Csor.00g304660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g304660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionATP-dependent Clp protease ATP-binding subunit clpX
LocationCsor_Chr18: 12491576 .. 12492391 (+)
RNA-Seq ExpressionCsor.00g304660
SyntenyCsor.00g304660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGTAAGCTAAACACCCCCAACGCTCCATTTCTCTTCAAATTCCCCACAAAAAGCCCAAAACTTGGAGGGAAAACCTTCACTTTCTGTCCTAATTTCTGTCTCAGCAGTCAAAACCAAGAAACACCCACCATTTCCACCGCCAAAACCCCTCAAACCCAGGTCCCAAAATCTAATTTTTCCACCGTTAATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCTGAAGGAGGAACAGGAACTGGGTCCGCCAAGATCGACGGCGACGGTGGCAGCGGCGAAGTTTCAGTTTCATTCGATGTGGGCACCCTCTATATCCCGCCATTGACATCTCAAACCACAAAGTTTCTTGGTCTTCCATTGCCACCGTTTCTGAAGATCGACATCGTCCCAGAACTCTTCCACGGGAACATCAATCAAGAATCCGGCAAGGTAATGTCTGAGAAAAGTCCTACCCATCCGAACAAAATCCAATACAAAAATATTGATATGCTATATGTGGAAATTTTGATGCAGATTGAGCTAGAATTCAAGGCAAAGTTCCTATTCTCAGTTGGGAATGTGTATAAAGCTCCTCCATTGCTGGTAAAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAGTGGAAAAGGTGAAAGATTAGATGAAAAGGGGAAGTGCAGATTGGTGGGGGTAGCCATTGTTGACCCCATTGATGATCTGCTTCTCAACTCCTTCCTCTCTCTTCCCACTGAATGCATTGCAAAACTCAATGCCATAATCACGTTCTCTTAG

mRNA sequence

ATGGGTTGTAAGCTAAACACCCCCAACGCTCCATTTCTCTTCAAATTCCCCACAAAAAGCCCAAAACTTGGAGGGAAAACCTTCACTTTCTGTCCTAATTTCTGTCTCAGCAGTCAAAACCAAGAAACACCCACCATTTCCACCGCCAAAACCCCTCAAACCCAGGTCCCAAAATCTAATTTTTCCACCGTTAATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCTGAAGGAGGAACAGGAACTGGGTCCGCCAAGATCGACGGCGACGGTGGCAGCGGCGAAGTTTCAGTTTCATTCGATGTGGGCACCCTCTATATCCCGCCATTGACATCTCAAACCACAAAGTTTCTTGGTCTTCCATTGCCACCGTTTCTGAAGATCGACATCGTCCCAGAACTCTTCCACGGGAACATCAATCAAGAATCCGGCAAGATTGAGCTAGAATTCAAGGCAAAGTTCCTATTCTCAGTTGGGAATGTGTATAAAGCTCCTCCATTGCTGGTAAAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAGTGGAAAAGGTGAAAGATTAGATGAAAAGGGGAAGTGCAGATTGGTGGGGGTAGCCATTGTTGACCCCATTGATGATCTGCTTCTCAACTCCTTCCTCTCTCTTCCCACTGAATGCATTGCAAAACTCAATGCCATAATCACGTTCTCTTAG

Coding sequence (CDS)

ATGGGTTGTAAGCTAAACACCCCCAACGCTCCATTTCTCTTCAAATTCCCCACAAAAAGCCCAAAACTTGGAGGGAAAACCTTCACTTTCTGTCCTAATTTCTGTCTCAGCAGTCAAAACCAAGAAACACCCACCATTTCCACCGCCAAAACCCCTCAAACCCAGGTCCCAAAATCTAATTTTTCCACCGTTAATTTCAAGTCTCTCACAGCCTGTAAGCTTGGCATCTCCAGATACCCTGATTTTGAATACAACGCTGAAGGAGGAACAGGAACTGGGTCCGCCAAGATCGACGGCGACGGTGGCAGCGGCGAAGTTTCAGTTTCATTCGATGTGGGCACCCTCTATATCCCGCCATTGACATCTCAAACCACAAAGTTTCTTGGTCTTCCATTGCCACCGTTTCTGAAGATCGACATCGTCCCAGAACTCTTCCACGGGAACATCAATCAAGAATCCGGCAAGATTGAGCTAGAATTCAAGGCAAAGTTCCTATTCTCAGTTGGGAATGTGTATAAAGCTCCTCCATTGCTGGTAAAAACAGTGCTGACATCTGAGGAATCAAAAGGAAGCATAAGAAGTGGAAAAGGTGAAAGATTAGATGAAAAGGGGAAGTGCAGATTGGTGGGGGTAGCCATTGTTGACCCCATTGATGATCTGCTTCTCAACTCCTTCCTCTCTCTTCCCACTGAATGCATTGCAAAACTCAATGCCATAATCACGTTCTCTTAG

Protein sequence

MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSNFSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPLTSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVKTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAIITFS
Homology
[Close]
BLAST of Csor.00g304660 vs. NCBI nr
Match: KAG6574148.1 (hypothetical protein SDJN03_28035, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013202.1 hypothetical protein SDJN02_25960 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487 bits (1254), Expect = 1.22e-173
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN
Sbjct: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL
Sbjct: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK
Sbjct: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. NCBI nr
Match: XP_023541386.1 (uncharacterized protein LOC111801589 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483 bits (1242), Expect = 8.27e-172
Identity = 239/243 (98.35%), Postives = 242/243 (99.59%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQ+PKSN
Sbjct: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL
Sbjct: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKF GLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV+
Sbjct: 121 TTQTTKFFGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVE 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. NCBI nr
Match: XP_022945057.1 (uncharacterized protein LOC111449415 [Cucurbita moschata])

HSP 1 Score: 483 bits (1242), Expect = 8.27e-172
Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQ+QETPTISTAKTPQTQ+PKSN
Sbjct: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQSQETPTISTAKTPQTQIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFD+GTLYIPPL
Sbjct: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDLGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. NCBI nr
Match: XP_022968031.1 (uncharacterized protein LOC111467398 [Cucurbita maxima])

HSP 1 Score: 479 bits (1232), Expect = 2.77e-170
Identity = 238/243 (97.94%), Postives = 241/243 (99.18%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAP LFKFPTKSPKLGGKTFT CPNFCLSSQNQETPTISTAKTPQTQ+PKSN
Sbjct: 1   MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTV+FKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL
Sbjct: 61  FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. NCBI nr
Match: XP_038895315.1 (uncharacterized protein LOC120083567 [Benincasa hispida])

HSP 1 Score: 398 bits (1023), Expect = 1.71e-138
Identity = 196/243 (80.66%), Postives = 218/243 (89.71%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLN+PN P LFKF +K PKLGGK+  FCP FCL+SQNQET TI T     T++PK +
Sbjct: 1   MGCKLNSPNTPILFKFASKIPKLGGKSINFCPTFCLNSQNQETSTIPT----DTKIPKFD 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
            STV+FKSLTACKLGISRYPDF+Y+AEGGTGTGSAK+ GD  S  VSVSFDV TLYIPPL
Sbjct: 61  ISTVHFKSLTACKLGISRYPDFQYDAEGGTGTGSAKVCGDSSSNHVSVSFDVDTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKFLGLPLPPFLKIDI+PELFHGNINQESGK+ELEF+AKF+FS+G++YKAPPLLVK
Sbjct: 121 TTQTTKFLGLPLPPFLKIDILPELFHGNINQESGKVELEFEAKFMFSIGSLYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVL+SEESKGSIRSG+GERLD+KGKCRLVGVA VDPIDDL LNSFLSLPTECIA LNAII
Sbjct: 181 TVLSSEESKGSIRSGQGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAII 239

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 239

[Close]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match: A0A6J1FZW3 (uncharacterized protein LOC111449415 OS=Cucurbita moschata OX=3662 GN=LOC111449415 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 4.00e-172
Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQ+QETPTISTAKTPQTQ+PKSN
Sbjct: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQSQETPTISTAKTPQTQIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFD+GTLYIPPL
Sbjct: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDLGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match: A0A6J1HTQ8 (uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 1.34e-170
Identity = 238/243 (97.94%), Postives = 241/243 (99.18%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLNTPNAP LFKFPTKSPKLGGKTFT CPNFCLSSQNQETPTISTAKTPQTQ+PKSN
Sbjct: 1   MGCKLNTPNAPVLFKFPTKSPKLGGKTFTLCPNFCLSSQNQETPTISTAKTPQTQIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
           FSTV+FKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL
Sbjct: 61  FSTVHFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T+QTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK
Sbjct: 121 TTQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII
Sbjct: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240

Query: 241 TFS 243
           TFS
Sbjct: 241 TFS 243

[Close]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match: A0A6J1CIF5 (uncharacterized protein LOC111011473 OS=Momordica charantia OX=3673 GN=LOC111011473 PE=4 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 9.90e-136
Identity = 192/243 (79.01%), Postives = 216/243 (88.89%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCK+NTPN   LFKFPTK  +LGGK+ TFCP F + SQNQ+ PTIST  T QTQ+PKS 
Sbjct: 1   MGCKINTPNTQILFKFPTKRAELGGKSTTFCPTFSIHSQNQDAPTISTTTTNQTQIPKSE 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGEVSVSFDVGTLYIPPL 120
            ST++FK+L ACKLGISRYPDFEYNAEGGTGT SA+ DG G   +VSVSFDVGTLYIPPL
Sbjct: 61  ISTLHFKTLRACKLGISRYPDFEYNAEGGTGTASAETDGSGD--QVSVSFDVGTLYIPPL 120

Query: 121 TSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLVK 180
           T++TTKFLGLPLPPFLKIDI+PE FHGNI++ESGK+ELEFKAKF+FSVG++YKAPPLLVK
Sbjct: 121 TTETTKFLGLPLPPFLKIDILPEFFHGNISKESGKVELEFKAKFIFSVGSIYKAPPLLVK 180

Query: 181 TVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAII 240
           TVLTSEES+GSIR GKGERLD++GKCRLVGVA VDPIDD LLNSFLSLPTECIA LNAII
Sbjct: 181 TVLTSEESEGSIRRGKGERLDKEGKCRLVGVATVDPIDDFLLNSFLSLPTECIAILNAII 240

Query: 241 TFS 243
           +FS
Sbjct: 241 SFS 241

[Close]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match: A0A5D3DFF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00280 PE=4 SV=1)

HSP 1 Score: 372 bits (956), Expect = 1.15e-128
Identity = 186/244 (76.23%), Postives = 209/244 (85.66%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLN+PN P LFKF TK  KLGGK+  F P  CL++QNQETPT         ++PKSN
Sbjct: 1   MGCKLNSPNTPILFKFATKRSKLGGKSINFSPTSCLNNQNQETPT---------KIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKI-DGDGGSGEVSVSFDVGTLYIPP 120
            STV+FKSLTACKLGISR+PDF YNAEGGTGTGS KI D +  S  + VSFDVGTLYIPP
Sbjct: 61  ISTVHFKSLTACKLGISRFPDFRYNAEGGTGTGSVKIHDDNSSSSRLLVSFDVGTLYIPP 120

Query: 121 LTSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180
           LT+QTTKFLGLPLPPFLKIDI+PE F G+INQESGK+ELEF++KF+FS+G++YKAPPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDILPEFFQGSINQESGKVELEFESKFIFSIGSLYKAPPLLV 180

Query: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240
           KTVL+SEES+G IRSGKGERLD+KGKCRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLSSEESRGIIRSGKGERLDDKGKCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 235

Query: 241 ITFS 243
           ITFS
Sbjct: 241 ITFS 235

[Close]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match: A0A0A0L5S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 3.94e-128
Identity = 185/244 (75.82%), Postives = 209/244 (85.66%), Query Frame = 0 

Query: 1   MGCKLNTPNAPFLFKFPTKSPKLGGKTFTFCPNFCLSSQNQETPTISTAKTPQTQVPKSN 60
           MGCKLN+PN P LFKF TK   LGGK+  F P  CL+SQNQETPTI T     T++PKSN
Sbjct: 1   MGCKLNSPNTPILFKFSTKRSNLGGKSIKFSPTSCLNSQNQETPTIPTT----TKIPKSN 60

Query: 61  FSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGSAKIDGDGGSGE-VSVSFDVGTLYIPP 120
            STV+FKSLTACKLGISR+PDF+YNAEGGTGTGS KI  D GS   + VSFDV TLYIPP
Sbjct: 61  ISTVHFKSLTACKLGISRFPDFQYNAEGGTGTGSVKIHDDNGSNSRLLVSFDVDTLYIPP 120

Query: 121 LTSQTTKFLGLPLPPFLKIDIVPELFHGNINQESGKIELEFKAKFLFSVGNVYKAPPLLV 180
           LT+QTTKFLGLPLPPFLKID++PE F G+INQESGK+ELEF++KF+FS+G++Y+APPLLV
Sbjct: 121 LTTQTTKFLGLPLPPFLKIDVLPEFFQGSINQESGKVELEFESKFIFSIGSLYRAPPLLV 180

Query: 181 KTVLTSEESKGSIRSGKGERLDEKGKCRLVGVAIVDPIDDLLLNSFLSLPTECIAKLNAI 240
           KTVL+SEES+G IRSGKGERLD+ G CRLVGVA VDPIDDL LNSFLSLPTECIA LNAI
Sbjct: 181 KTVLSSEESRGIIRSGKGERLDDDGNCRLVGVATVDPIDDLFLNSFLSLPTECIANLNAI 240

Query: 241 ITFS 243
           ITFS
Sbjct: 241 ITFS 240

[Close]
BLAST of Csor.00g304660 vs. TAIR 10
Match: AT5G62140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62
Identity = 132/213 (61.97%), Postives = 161/213 (75.59%), Query Frame = 0 

Query: 38  SQNQETPTISTAKTPQ---TQVPKSNFSTVNFKSLTACKLGISRYPDFEYNAEGGTGTGS 97
           SQNQ    IS +  P+   TQ+P + +S V+FK++   KLGISRYPDFEY+  GG+G G+
Sbjct: 27  SQNQ-IKLISNSLNPKPNTTQLPNTLYS-VSFKTIGTGKLGISRYPDFEYSPLGGSGAGT 86

Query: 98  AKIDGD---GGSGEVSVSFDVGTLYIPPLTSQTTKFLGLPLPPFLKIDIVPELFHGNINQ 157
           AK   D     + E+SV F+V TLYIP LTSQTTKFLG PLPPFLKIDI PE+F G INQ
Sbjct: 87  AKKIDDKNRASNSELSVCFNVATLYIPSLTSQTTKFLGFPLPPFLKIDISPEIFQGTINQ 146

Query: 158 ESGKIELEFKAKFLFSV-GNVYKAPPLLVKTVLTSEESKGSIRSGKGERLDEKGKCRLVG 217
           ESGK+ELEF AKF F+  G +Y+AP L+V+TVLT+EES G  + GKGERLDE+GKCRLVG
Sbjct: 147 ESGKVELEFMAKFFFTAGGGIYRAPALVVRTVLTTEESIGENKRGKGERLDEEGKCRLVG 206

Query: 218 VAIVDPIDDLLLNSFLSLPTECIAKLNAIITFS 244
           VA V+ IDDL +N+FLSLP EC+A L AII+ S
Sbjct: 207 VAKVETIDDLFMNTFLSLPAECLADLQAIISVS 237

The following BLAST results are available for this feature:
BLAST of Csor.00g304660 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g304660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574148.11.22e-173100.00hypothetical protein SDJN03_28035, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023541386.18.27e-17298.35uncharacterized protein LOC111801589 [Cucurbita pepo subsp. pepo][more]
XP_022945057.18.27e-17298.35uncharacterized protein LOC111449415 [Cucurbita moschata][more]
XP_022968031.12.77e-17097.94uncharacterized protein LOC111467398 [Cucurbita maxima][more]
XP_038895315.11.71e-13880.66uncharacterized protein LOC120083567 [Benincasa hispida][more]
BLAST of Csor.00g304660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FZW34.00e-17298.35uncharacterized protein LOC111449415 OS=Cucurbita moschata OX=3662 GN=LOC1114494... [more]
A0A6J1HTQ81.34e-17097.94uncharacterized protein LOC111467398 OS=Cucurbita maxima OX=3661 GN=LOC111467398... [more]
A0A6J1CIF59.90e-13679.01uncharacterized protein LOC111011473 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D3DFF51.15e-12876.23Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L5S53.94e-12875.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180240 PE=4 SV=1[more]
BLAST of Csor.00g304660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G62140.11.3e-6261.97unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35320ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNITcoord: 1..243

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g304660.m01Csor.00g304660.m01mRNA