Csor.00g305370 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g305370
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr18: 12846210 .. 12846609 (+)
RNA-Seq ExpressionCsor.00g305370
SyntenyCsor.00g305370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGTGAGGTTCCTTGTTTTAGCTTTATGCGTATTGGGTTTAATGTAATTTAGGTATTCGAAATGAAACCAAACTGTTTGAACTTGTTTGTTTCTGGGGGTTGAGATTTTGAATTTGTGTTGTTTGGTGATTATGGAAAGTCAACTTGTAGACCTAATTTTGCAGGTATGGACCAGAATTGCACGTAA

mRNA sequence

ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAA

Coding sequence (CDS)

ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAA

Protein sequence

MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSSVSIGLVGILKGMDQNCT
Homology
[Close]
BLAST of Csor.00g305370 vs. NCBI nr
Match: KAG6574219.1 (hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164 bits (416), Expect = 2.99e-51
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60
          MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS
Sbjct: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60

Query: 61 VSIGLVGILKGMDQNCT 77
          VSIGLVGILKGMDQNCT
Sbjct: 61 VSIGLVGILKGMDQNCT 77

[Close]
BLAST of Csor.00g305370 vs. NCBI nr
Match: KAG7013288.1 (putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145 bits (367), Expect = 1.24e-38
Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60
          MII+PSEIPTPSLPQPRTYGAFSNCFPSG HTFLSFQFNSPVFPPFPCELGRSEYCNQSS
Sbjct: 1  MIIRPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60

Query: 61 VSIGLVGILKGM 72
          VSIGLVGILK +
Sbjct: 61 VSIGLVGILKAI 72

The following BLAST results are available for this feature:
BLAST of Csor.00g305370 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g305370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574219.12.99e-51100.00hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013288.11.24e-3894.44putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Csor.00g305370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g305370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g305370.m01Csor.00g305370.m01mRNA