Csor.00g305690 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGTAAGTCCTCATTATCTCAATCTTCAACTAATTCTAAAGTAATTGCACCTCTCGATCATTTAGTACATCCTGAAATGCTTAATTGTCATTTTCTTAAACAGTTGTTTCTAATAATGGCAGGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIELNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETREGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLKQVLPWRRKHDE Homology
BLAST of Csor.00g305690 vs. NCBI nr
Match: KAG6574251.1 (hypothetical protein SDJN03_28138, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 390 bits (1003), Expect = 4.21e-137 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Csor.00g305690 vs. NCBI nr
Match: KAG7013320.1 (hypothetical protein SDJN02_26079 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380 bits (976), Expect = 5.52e-133 Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0
BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_023542422.1 (uncharacterized protein LOC111802331 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375 bits (964), Expect = 3.60e-131 Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0
BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_022945009.1 (uncharacterized protein LOC111449373 isoform X2 [Cucurbita moschata]) HSP 1 Score: 365 bits (938), Expect = 3.69e-127 Identity = 184/194 (94.85%), Postives = 184/194 (94.85%), Query Frame = 0
BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_022968166.1 (uncharacterized protein LOC111467482 isoform X2 [Cucurbita maxima]) HSP 1 Score: 350 bits (899), Expect = 2.55e-121 Identity = 176/191 (92.15%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1FZS1 (uncharacterized protein LOC111449373 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449373 PE=4 SV=1) HSP 1 Score: 365 bits (938), Expect = 1.79e-127 Identity = 184/194 (94.85%), Postives = 184/194 (94.85%), Query Frame = 0
BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1HU42 (uncharacterized protein LOC111467482 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467482 PE=4 SV=1) HSP 1 Score: 350 bits (899), Expect = 1.23e-121 Identity = 176/191 (92.15%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1HWG9 (uncharacterized protein LOC111467482 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467482 PE=4 SV=1) HSP 1 Score: 347 bits (891), Expect = 3.35e-120 Identity = 177/204 (86.76%), Postives = 181/204 (88.73%), Query Frame = 0
BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1FZL5 (uncharacterized protein LOC111449373 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449373 PE=4 SV=1) HSP 1 Score: 329 bits (843), Expect = 5.61e-113 Identity = 166/176 (94.32%), Postives = 166/176 (94.32%), Query Frame = 0
BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: E5GBA5 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 269 bits (687), Expect = 1.25e-88 Identity = 148/219 (67.58%), Postives = 158/219 (72.15%), Query Frame = 0
BLAST of Csor.00g305690 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17 Identity = 66/189 (34.92%), Postives = 91/189 (48.15%), Query Frame = 0
BLAST of Csor.00g305690 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13 Identity = 70/223 (31.39%), Postives = 100/223 (44.84%), Query Frame = 0
BLAST of Csor.00g305690 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0
BLAST of Csor.00g305690 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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