Csor.00g305300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGACCAACCGCCGCCGCCGCCGCCGCCGAGAAGTTATACATTAACAACGTCATCAATAACCTACGCAAAATCGACCACCGCCACCACGGCCTCGCCGTACAATTGGTTCAAATCCTGCACGCCGCCGAACCCACCTACATTCTCCGAGACATCTCATTCACAGCGCATCCTTCTCAAATTCTCGCCATTGTCGGCCCAAGCGGCGCCGGAAAATCCACTCTTCTTGATATCCTCGCCGCTCGAACCACCCCGACTCATGGAGCCGTTCTTCTCAACTCCTCCACTCTGA ATGGAAGAAGACCAACCGCCGCCGCCGCCGCCGCCGAGAAGTTATACATTAACAACGTCATCAATAACCTACGCAAAATCGACCACCGCCACCACGGCCTCGCCGTACAATTGGTTCAAATCCTGCACGCCGCCGAACCCACCTACATTCTCCGAGACATCTCATTCACAGCGCATCCTTCTCAAATTCTCGCCATTGTCGGCCCAAGCGGCGCCGGAAAATCCACTCTTCTTGATATCCTCGCCGCTCGAACCACCCCGACTCATGGAGCCGTTCTTCTCAACTCCTCCACTCTGA ATGGAAGAAGACCAACCGCCGCCGCCGCCGCCGCCGAGAAGTTATACATTAACAACGTCATCAATAACCTACGCAAAATCGACCACCGCCACCACGGCCTCGCCGTACAATTGGTTCAAATCCTGCACGCCGCCGAACCCACCTACATTCTCCGAGACATCTCATTCACAGCGCATCCTTCTCAAATTCTCGCCATTGTCGGCCCAAGCGGCGCCGGAAAATCCACTCTTCTTGATATCCTCGCCGCTCGAACCACCCCGACTCATGGAGCCGTTCTTCTCAACTCCTCCACTCTGA MEEDQPPPPPPPRSYTLTTSSITYAKSTTATTASPYNWFKSCTPPNPPTFSETSHSQRILLKFSPLSAQAAPENPLFLISSPLEPPRLMEPFFSTPPL Homology
BLAST of Csor.00g305300 vs. NCBI nr
Match: KAG6574212.1 (hypothetical protein SDJN03_28099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194 bits (492), Expect = 3.43e-62 Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
BLAST of Csor.00g305300 vs. NCBI nr
Match: XP_023541336.1 (ABC transporter G family member 8-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541337.1 ABC transporter G family member 8-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 80.5 bits (197), Expect = 4.17e-15 Identity = 47/72 (65.28%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Csor.00g305300 vs. NCBI nr
Match: XP_022945799.1 (LOW QUALITY PROTEIN: ABC transporter G family member 4-like [Cucurbita moschata]) HSP 1 Score: 75.1 bits (183), Expect = 3.26e-13 Identity = 46/72 (63.89%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Csor.00g305300 vs. NCBI nr
Match: XP_023551807.1 (ABC transporter G family member 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.0 bits (175), Expect = 3.94e-12 Identity = 50/102 (49.02%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of Csor.00g305300 vs. NCBI nr
Match: XP_022141332.1 (ABC transporter G family member 8 [Momordica charantia]) HSP 1 Score: 68.2 bits (165), Expect = 8.89e-11 Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 0
BLAST of Csor.00g305300 vs. ExPASy TrEMBL
Match: A0A6J1G1Y8 (LOW QUALITY PROTEIN: ABC transporter G family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC111449939 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.58e-13 Identity = 46/72 (63.89%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Csor.00g305300 vs. ExPASy TrEMBL
Match: A0A6J1CJK6 (ABC transporter G family member 8 OS=Momordica charantia OX=3673 GN=LOC111011751 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.30e-11 Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 0
BLAST of Csor.00g305300 vs. ExPASy TrEMBL
Match: A0A6J1E550 (ABC transporter G family member 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430824 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.87e-11 Identity = 49/105 (46.67%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Csor.00g305300 vs. ExPASy TrEMBL
Match: A0A6J1J853 (ABC transporter G family member 8-like OS=Cucurbita maxima OX=3661 GN=LOC111482617 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.87e-11 Identity = 49/105 (46.67%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Csor.00g305300 vs. ExPASy TrEMBL
Match: A0A0A0L9Y5 (White-brown-complex ABC transporter family OS=Cucumis sativus OX=3659 GN=Csa_3G184580 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.33e-09 Identity = 53/114 (46.49%), Postives = 61/114 (53.51%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|