Csor.00g305260 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g305260
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
Location	Csor_Chr18: 12792708 .. 12794689 (+)
RNA-Seq Expression	Csor.00g305260
Synteny	Csor.00g305260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCGAGTGATCGGACGGCCATTATTGGCCAAGGTGAAGCAGACGACGGGGATCGTCGGTCTGGATGTTGTCCCAAACGCCCGAGAGGTCTTGATCGGCCTTTACGGTAAAACCCTACAGGAGATCCAGGCCGTTCCCGAGGACGAAGGATACCGCAAGGCAGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAGGAGGACTGGGAGCAAATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTCATTGAGGAAGCTCAGGACGAGCTCAAGCTCATTGCTAAAATGATCGGTATGTATATAATTTTCTGCAAGCAAAGTTCAATTTTTTACATATTTGTGAAATTTTGATGACAGTCTATTTCCGTTTCATTTCCTTGTCCTATCTGTTTCGTTATGGGAAGGGAATGTATGAATTGGGGATGGAAAATGGCAGGATTTTCGAGTTATGTGATATTTCTATAATTGCATTGCGTGGAAATGATGGAAACCGAACCTTTCGTACTCAAATTATGAGTTTGGCATCGGTAATGAGACCTTGCAGGCATGTTTTAAATACAAAAGATCCCTATATAAGAGAAAGATTATGGGTATATGAAATCTTTTTGGGTAGACGAAAAGCAAAGTTGTTGTTAGTATTTATGTTCAAAGTGGACGATATCATGTCATTGTGGAGATAGATAGAGGTCGTATGATCCCAAATAGCTGGTATTAGAGTCATGTCCCGAACTTAGCCGTGTTAGTAAAATCCTTGAGTTCCAAATGTAAATGTAGTTAGTCATGAATCCGTGGTTGAGCTTTTGGATAGGTAGTGTGTGCTGTGAGGAGTAAACCTAATTAAAAAGTAATATGTAAAAGTGTAGTTTGAAGGTACGACTATGTGAGGGTAGACTCGAGATGATACTTTGTGCTAGAGGAGGATTGTTTGCGTTAACTAGATAAGAATAAATCCTATAACCGGAGGATTGTTGGCACTGCCTAGATAAGAAAAAAATCATGGGTTATATGAGTGTGAACAATCGTCTCCATTGGAATAAGACTTTTTTAGAGAAAGCAAAAGCAAAATCACGAGTGTTTATGCTCGAAGTGGACAATAACATATCATTACAGGGAAGATCATTGAAAATACAAACAAAGTCCCACATTGACCTTATAAAGAAAAAGTCATAGGTAGATGAGTGAGGACAACCTTCTCCAATAAAAATGAGGCCTTTGAGAGAAAATCAAAACAAAGCCACGAAGGTTTATGCCGAAAGTGAAGATTATCATACTATTGTGGAGATAGGTCGTTGAATGTCAAATAATGGCATTTGAATCTTGTTGTACTGACAAAGCTGTGTTAACACCTATGAATTAGACTGTACATATCCTTTTGTCATTGCTAGCTTCTGGCCTAATAGCAATCCCTGATTTCTGTTATAACCTGAGGATTGTGAAAATTGCATGTGTGAAGCAATATGCCCGACTTCTCTGGTCTTAGCTGCATTGGCGCACATTCATTATTTCATAGACGGAGCCAATATTTTAAATGTCGATGTTCACGAAAACGTCAAGATCTCAATTTTATGAAAAGTTCAATGAAAATACCGAGAAAATGCGAGCTTCCCCTTTGCTCTATAGAAATGGATGGAAATGCCTACTACTCATTCCCATTCAATAGGTTCACAGTCGGGCTGAAAACCAGTGTCGATGAATATTTATTTAGAACCGGTCATCACAATCTGTTTGTAGTTTTTTTAGTCACAAGTTACTTGAAATATGCAGAGTGGGATCCGTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATAGAGAACGATGCGCCAGTACCGAAGCATGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAGGAGTTTTACAAAACGCTGGAGGCCATTAGCAGTGGTGGTAGTGCACAGAAAGTAGAGACGACCGACAAAGCGTCTCAGGTGACAGAATGA

mRNA sequence

ATGTTTCTGCGAGTGATCGGACGGCCATTATTGGCCAAGGTGAAGCAGACGACGGGGATCGTCGGTCTGGATGTTGTCCCAAACGCCCGAGAGGTCTTGATCGGCCTTTACGGTAAAACCCTACAGGAGATCCAGGCCGTTCCCGAGGACGAAGGATACCGCAAGGCAGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAGGAGGACTGGGAGCAAATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTCATTGAGGAAGCTCAGGACGAGCTCAAGCTCATTGCTAAAATGATCGAGTGGGATCCGTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATAGAGAACGATGCGCCAGTACCGAAGCATGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAGGAGTTTTACAAAACGCTGGAGGCCATTAGCAGTGGTGGTAGTGCACAGAAAGTAGAGACGACCGACAAAGCGTCTCAGGTGACAGAATGA

Coding sequence (CDS)

ATGTTTCTGCGAGTGATCGGACGGCCATTATTGGCCAAGGTGAAGCAGACGACGGGGATCGTCGGTCTGGATGTTGTCCCAAACGCCCGAGAGGTCTTGATCGGCCTTTACGGTAAAACCCTACAGGAGATCCAGGCCGTTCCCGAGGACGAAGGATACCGCAAGGCAGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAGGAGGACTGGGAGCAAATCGAGAAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTCATTGAGGAAGCTCAGGACGAGCTCAAGCTCATTGCTAAAATGATCGAGTGGGATCCGTGGGGTGTTCCTGATGACTACGAATGTGAAGTGATAGAGAACGATGCGCCAGTACCGAAGCATGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAGGAGTTTTACAAAACGCTGGAGGCCATTAGCAGTGGTGGTAGTGCACAGAAAGTAGAGACGACCGACAAAGCGTCTCAGGTGACAGAATGA

Protein sequence

MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE

Homology

[Close]

BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot
Match: Q9FLX7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.6e-73
Identity = 135/169 (79.88%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAR VLI LY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 170
           ENDAP+PKHVP HRPGPLPE+FYKTLE + +    +    T    Q+ E
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAATPSDPQLKE 169

[Close]

BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot
Match: Q559Z4 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=ndufa5 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.7e-17
Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K++TGI GL V PNAR +L GLY + L++++ +P   GYRK+ E  T+ RL V + E D
Sbjct: 6   IKKSTGITGLKVEPNARHILAGLYNQLLKKLEILPPTAGYRKSAELETKFRLGVIENETD 65

Query: 74  WEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 121
             +IE ++  GQ+EELI +A+++LK++  + E   W +PD  +  V+
Sbjct: 66  IVKIENKIYAGQIEELIVQAKNDLKVVDLVHESRAWELPDKNKPPVV 112

[Close]

BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot
Match: P23935 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=9913 GN=NDUFA5 PE=1 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCETPHERLKILYTKILDVLGHIPKNAAYRKYTEQITNEKLSMVKAEPD 64

Query: 74  WEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
            +++E+RL  GQ+EE+I +A++EL L  KMI+W PW
Sbjct: 65  VKKLEERLQGGQIEEVILQAENELSLARKMIQWKPW 100

[Close]

BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot
Match: Q9CPP6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=10090 GN=Ndufa5 PE=1 SV=3)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY KTL  ++  P+   YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPD 64

Query: 74  WEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
            +++E  L  G+VEE+I +A+ EL L  KM++W PW
Sbjct: 65  VKKLEALLQGGEVEEVILQAEKELSLARKMLKWKPW 100

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BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot
Match: Q18359 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Caenorhabditis elegans OX=6239 GN=C33A12.1 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.5e-13
Identity = 35/95 (36.84%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 15  KQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDW 74
           K+TTGI GL V  +    L  +YG+ L+ ++ +P D  YRK  E+  + RL + Q E D 
Sbjct: 40  KKTTGITGLFVNEHPHRALTVVYGRILRALEQIPRDAAYRKYTEAVVKQRLALVQAENDI 99

Query: 75  EQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
           +++E+++G GQ+EE+IE+A+ EL+    +++   W
Sbjct: 100 KKLEEKIGMGQIEEVIEQAEYELETTRAIVDSKAW 134

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BLAST of Csor.00g305260 vs. NCBI nr
Match: KAG6574208.1 (putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013272.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (868), Expect = 3.05e-117
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169

[Close]

BLAST of Csor.00g305260 vs. NCBI nr
Match: XP_022945797.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita moschata] >XP_023542504.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337 bits (863), Expect = 1.76e-116
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVET DKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETADKASQVTE 169

[Close]

BLAST of Csor.00g305260 vs. NCBI nr
Match: XP_022968495.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita maxima])

HSP 1 Score: 332 bits (851), Expect = 1.24e-114
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGS-AQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGS AQKVET DKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSSAQKVETADKASQVTE 170

[Close]

BLAST of Csor.00g305260 vs. NCBI nr
Match: XP_008439300.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 318 bits (814), Expect = 5.05e-109
Identity = 160/169 (94.67%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAREVLIGLY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS G S +KVETT+KASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS-GDSTRKVETTEKASQVTE 168

[Close]

BLAST of Csor.00g305260 vs. NCBI nr
Match: XP_022141236.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Momordica charantia])

HSP 1 Score: 315 bits (806), Expect = 8.39e-108
Identity = 157/169 (92.90%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGL+VVPNAREVLIGLY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLEVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEE+DWE+IEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEDDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDA VPKH+PLHRPGPLPEEFYKTLEAI  GGS+QKVET +KASQVTE
Sbjct: 121 ENDASVPKHIPLHRPGPLPEEFYKTLEAIG-GGSSQKVETAEKASQVTE 168

[Close]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL
Match: A0A6J1G1X4 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449938 PE=3 SV=1)

HSP 1 Score: 337 bits (863), Expect = 8.54e-117
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVET DKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETADKASQVTE 169

[Close]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL
Match: A0A6J1HXB9 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467715 PE=3 SV=1)

HSP 1 Score: 332 bits (851), Expect = 5.98e-115
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGS-AQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGS AQKVET DKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSSAQKVETADKASQVTE 170

[Close]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL
Match: A0A1S3AZ47 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484126 PE=3 SV=1)

HSP 1 Score: 318 bits (814), Expect = 2.45e-109
Identity = 160/169 (94.67%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAREVLIGLY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS G S +KVETT+KASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS-GDSTRKVETTEKASQVTE 168

[Close]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL
Match: A0A6J1CII6 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011683 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 4.06e-108
Identity = 157/169 (92.90%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLRVIGRPLLAKVKQTTGIVGL+VVPNAREVLIGLY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLEVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEE+DWE+IEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEDDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 169
           ENDA VPKH+PLHRPGPLPEEFYKTLEAI  GGS+QKVET +KASQVTE
Sbjct: 121 ENDASVPKHIPLHRPGPLPEEFYKTLEAIG-GGSSQKVETAEKASQVTE 168

[Close]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL
Match: A0A5D3DH67 (Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001080 PE=3 SV=1)

HSP 1 Score: 313 bits (802), Expect = 1.84e-107
Identity = 157/166 (94.58%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAREVLIGLY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TRHRLKVCQEEEDWE IEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQ 166
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS G S +KVETT+KASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAIS-GDSTRKVETTEKASQ 165

[Close]

BLAST of Csor.00g305260 vs. TAIR 10
Match: AT5G52840.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 275.0 bits (702), Expect = 4.0e-74
Identity = 135/169 (79.88%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAR VLI LY KTL+EIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
           TR RL VC+EEEDWE IEKRLGCGQVEELIEEA+DEL LI KMIEWDPWGVPDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 170
           ENDAP+PKHVP HRPGPLPE+FYKTLE + +    +    T    Q+ E
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAATPSDPQLKE 169

[Close]

BLAST of Csor.00g305260 vs. TAIR 10
Match: AT4G28005.1 (BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 9.0e-26
Identity = 75/169 (44.38%), Postives = 87/169 (51.48%), Query Frame = 0


Query: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYGKTLQEIQAVPEDEGYRKAVESF 60
           MF RVIGRPLLAKVKQTTGIV                                       
Sbjct: 1   MFQRVIGRPLLAKVKQTTGIV--------------------------------------- 60

Query: 61  TRHRLKVCQEEEDWEQIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120
                +VC EEEDW  IEKRL CG+VEELIEEA DEL L+ KMI              +I
Sbjct: 61  -----EVCPEEEDWGVIEKRLACGKVEELIEEASDELTLVGKMI--------GSLHPNLI 115

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISSGGSAQKVETTDKASQVTE 170
              AP+PKHVP HRPGPLPEEFY+TL+A++S    +   T+    Q+ E
Sbjct: 121 L--APIPKHVPHHRPGPLPEEFYRTLQAVNSESKTEITATSSSDPQLKE 115

The following BLAST results are available for this feature:

BLAST of Csor.00g305260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX7	5.6e-73	79.88	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
Q559Z4	5.7e-17	41.12	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyos...	[more]
P23935	1.6e-14	42.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=99...	[more]
Q9CPP6	5.0e-13	41.67	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=...	[more]
Q18359	6.5e-13	36.84	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Caenorh...	[more]

BLAST of Csor.00g305260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574208.1	3.05e-117	100.00	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_022945797.1	1.76e-116	99.41	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_022968495.1	1.24e-114	98.82	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_008439300.1	5.05e-109	94.67	PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5...	[more]
XP_022141236.1	8.39e-108	92.90	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]

BLAST of Csor.00g305260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1X4	8.54e-117	99.41	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1HXB9	5.98e-115	98.82	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A1S3AZ47	2.45e-109	94.67	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1CII6	4.06e-108	92.90	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A5D3DH67	1.84e-107	94.58	Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis...	[more]

BLAST of Csor.00g305260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52840.1	4.0e-74	79.88	NADH-ubiquinone oxidoreductase-related	[more]
AT4G28005.1	9.0e-26	44.38	BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-relat...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PFAM	PF04716	ETC_C1_NDUFA5	coord: 22..88 e-value: 3.1E-27 score: 94.2
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PANTHER	PTHR12653	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT	coord: 1..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..169
None	No IPR available	PANTHER	PTHR12653:SF1	BNAA02G10640D PROTEIN	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g305260.m01	Csor.00g305260.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045271	respiratory chain complex I