Csor.00g304600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g304600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB6-interacting golgin
Location	Csor_Chr18: 12465683 .. 12468331 (+)
RNA-Seq Expression	Csor.00g304600
Synteny	Csor.00g304600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGGTATTCGATCTGACTTTTGGGCTACAAGATTTTTCTTAATTTAATTCTTATTTTATCTTTTCAGTTTTGCTTATTTGTTATCGGATTATGTTGCAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAGTACGAATTTCTTTTATTACCTTTACGGATCTGGTTTTTCTCACATTATAACTCTCTTTATGTGTTTATTTGCTTATGATTGGTAAATTAGAAGTATTACTTGTTATTCTATCTTCCCTGTTCACGGAAATTTTAGTGTGGGGCGTTATCCTAGTTACATTCTTACATGGTAACAGATATGGATGCAGTACGTCTTTGTTTATAGTTTATAATGCATAAGTGTGCAATTAATGGTACTTGACTTGAGGAAGTCTTGAAGGAACCATCTTGGCTTAGTTAATCTTTTTCTTTTCTTGGTGTATTACGAGTTTGGGTTGTAACCTAATGTCAATACCACTGGTTGTACCAAAAGGTCACAACCATCGTTGCTCTGATACCACTTGTTGTAACCTAATGTCAAAACCCTCGATGCTCTGATACCAATTGTTATGGAGTGGAACGAATGTCTAACCTCTAAACTATGTTCAGGTTGAAGGTTAATTAAGTTAAGATCAATGACATAGTGAATTGTAACAGCTAACAGATATTGTCTACTAAGCCCCCTCATCTCTTTCCAACGTAGTGAATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGTGGGTGTGTATTAAAACCTTGAGGGGAAGCTCAGAAGGGAAAGCCCAAAGAGAACAATATCTACTAACCGTGGGTTTGGATTGTTACAAATGGTATCAGAGTCAAACATCGGGTGGTGTGTTAGCGAGGATGTTGGTTCCCAAGGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCCTTAGGGCGTGGAAGCCTCTCTCTAGTAGATGCATTTTAAACCTTGAGGAAAAGTCTAAAGATGACAATATCTACTAGCGGTGGGCTTGGGCTGTTACATGAACGTATGGAGATTAAGTGAATGATCTGAACATGGGGAATTTTTATGTTTGGAAAAGATTTTTCCCATCATTCTTAAGTTTGAAGTTGGTATAGACGAATGAAGGATAGTGTTGAGGCAAAGTTGAGGAGGGTGTTGATTGGGGTAAATTGAGATATCCGAAGCATTGTAGGATAATGTGATCATTTACCATTGATTAACTCATAATGATATCTCAGACAGAGTTGATATTAGTTCCAACATCTCGTGTTGCTGATGGTTGTGATATTTGACGCCAATACTTAAAGTTGACAAGAACATAGAATTAGACTCTTCATCAAGTTCTTTGTTTTTCTTTTCTTACCCATATCGTTAAATGGGAAATTTTGTTTATTGTTCGGGTCGTAATTTCATTCAGATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGGTTGAGCTTACTGTCAGTTGTTTTATATTCATTATTGATTTTCATTAACTGGCTTTGGCTGACCACCAAGCGTGGTTACATATCTCTAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAGGAACAAGCAAAGAAGGTTTGCCCCTTGTCAATTTTTACACGATTTTAGTGTAATACATACATCTAGGCTGAGATCCCACACCGTTGGAGAGGAGAACGAAAGGGAAAGTCCCTAGCAGACGCGTTTTAAAACCTTGAGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGGGCTAGGGTCGTTACATGGACTTTCTTCTTTAGATCGTTAATTGGAATTTAAGGAATTGAGTCTGATGTTCTCCCTTCAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTACATGACTTTGCATTATATTTGGTTATGTTAAAACTAACAAACACAACTTGTTGATAGTACTGTCGTTTATTCTTAATAGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTAATGATTTCTGCTTGTTAGCCATTAACATAGCCCTGTTGAGAGATTTGATGTAAAACATATGGTTTTCAGGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

mRNA sequence

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAGGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

Coding sequence (CDS)

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAGGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTCGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAATAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA

Protein sequence

MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGVATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPKGRSSADSGWTGSGFDVDGRV

Homology

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BLAST of Csor.00g304600 vs. NCBI nr
Match: KAG6574142.1 (hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476 bits (1226), Expect = 8.41e-169
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. NCBI nr
Match: KAG7013196.1 (hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475 bits (1223), Expect = 2.41e-168
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGK+KNQFHGRGKGIGAVPK
Sbjct: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKRKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. NCBI nr
Match: XP_022945967.1 (uncharacterized protein LOC111450054 [Cucurbita moschata])

HSP 1 Score: 474 bits (1221), Expect = 4.86e-168
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. NCBI nr
Match: XP_022968531.1 (uncharacterized protein LOC111467736 [Cucurbita maxima])

HSP 1 Score: 469 bits (1208), Expect = 4.66e-166
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTM +AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMRSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. NCBI nr
Match: XP_023541472.1 (uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467 bits (1201), Expect = 5.43e-165
Identity = 256/260 (98.46%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALE LRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALEHLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMG+AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQK SSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKASSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL
Match: A0A6J1G2D4 (uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC111450054 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 2.35e-168
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL
Match: A0A6J1HV58 (uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736 PE=4 SV=1)

HSP 1 Score: 469 bits (1208), Expect = 2.25e-166
Identity = 257/260 (98.85%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM
Sbjct: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTM +AQNSRVADSSGV
Sbjct: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMRSAQNSRVADSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           ATSTE TGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGRV
Sbjct: 241 GRSSADSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL
Match: A0A5D3DFA0 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00140 PE=3 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 9.45e-135
Identity = 221/260 (85.00%), Postives = 231/260 (88.85%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLPEIGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQDEEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    + + MG AQNSRV+DSS V
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSH---DVKAMGGAQNSRVSDSSAV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGR 
Sbjct: 241 GRSSADSGWTGSGFDVDGRA 256

[Close]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL
Match: A0A6J1CI49 (uncharacterized protein LOC111011714 OS=Momordica charantia OX=3673 GN=LOC111011714 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 3.82e-128
Identity = 217/264 (82.20%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P LLPEIGPDGLA E+PVIAYTEKIIEE +LQLRKYI+ENYSKIRDVERELA LTM
Sbjct: 1   MASNPSLLPEIGPDGLAMESPVIAYTEKIIEEEQLQLRKYIEENYSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEM+TERI AAKLKEEQAK+AWEAASKVVQDEE IKQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMATERIRAAKLKEEQAKQAWEAASKVVQDEEQIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+NSQLTRLEELKRRMEALN  RVSTSVS    +G+T+G AQNSRV+DSSG 
Sbjct: 121 DLNHLVQESSNSQLTRLEELKRRMEALNPGRVSTSVSY---DGKTVGGAQNSRVSDSSGG 180

Query: 181 ATSTEITG--AKANESARIQAVS--GDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIG 240
            TSTE TG  A+ANESA  Q  +  G  PV+NGQNQKP SE E RGKKKNQ HGRGKGIG
Sbjct: 181 PTSTE-TGVRARANESAPNQGTTSGGAPPVMNGQNQKPPSEGEGRGKKKNQLHGRGKGIG 240

Query: 241 AVPKGRSSADSGWTGSGFDVDGRV 260
           AVPKGRSS DSGWTGSGFDVDGRV
Sbjct: 241 AVPKGRSSTDSGWTGSGFDVDGRV 260

[Close]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL
Match: A0A0A0L8J1 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1)

HSP 1 Score: 342 bits (877), Expect = 2.54e-116
Identity = 203/260 (78.08%), Postives = 213/260 (81.92%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP                   IIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSH---DVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 237

Query: 241 GRSSADSGWTGSGFDVDGRV 260
           GRSSADSGWTGSGFDVDGR 
Sbjct: 241 GRSSADSGWTGSGFDVDGRA 237

[Close]

BLAST of Csor.00g304600 vs. TAIR 10
Match: AT5G51840.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-68
Identity = 159/260 (61.15%), Postives = 191/260 (73.46%), Query Frame = 0


Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M SDP L  EIG DGLAREAPVIAYTEKIIEE ++QLRKYI+ENY+KIRDVERE   L+M
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           E+KLT+GPKKAA+E LRKKIE+STERIHAAKLKEE+A+KA+EAASKVV+DEEA KQ LC+
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCE 121

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+ QV QE +T        V DS+  
Sbjct: 122 DLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQV-QEPET------KSVVDSAPA 181

Query: 181 ATSTEITGAKANESARIQAVSGDAPVVNGQNQKP-SSETEVRGKKKNQFHGRGKGIGAVP 240
           A + +    K   +       G+        Q+P ++E E + KKK Q  GRG+GIG + 
Sbjct: 182 ANANQTHPGKPENN------HGNEEGGKEHGQRPATAEGESKAKKKPQNQGRGRGIGIMN 241

Query: 241 KGRSSADSGWTGSGFDVDGR 260
           KGR     GWTG+GFDVDGR
Sbjct: 242 KGR----GGWTGAGFDVDGR 244

The following BLAST results are available for this feature:

BLAST of Csor.00g304600 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g304600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574142.1	8.41e-169	100.00	hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7013196.1	2.41e-168	99.62	hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945967.1	4.86e-168	99.62	uncharacterized protein LOC111450054 [Cucurbita moschata]	[more]
XP_022968531.1	4.66e-166	98.85	uncharacterized protein LOC111467736 [Cucurbita maxima]	[more]
XP_023541472.1	5.43e-165	98.46	uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g304600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2D4	2.35e-168	99.62	uncharacterized protein LOC111450054 OS=Cucurbita moschata OX=3662 GN=LOC1114500...	[more]
A0A6J1HV58	2.25e-166	98.85	uncharacterized protein LOC111467736 OS=Cucurbita maxima OX=3661 GN=LOC111467736...	[more]
A0A5D3DFA0	9.45e-135	85.00	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CI49	3.82e-128	82.20	uncharacterized protein LOC111011714 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0L8J1	2.54e-116	78.08	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G179140 PE=3 SV=1	[more]

BLAST of Csor.00g304600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51840.1	1.0e-68	61.15	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	COILS	Coil	Coil	coord: 130..157
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..177
None	No IPR available	PANTHER	PTHR35315	ACI13	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g304600.m01	Csor.00g304600.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus