Csor.00g305610 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g305610
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionthylakoid lumenal 17.4 kDa protein, chloroplastic
LocationCsor_Chr18: 13003081 .. 13005028 (+)
RNA-Seq ExpressionCsor.00g305610
SyntenyCsor.00g305610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCCTATCACTTGCCGTGGTTAGTTCTTCTTCGACCTCTTCTTTGTTTCTTTCAACTCCCTTTAGTTTTATGCATTGATTTACTTCAACAATTGCTCCACATCGTACCCTTTTTGTGGGTAAATTGCATTAGAATCTGGGGAGAACTGTTTTCTTTCTCCCGGTCTCTGCCCTTTGCTGCATATTATGTTGTTAGGATCAGGATGCTGGTTGTGGGTAAATGCATTGAGTGATCTCTAAATTGGTAAAAATTCTGATGTGCTTGGGCGAATGCAATTTGAGCTCAACCCCATCGTGTGTATTCAATCGTTATGACTTATGTTTAATGGAGCCTTATCTGCAATGCCATTTTATTAACTGATGAAACAAGTGTCCGTGTGGTTCAATTGCAGCCGCTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGTAGCTTGTGGTCTTCTTGCTGTTTGGACTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGGTCAATAGCCTATCACGTTTCTTCATCCACATGGCTTGAGGCAATTAACAATTAATACCCACATCTGTGACATTCTTCACTTTCAGGCGTTTCATTAGATGATCAATTTGGAGTTTATGCATTTTCTGCTGATTTATAGTTTATACGTTTGAGTTTTGTGTATTAGAAGTGTGTATTTGGAGTGTATTTACATGACCTTTTAGAATAATGAAATGCTATTCAAATTTATCTGATGTTTGGGTACGTGAGATAAAAATTCCCAGGCGCCATTCCAAACCCACGAACTTGCATCTAAACTTAGGCTAAAACCCAGTTTTTCTTTTCCAAGGACATTTTGTAATAATCTTGTGAGATCCCATATCGGTTGGGGAGGGGAACGAAACATTCTTTATAAGAATGTAGAACCTTTTAAAACCTTGAGAGTAACCGTGGAAGGAAAAGCCCTAAGAAGACAATATCTGGTAACGGCGGACTTAGATTGTTACAAATGGTATCGATTGGAGAGGGAAATGAAACATTCTTTTTAAGAGTGTGGAAACATCTTCTTTTTTTATGTTCTTCCTTTTATATGTTCTTCCTTTTATAGTCATGATCAACAAAATTCGTTCACTTTGTGTGGCAAGTGTGAAACAACTCATTATATTTAACCTCGAGAAATAAACCTGTTGAACTCATAATATGATATGTGGGACTTGCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGCGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCCTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTAAAATTCTCTCTTTCTTACCCCAACTCCAATAGCCAGGCGGATTGTGGACAAAGGAGAAAGACTTTGATTGGATCTCCCAACTCTAAAATCATGTATTTGCCTACAAATATTAATACTCATAACACGGGTTCAAACGTCATGATAACATTGCATATTGCAGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

mRNA sequence

ATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCCTATCACTTGCCGTGCCGCTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGTAGCTTGTGGTCTTCTTGCTGTTTGGACTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGCGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCCTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Coding sequence (CDS)

ATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCCTATCACTTGCCGTGCCGCTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGTAGCTTGTGGTCTTCTTGCTGTTTGGACTTTGACAAATACCACTCCTGTGATTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGCGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCCTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Homology
BLAST of Csor.00g305610 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-79
Identity = 152/240 (63.33%), Postives = 188/240 (78.33%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHI 60
           MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

BLAST of Csor.00g305610 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0

Query: 76  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

BLAST of Csor.00g305610 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-07
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 0

Query: 129 GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 188
           GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 189 GALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 238
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

BLAST of Csor.00g305610 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.2e-05
Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 0

Query: 126 QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 185
           Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 186 LFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 224
             + T L+G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

BLAST of Csor.00g305610 vs. ExPASy Swiss-Prot
Match: Q8Z4G9 (Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.8e-04
Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 0

Query: 127 LKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAL 186
           L G +L A  + +A   GADL   ++  A   GA+FKG + S A L     G +NL  A 
Sbjct: 159 LTGANLTAENLCDADLSGADLEGAILFMADCDGANFKGANLSGASL-----GDSNLTNAC 218

Query: 187 FKNTVLSGSTFDDAQLQDAVFEDT 211
            +++++ G+T D A L  A  + T
Sbjct: 219 LEDSIMCGATLDRANLTGANLQHT 237

BLAST of Csor.00g305610 vs. NCBI nr
Match: KAG6574243.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469 bits (1206), Expect = 1.60e-166
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. NCBI nr
Match: XP_022945269.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 468 bits (1203), Expect = 4.60e-166
Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. NCBI nr
Match: XP_023541447.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455 bits (1170), Expect = 4.94e-161
Identity = 231/237 (97.47%), Postives = 231/237 (97.47%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLA ITC A VDGAEPKESLSPCKHIGT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. NCBI nr
Match: XP_022968163.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 447 bits (1151), Expect = 3.89e-158
Identity = 226/237 (95.36%), Postives = 228/237 (96.20%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 425 bits (1093), Expect = 2.70e-149
Identity = 213/237 (89.87%), Postives = 222/237 (93.67%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA LSIP SQNGFSRSF+S KRPQ++ P   SL  ITC A  DGA+P+E+LSPCKHI TV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 2.23e-166
Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 447 bits (1151), Expect = 1.89e-158
Identity = 226/237 (95.36%), Postives = 228/237 (96.20%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 1.31e-149
Identity = 213/237 (89.87%), Postives = 222/237 (93.67%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA LSIP SQNGFSRSF+S KRPQ++ P   SL  ITC A  DGA+P+E+LSPCKHI TV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

BLAST of Csor.00g305610 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 424 bits (1091), Expect = 1.11e-148
Identity = 213/237 (89.87%), Postives = 221/237 (93.25%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA LSIP SQNGFSR F+SAK P +I+P + SLA I+C A  DGAEP+ESLSPC HIG+V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNT+P  AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

BLAST of Csor.00g305610 vs. ExPASy TrEMBL
Match: A0A6J1E548 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430851 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 1.49e-147
Identity = 211/237 (89.03%), Postives = 220/237 (92.83%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60
           MA LSIP SQNGFSR F+SAK P + +P + SLAPI+C A  DGA P+ESLSPC HIG+V
Sbjct: 45  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRDGAVPRESLSPCNHIGSV 104

Query: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNT+P  AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 105 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 164

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 165 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 224

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237
           NLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 225 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 281

BLAST of Csor.00g305610 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.7 bits (761), Expect = 8.0e-81
Identity = 152/240 (63.33%), Postives = 188/240 (78.33%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHI 60
           MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

BLAST of Csor.00g305610 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-80
Identity = 151/239 (63.18%), Postives = 187/239 (78.24%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRA--AVDGAEPKESLSPCKHIG 60
           MA+L +  ++N  S  F+S      +     SL  + C      +G   K+SL P K +G
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSGENRENGEGVKKSLFPLKELG 60

Query: 61  TVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 120
           ++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFC
Sbjct: 61  SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 120

Query: 121 DYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 180
           DYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFG
Sbjct: 121 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 180

Query: 181 KANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           K+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 235

BLAST of Csor.00g305610 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 294.3 bits (752), Expect = 8.9e-80
Identity = 153/254 (60.24%), Postives = 189/254 (74.41%), Query Frame = 0

Query: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAV-----------------D 60
           MA+L +  ++N  S  F+S      +     SL  + C A V                 +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIG 120
           G   K+SL P K +G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 238
           GV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N
Sbjct: 181 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 240

BLAST of Csor.00g305610 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0

Query: 76  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

BLAST of Csor.00g305610 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0

Query: 76  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 124

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P817601.1e-7963.33Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Q8H1Q16.5e-1130.12Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
B1WVN55.7e-0729.41Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ... [more]
P742219.2e-0531.63Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
Q8Z4G97.8e-0434.52Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
KAG6574243.11.60e-166100.00Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
XP_022945269.14.60e-16699.58thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata][more]
XP_023541447.14.94e-16197.47thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe... [more]
XP_022968163.13.89e-15895.36thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima][more]
XP_008455988.12.70e-14989.87PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1G0I92.23e-16699.58thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1HX781.89e-15895.36thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36... [more]
A0A1S3C2V71.31e-14989.87thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1JAQ71.11e-14889.87thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36... [more]
A0A6J1E5481.49e-14789.03thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=... [more]
Match NameE-valueIdentityDescription
AT5G53490.18.0e-8163.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G53490.22.3e-8063.18Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G53490.38.9e-8060.24Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12250.14.7e-1230.12Pentapeptide repeat-containing protein [more]
AT1G12250.24.7e-1230.12Pentapeptide repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 113..237
e-value: 5.3E-22
score: 79.4
NoneNo IPR availablePANTHERPTHR47485:SF1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 1..237
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 115..219
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 160..218
e-value: 2.8E-8
score: 33.9
IPR044195Pentapeptide repeat containing protein TL17-likePANTHERPTHR47485THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g305610.m01Csor.00g305610.m01mRNA