM+  +Y+FI++ALSE+G++DE+L +V+ +LDDD +  +EELQEFV+ EL
Sbjct: 481 SFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEEL 540

Query: 541 RKEDREGDLAKVMEEKERVKAEAKAAEAEAAEAQKRSAKAAVSSLLSSK-LFGNKEGEKE 600
           RK  REGDL K+MEEKER+KAEAKA E   AE +K++    +++L+  K +   KE  K 
Sbjct: 541 RKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKL 600

Query: 601 SAENEMQSGQE 610
             ENE    +E
Sbjct: 601 LWENEAGGVEE 606

[Close]

BLAST of Csor.00g305740 vs. TAIR 10
Match: AT1G10270.1 (glutamine-rich protein 23 )

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-82
Identity = 190/541 (35.12%), Postives = 301/541 (55.64%), Query Frame = 0


Query: 24  HHAPAP-PVVALRSLSFATPEEAAAERRRRKRRLRIEPPLSSSSATRPQSQPPKPQSPQN 83
           H  P P P +  R+++F++ EEAAAERRRRKRRLRIEPPL +     P + PPK    ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RD 133

Query: 84  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 143
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 144 AQLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 203
           A  R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 204 NPSLTTYRILIKGLVDNNKLERAMELKEEMTVKGFVPDPIIYHHLMVGCLKNSDPDGVFK 263
            PS  TYR L KGLV   ++  A  L  EM  KG   D  +Y++L+ G L   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 264 LFEELKEKLGGAVEVGVVYGSLIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVL 323
            F+ELK K    V  G+V  + ++ +F +G ++EAM+ Y     ++ + +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 324 DALCKNGKFDEALVLFDRMIKEHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMG 383
           +   K GK DEA  LF+ M+  H+PP  L++N  +  ++V+     G F +A+  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 384 DYRCSP----DTLSFNNLIEQLCNNGMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKG 443
               S     D L + N++ + C  GML EAE  +     + +  D  ++  ++D   K 
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 444 NRPDDAAGYFRKMVESGLRPSMVVYNRLVDELVKLGKI-EEANSYFDMMVKKIKMEASSY 503
            R DDA     +MV+  LR       R+  EL+K GK+ E A     M  ++ K + S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 504 RFIIKALSESGKVDEILNVVNTLLDDDGIEFTEELQEFVRGELRKEDREGDLAKVMEEKE 558
             +++ L +   +D+  ++V  ++  + +  T  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]

BLAST of Csor.00g305740 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 183.7 bits (465), Expect = 4.4e-46
Identity = 107/412 (25.97%), Postives = 198/412 (48.06%), Query Frame = 0


Query: 103 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQ 162
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 163 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLE 222
           +G  P++IT+N++   Y    + + A+     +++    +P + TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNAL----SVLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 223 RAMELKEEMTVKGFVPDPIIYHHLMVGCLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGS 282
           +AME+ + M  +   PD I Y  L+    ++S      KL +E++++  G     V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 283 LIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIK 342
           L+ G    G  +EA+KF       +S  + + I +N +L ++C  G++ +A  L   M++
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 343 EHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNN 402
           +   P  +T     FN++++  C +G    A++I EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSPSVVT-----FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 403 GMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVY 462
             +  A +    M  +G  PD  TY  ++    K  + +DA     ++   G  P ++ Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 463 NRLVDELVKLGKIEEANSYFD-MMVKKIKMEASSYRFIIKALSESGKVDEIL 514
           N ++D L K GK  +A    D M  K +K +  +Y  ++  LS  GKVDE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]

BLAST of Csor.00g305740 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-42
Identity = 110/418 (26.32%), Postives = 199/418 (47.61%), Query Frame = 0


Query: 109 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSDLLSLHRFITQAGVAPN 168
           L  E  + EA       +    +PT+ T+NA++N      K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 169 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILIKGLVDNNKLERAMELK 228
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 229 EEMTVKGFVPDPIIYHHLMVG-CLKNSDPDGVFKLFEELKEKLGGAVEVGVVYGSLIKGY 288
            EM +KGF  D IIY  L+ G C      DG   L + +K K+   V   V + +LI  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV---VAFSALIDCF 331

Query: 289 FIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFDEALVLFDRMIKEHSPP 348
              G   EA + +++   +   +    + Y S++D  CK  + D+A  + D M+ +   P
Sbjct: 332 VKEGKLREAEELHKEM--IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 349 RRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAE 408
                N+ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 409 AEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMVESGLRPSMVVYNRLVD 468
           A++L+  M  + V PD  +Y +L+D       P+ A   F K+ +S +   + +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 469 ELVKLGKIEEANSYF-DMMVKKIKMEASSYRFIIKALSESGKVDEILNVVNTLLDDDG 525
            +    K+++A   F  + +K +K +  +Y  +I  L + G + E  +++   +++DG
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDG 557

[Close]

BLAST of Csor.00g305740 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 3.0e-42
Identity = 115/432 (26.62%), Postives = 209/432 (48.38%), Query Frame = 0


Query: 93  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYSD 152
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 153 LLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSLTTYRILI 212
           +L+L + +   G+A N+ T +++   +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 213 KGLVDNNKLERAMELKEEMTVKGFVPDPIIYHHLMVG-CLKNSDPDGVFKLFEELKEKLG 272
            GL    ++  A+EL + M   G  PD I  + L+ G CL   + + +  L +++ E   
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML-LIDKMVEY-- 226

Query: 273 GAVEVGVVYGSLIKGYFIRGMEEEAMKFYEQTVGVNSEVKMSAIAYNSVLDALCKNGKFD 332
           G     V YG ++      G    AM+   +    N  +K+ A+ Y+ ++D LCK+G  D
Sbjct: 227 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLD 286

Query: 333 EALVLFDRMIKEHSPPRRLTLNLGSFNVIVDGYCTEGRFRDAVEIFEKMGDYRCSPDTLS 392
            A  LF+ M       + +T N+ ++N+++ G+C  GR+ D  ++   M   + +P+ ++
Sbjct: 287 NAFNLFNEM-----EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 346

Query: 393 FNNLIEQLCNNGMLAEAEDLYGSMGDKGVSPDEFTYGLLMDYCFKGNRPDDAAGYFRKMV 452
           F+ LI+     G L EAE+L+  M  +G++PD  TY  L+D   K N  D A      MV
Sbjct: 347 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 406

Query: 453 ESGLRPSMVVYNRLVDELVKLGKIEEANSYF-DMMVKKIKMEASSYRFIIKALSESGKVD 512
             G  P++  +N L++   K  +I++    F  M ++ +  +  +Y  +I+   E GK  
Sbjct: 407 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-- 463

Query: 513 EILNVVNTLLDD 523
             LNV   L  +
Sbjct: 467 --LNVAKELFQE 463

The following BLAST results are available for this feature:

BLAST of Csor.00g305740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3A8	1.1e-211	61.87	Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop...	[more]
Q9SY69	1.9e-81	35.12	Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	6.2e-45	25.97	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q9ASZ8	1.4e-41	26.32	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q0WKV3	4.2e-41	26.62	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]

BLAST of Csor.00g305740 vs. NCBI nr


Match Name	Identity	Description
KAG6574256.1	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023541985.1	97.74	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur...	[more]
XP_022945141.1	97.42	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur...	[more]
XP_023553006.1	88.39	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur...	[more]
KAG6576653.1	88.23	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Csor.00g305740 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1G012	97.42	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like OS=Cuc...	[more]
A0A6J1JB23	88.23	pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit...	[more]
A0A6J1E509	88.23	pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Cucurbit...	[more]
A0A6J1CK90	86.05	pentatricopeptide repeat-containing protein At3g49240 OS=Momordica charantia OX=...	[more]
A0A5A7UA91	82.99	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Csor.00g305740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49240.1	8.0e-213	61.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G10270.1	1.3e-82	35.12	glutamine-rich protein 23	[more]
AT1G09900.1	4.4e-46	25.97	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G12620.1	1.0e-42	26.32	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12300.1	3.0e-42	26.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 541..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 605..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..621
None	No IPR available	PANTHER	PTHR47933:SF12	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..600
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 1..600
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 451..521 e-value: 2.5E-11 score: 45.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 352..450 e-value: 1.0E-27 score: 99.4 coord: 277..351 e-value: 2.2E-13 score: 52.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 99..276 e-value: 1.6E-28 score: 102.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 174..487
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 387..434 e-value: 1.4E-11 score: 44.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 129..179 e-value: 0.0024 score: 17.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 350..380 e-value: 6.8E-7 score: 28.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 356..389 e-value: 4.8E-8 score: 30.7 coord: 391..424 e-value: 1.7E-6 score: 25.8 coord: 207..239 e-value: 2.2E-6 score: 25.5 coord: 316..345 e-value: 5.1E-9 score: 33.8 coord: 425..458 e-value: 2.1E-6 score: 25.6 coord: 460..488 e-value: 8.2E-4 score: 17.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 460..488 e-value: 8.1E-4 score: 19.5 coord: 207..236 e-value: 7.0E-4 score: 19.7 coord: 242..269 e-value: 0.03 score: 14.6 coord: 316..343 e-value: 9.6E-9 score: 34.9 coord: 278..302 e-value: 0.0095 score: 16.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 458..488 score: 8.867749
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 353..387 score: 11.947875
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 388..422 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..238 score: 10.917512
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 423..457 score: 11.542307
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 313..347 score: 12.945353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g305740.m01	Csor.00g305740.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009960	endosperm development
biological_process	GO:0006349	regulation of gene expression by genetic imprinting
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding