Csor.00g305690 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g305690
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMyosin heavy chain
LocationCsor_Chr18: 13029621 .. 13030316 (-)
RNA-Seq ExpressionCsor.00g305690
SyntenyCsor.00g305690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGTAAGTCCTCATTATCTCAATCTTCAACTAATTCTAAAGTAATTGCACCTCTCGATCATTTAGTACATCCTGAAATGCTTAATTGTCATTTTCTTAAACAGTTGTTTCTAATAATGGCAGGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA

mRNA sequence

ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA

Coding sequence (CDS)

ATGAGGACTGCAACAGGGGAAAATCCAAGCTCCACGCCACCAAAGCTGTCTTTGTTTTCTTTTCCAAGACAACCATTGGAGCCGCCAGGGATGGTGACGCCGCCGCTGCACACGTCGATTTCTGTGCCGTTTCACTGGGAAGAGGCACCGGGGAAGCCGAAGCCGCTCGGAATTATTGAATTGAATCCAAAGCCCAAAAGTGCAAGAACTTTGGATCTGCCACCACGGCTGTTCGCCGACACCAAGGTAGCCCATTTTGCCTCTCCGACAATCGCCGCGGATGACCCCGTCGCCGGCCGAGACCTATCGTTCAGGTTCCCGGACAGCTGGGCGGAGACGGCGACGGCGACGGAGACGAGGGAGGGAAAGGATGTTAACAAGGAGAATGTGAAGCGTGGGTCTGAAATTTCACTCTCGGCCGGCGGTGGGGACGACGGCAATACGAGAGTGAAGATCACGAGATTAAGGATTAGAAGAAACTTTATCGGGACATGGAATTCAAAGTCGCACATCATCGCATGTATTTATGGGAGCTTGAAGCAAGTGCTTCCATGGAGACGCAAGCATGATGAATGA

Protein sequence

MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIELNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETREGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLKQVLPWRRKHDE
Homology
BLAST of Csor.00g305690 vs. NCBI nr
Match: KAG6574251.1 (hypothetical protein SDJN03_28138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390 bits (1003), Expect = 4.21e-137
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR
Sbjct: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180
           EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK
Sbjct: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180

Query: 181 QVLPWRRKHDE 191
           QVLPWRRKHDE
Sbjct: 181 QVLPWRRKHDE 191

BLAST of Csor.00g305690 vs. NCBI nr
Match: KAG7013320.1 (hypothetical protein SDJN02_26079 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380 bits (976), Expect = 5.52e-133
Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLH SISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHASISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDS AETATATETR
Sbjct: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSCAETATATETR 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180
           EGKDVNKENVKRGSEISLSAGG DDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK
Sbjct: 121 EGKDVNKENVKRGSEISLSAGGVDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180

Query: 181 QVLPWRRKHDE 191
           QVLPWRRKHDE
Sbjct: 181 QVLPWRRKHDE 191

BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_023542422.1 (uncharacterized protein LOC111802331 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375 bits (964), Expect = 3.60e-131
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLH SISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHASISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFAD KVAHFASPTIAAD+PVAGRDLSFRFPDSWAETATATETR
Sbjct: 61  LNPKPKSARTLDLPPRLFADAKVAHFASPTIAADEPVAGRDLSFRFPDSWAETATATETR 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180
           EGKDVNKENVKRGSEISLSAGG DDGNTRVKITRLRIRRNFIGTWNSKSHI ACIYGSLK
Sbjct: 121 EGKDVNKENVKRGSEISLSAGGVDDGNTRVKITRLRIRRNFIGTWNSKSHI-ACIYGSLK 180

Query: 181 QVLPWRRKHDE 191
           QVLPWRRKHDE
Sbjct: 181 QVLPWRRKHDE 190

BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_022945009.1 (uncharacterized protein LOC111449373 isoform X2 [Cucurbita moschata])

HSP 1 Score: 365 bits (938), Expect = 3.69e-127
Identity = 184/194 (94.85%), Postives = 184/194 (94.85%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGM TPPLH SISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMATPPLHASISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD---LSFRFPDSWAETATAT 120
           LNPKPKSARTLDLP RLFAD KVAHFASPTIAADDPVAGRD   LSFRFPDSWAETATAT
Sbjct: 61  LNPKPKSARTLDLPLRLFADAKVAHFASPTIAADDPVAGRDRRDLSFRFPDSWAETATAT 120

Query: 121 ETREGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYG 180
           ETREGKDVNKENVKRG EISLSAGG DDGNTRVKITRLRIRRNFIGTWNSKSHI ACIYG
Sbjct: 121 ETREGKDVNKENVKRGPEISLSAGGADDGNTRVKITRLRIRRNFIGTWNSKSHI-ACIYG 180

Query: 181 SLKQVLPWRRKHDE 191
           SLKQVLPWRRKHDE
Sbjct: 181 SLKQVLPWRRKHDE 193

BLAST of Csor.00g305690 vs. NCBI nr
Match: XP_022968166.1 (uncharacterized protein LOC111467482 isoform X2 [Cucurbita maxima])

HSP 1 Score: 350 bits (899), Expect = 2.55e-121
Identity = 176/191 (92.15%), Postives = 180/191 (94.24%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENP STPPKLSLFSFPRQPLEPPGMVTPPLH SISVPFHWEEAPGKPKPLG+IE
Sbjct: 1   MRTATGENPISTPPKLSLFSFPRQPLEPPGMVTPPLHESISVPFHWEEAPGKPKPLGVIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD SFRFPDSWAETAT    R
Sbjct: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDPSFRFPDSWAETAT----R 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180
           EGKDVNKENVKRGSEISL AGG DDGNTRVKITRLRIRRNF+GT NSKSHI AC++GSLK
Sbjct: 121 EGKDVNKENVKRGSEISLLAGGADDGNTRVKITRLRIRRNFLGTSNSKSHI-ACVHGSLK 180

Query: 181 QVLPWRRKHDE 191
           QVLPWRRKHDE
Sbjct: 181 QVLPWRRKHDE 186

BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1FZS1 (uncharacterized protein LOC111449373 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449373 PE=4 SV=1)

HSP 1 Score: 365 bits (938), Expect = 1.79e-127
Identity = 184/194 (94.85%), Postives = 184/194 (94.85%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGM TPPLH SISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMATPPLHASISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD---LSFRFPDSWAETATAT 120
           LNPKPKSARTLDLP RLFAD KVAHFASPTIAADDPVAGRD   LSFRFPDSWAETATAT
Sbjct: 61  LNPKPKSARTLDLPLRLFADAKVAHFASPTIAADDPVAGRDRRDLSFRFPDSWAETATAT 120

Query: 121 ETREGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYG 180
           ETREGKDVNKENVKRG EISLSAGG DDGNTRVKITRLRIRRNFIGTWNSKSHI ACIYG
Sbjct: 121 ETREGKDVNKENVKRGPEISLSAGGADDGNTRVKITRLRIRRNFIGTWNSKSHI-ACIYG 180

Query: 181 SLKQVLPWRRKHDE 191
           SLKQVLPWRRKHDE
Sbjct: 181 SLKQVLPWRRKHDE 193

BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1HU42 (uncharacterized protein LOC111467482 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467482 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 1.23e-121
Identity = 176/191 (92.15%), Postives = 180/191 (94.24%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENP STPPKLSLFSFPRQPLEPPGMVTPPLH SISVPFHWEEAPGKPKPLG+IE
Sbjct: 1   MRTATGENPISTPPKLSLFSFPRQPLEPPGMVTPPLHESISVPFHWEEAPGKPKPLGVIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD SFRFPDSWAETAT    R
Sbjct: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDPSFRFPDSWAETAT----R 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLK 180
           EGKDVNKENVKRGSEISL AGG DDGNTRVKITRLRIRRNF+GT NSKSHI AC++GSLK
Sbjct: 121 EGKDVNKENVKRGSEISLLAGGADDGNTRVKITRLRIRRNFLGTSNSKSHI-ACVHGSLK 180

Query: 181 QVLPWRRKHDE 191
           QVLPWRRKHDE
Sbjct: 181 QVLPWRRKHDE 186

BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1HWG9 (uncharacterized protein LOC111467482 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467482 PE=4 SV=1)

HSP 1 Score: 347 bits (891), Expect = 3.35e-120
Identity = 177/204 (86.76%), Postives = 181/204 (88.73%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENP STPPKLSLFSFPRQPLEPPGMVTPPLH SISVPFHWEEAPGKPKPLG+IE
Sbjct: 1   MRTATGENPISTPPKLSLFSFPRQPLEPPGMVTPPLHESISVPFHWEEAPGKPKPLGVIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETR 120
           LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD SFRFPDSWAETAT    R
Sbjct: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDPSFRFPDSWAETAT----R 120

Query: 121 EGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIA------- 180
           EGKDVNKENVKRGSEISL AGG DDGNTRVKITRLRIRRNF+GT NSKSHIIA       
Sbjct: 121 EGKDVNKENVKRGSEISLLAGGADDGNTRVKITRLRIRRNFLGTSNSKSHIIASPHYLNL 180

Query: 181 ------CIYGSLKQVLPWRRKHDE 191
                 C++GSLKQVLPWRRKHDE
Sbjct: 181 PTISKACVHGSLKQVLPWRRKHDE 200

BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: A0A6J1FZL5 (uncharacterized protein LOC111449373 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449373 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 5.61e-113
Identity = 166/176 (94.32%), Postives = 166/176 (94.32%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MRTATGENPSSTPPKLSLFSFPRQPLEPPGM TPPLH SISVPFHWEEAPGKPKPLGIIE
Sbjct: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMATPPLHASISVPFHWEEAPGKPKPLGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRD---LSFRFPDSWAETATAT 120
           LNPKPKSARTLDLP RLFAD KVAHFASPTIAADDPVAGRD   LSFRFPDSWAETATAT
Sbjct: 61  LNPKPKSARTLDLPLRLFADAKVAHFASPTIAADDPVAGRDRRDLSFRFPDSWAETATAT 120

Query: 121 ETREGKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIA 173
           ETREGKDVNKENVKRG EISLSAGG DDGNTRVKITRLRIRRNFIGTWNSKSHII 
Sbjct: 121 ETREGKDVNKENVKRGPEISLSAGGADDGNTRVKITRLRIRRNFIGTWNSKSHIIV 176

BLAST of Csor.00g305690 vs. ExPASy TrEMBL
Match: E5GBA5 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 1.25e-88
Identity = 148/219 (67.58%), Postives = 158/219 (72.15%), Query Frame = 0

Query: 1   MRTATGENPSSTPPKLSLFSFPRQPLEPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIE 60
           MR  TGENPSSTPPKLSLFS PRQP EPPGMVTPPLH SISVPF WEEAPGKP+P GIIE
Sbjct: 1   MRFVTGENPSSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIE 60

Query: 61  LNPKPKSARTLDLPPRLFADTKVAHFASPTIAADDPVAGRDLS----FRFPDSWAET--- 120
            N KPKSAR+LDLPPRLFAD KVAHFASPT A D+P+ GRDLS    FRFPD+WAET   
Sbjct: 61  PNSKPKSARSLDLPPRLFADAKVAHFASPTTAVDEPIFGRDLSSSLSFRFPDTWAETVRA 120

Query: 121 ---ATATETREGKD-------------VNKENVKRGSEISLSAGG-----GDDGNTRVKI 180
              ATAT TREGKD              NKE  K GSEI+++ GG       DG TRVKI
Sbjct: 121 TATATATGTREGKDGKYVGSRRWMSFRKNKEIPKSGSEIAVTGGGDRNVGSSDGETRVKI 180

Query: 181 TRLRIRRNFIGTWNSKSHIIACIYGSLKQVLPWRRKHDE 191
           TR R RR+F    NSKSH IA IYGSLKQ + WRRK DE
Sbjct: 181 TRFRSRRSFFRKPNSKSHFIANIYGSLKQAISWRRKGDE 219

BLAST of Csor.00g305690 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 66/189 (34.92%), Postives = 91/189 (48.15%), Query Frame = 0

Query: 14  PKLSLFSFP-RQPLEPPGMVTPPLHTSISVPFHWEEAPGKP------KPLGIIELNPKPK 73
           PKL LFS P  +  + PG+ TPP++ + SVPF WEEAPGKP      KPL   +   +  
Sbjct: 15  PKLPLFSIPFNRACDTPGLATPPVNIAGSVPFLWEEAPGKPRVSDENKPLASKQNEREGG 74

Query: 74  S---ARTLDLPPRLF--ADTKVAHFASPTIAADDPVAGRDLSFRFPDSWAETATATETRE 133
                R L+LPPRLF  AD +     SPT   D P           D    + +     E
Sbjct: 75  GGGVVRCLELPPRLFFPADDE----PSPTTVLDGPY----------DVPRRSLSVIRRSE 134

Query: 134 GKDVNKENVKRGSEISLSAGGGDDGNTRVKITRLRIRRNFIGTWNSKSHIIACIYGSLKQ 191
                +    R +      GG   G T VKI+R+R + + +   +SKS  +A +Y   KQ
Sbjct: 135 RASEGRFEFSRSTNSRCCDGG---GGTTVKISRVRRKGSLLNLSHSKSQFLARVYQGFKQ 186

BLAST of Csor.00g305690 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 70/223 (31.39%), Postives = 100/223 (44.84%), Query Frame = 0

Query: 10  SSTPPKLSLFSFPRQPL---EPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIELNPKPK 69
           SST  +L LFS+P   +     PG+ TPP++ + SVPF WEEAPGKP+ +       +  
Sbjct: 13  SSTRKQLPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKG 72

Query: 70  SARTLDLPPRLF--ADTKVAHFASPTIAADDPVAGRDLSFRFPDSWA------------- 129
             R+L+LPPRL    ++   +  SPT   D P   R  S   P S A             
Sbjct: 73  VVRSLELPPRLVLPGESTTVNEPSPTTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAP 132

Query: 130 ---ETATATETREGKDVNKENVKRG-SEISLS-----------AGGGDDGN----TRVKI 189
              E      +R G   N + V  G  + S             AGGG  GN     +VK+
Sbjct: 133 EKEERLVGGSSRWGSFGNCKEVSEGIFDFSRFRDDGYDCRRDWAGGGGVGNFAGDAKVKL 192

Query: 190 TRLRIRRNFIG-TWNSKS----HIIACIYGSLKQVLPWRRKHD 191
            R+  + +F   +  +KS     + A +Y   KQV+PW+RK +
Sbjct: 193 YRIIKKGSFFNLSHTTKSDFWLKMQARVYEGFKQVIPWKRKQE 235

BLAST of Csor.00g305690 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0

Query: 10  SSTPPKLSLFSFPRQPL---EPPGMVTPPLHTSISVPFHWEEAPGKPKPLGIIELNPKPK 69
           SST  +L LFS+P   +     PG+ TPP++ + SVPF WEEAPGKP+ +       +  
Sbjct: 13  SSTRKQLPLFSYPMNNIAYETTPGLATPPVNIAGSVPFLWEEAPGKPRRVKKPARLNQKG 72

Query: 70  SARTLDLPPRLF--ADTKVAHFASPTIAADDPVAGRDLSFRFPDSWA 112
             R+L+LPPRL    ++   +  SPT   D P   R  S   P S A
Sbjct: 73  VVRSLELPPRLVLPGESTTVNEPSPTTVLDGPYDLRRRSLSLPRSAA 119

BLAST of Csor.00g305690 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0

Query: 29 PGMVTPPLHTSISVPFHWEEAPGKPK-PLGIIELNPKPKS-ARTLDLPPRL 78
          P +   P+HT  SVPF WE+ PGKPK PL       +P S  + LDLPPRL
Sbjct: 32 PRVFASPIHTLASVPFCWEDQPGKPKHPL-------RPLSYPKCLDLPPRL 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6574251.14.21e-137100.00hypothetical protein SDJN03_28138, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013320.15.52e-13398.43hypothetical protein SDJN02_26079 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023542422.13.60e-13197.38uncharacterized protein LOC111802331 [Cucurbita pepo subsp. pepo][more]
XP_022945009.13.69e-12794.85uncharacterized protein LOC111449373 isoform X2 [Cucurbita moschata][more]
XP_022968166.12.55e-12192.15uncharacterized protein LOC111467482 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1FZS11.79e-12794.85uncharacterized protein LOC111449373 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HU421.23e-12192.15uncharacterized protein LOC111467482 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HWG93.35e-12086.76uncharacterized protein LOC111467482 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FZL55.61e-11394.32uncharacterized protein LOC111449373 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
E5GBA51.25e-8867.58Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G27810.11.3e-1734.92unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G53030.13.4e-1331.39unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT5G53030.22.7e-1039.25unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
AT2G46535.11.7e-0450.98unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 ... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007789Protein of unknown function DUF688PFAMPF05097DUF688coord: 39..113
e-value: 1.6E-4
score: 21.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availablePANTHERPTHR34371OS01G0551000 PROTEINcoord: 7..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g305690.m01Csor.00g305690.m01mRNA