Csor.00g303710 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTCTTGTCTAAACTCAGCGGCTCTGCCGACAAGCCACACGACCAAAATCCAGACAACCACAAGCCATCAGCTTCCGAGCTCTTGTCCAGCGCCAGGTTGGTCGCCGACGCTGCCAAGTCCTCTTTCGGCGGCGGCGGCGGCGAGGTGGACAAGGGCAAAGCTGCCGGAGCAGGCGCTGACCTGCTTGGAGCGGCTTCGGATTACGGCAAATTGGATGAAACCAAGGGAGTTGGTAAGTATGTTAACCAGGCTGAGGAGTATCTCAATAAGTATGAGAAGTCTCATTCTGCCACTCCTGTTCCTGCTGCCGAGCCAAAACCGGCTGAGCCGCCGAAGAAGGAGGAGTCCGGCGAGAAGGACGGCGGAGGATCTGGGTTTGGGGATTACATGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA ATGGATTTCTTGTCTAAACTCAGCGGCTCTGCCGACAAGCCACACGACCAAAATCCAGACAACCACAAGCCATCAGCTTCCGAGCTCTTGTCCAGCGCCAGGTTGGTCGCCGACGCTGCCAAGTCCTCTTTCGGCGGCGGCGGCGGCGAGGTGGACAAGGGCAAAGCTGCCGGAGCAGGCGCTGACCTGCTTGGAGCGGCTTCGGATTACGGCAAATTGGATGAAACCAAGGGAGTTGGTAAGTATGTTAACCAGGCTGAGGAGTATCTCAATAAGTATGAGAAGTCTCATTCTGCCACTCCTGTTCCTGCTGCCGAGCCAAAACCGGCTGAGCCGCCGAAGAAGGAGGAGTCCGGCGAGAAGGACGGCGGAGGATCTGGGTTTGGGGATTACATGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA ATGGATTTCTTGTCTAAACTCAGCGGCTCTGCCGACAAGCCACACGACCAAAATCCAGACAACCACAAGCCATCAGCTTCCGAGCTCTTGTCCAGCGCCAGGTTGGTCGCCGACGCTGCCAAGTCCTCTTTCGGCGGCGGCGGCGGCGAGGTGGACAAGGGCAAAGCTGCCGGAGCAGGCGCTGACCTGCTTGGAGCGGCTTCGGATTACGGCAAATTGGATGAAACCAAGGGAGTTGGTAAGTATGTTAACCAGGCTGAGGAGTATCTCAATAAGTATGAGAAGTCTCATTCTGCCACTCCTGTTCCTGCTGCCGAGCCAAAACCGGCTGAGCCGCCGAAGAAGGAGGAGTCCGGCGAGAAGGACGGCGGAGGATCTGGGTTTGGGGATTACATGAAGGTGGCTGAAGGTTTCTTGAAGAAATGA MDFLSKLSGSADKPHDQNPDNHKPSASELLSSARLVADAAKSSFGGGGGEVDKGKAAGAGADLLGAASDYGKLDETKGVGKYVNQAEEYLNKYEKSHSATPVPAAEPKPAEPPKKEESGEKDGGGSGFGDYMKVAEGFLKK Homology
BLAST of Csor.00g303710 vs. ExPASy Swiss-Prot
Match: Q9ZQ80 (Nodulin-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 7.8e-20 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Csor.00g303710 vs. NCBI nr
Match: XP_022945442.1 (nodulin-related protein 1-like [Cucurbita moschata] >KAG6574054.1 Nodulin-related protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270 bits (689), Expect = 7.35e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Csor.00g303710 vs. NCBI nr
Match: KAG7013113.1 (Nodulin-related protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263 bits (673), Expect = 1.96e-88 Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Csor.00g303710 vs. NCBI nr
Match: XP_022968319.1 (nodulin-related protein 1-like [Cucurbita maxima]) HSP 1 Score: 261 bits (668), Expect = 1.17e-87 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Csor.00g303710 vs. NCBI nr
Match: XP_023542549.1 (nodulin-related protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261 bits (666), Expect = 2.53e-87 Identity = 139/143 (97.20%), Postives = 140/143 (97.90%), Query Frame = 0
BLAST of Csor.00g303710 vs. NCBI nr
Match: XP_038893443.1 (nodulin-related protein 1-like [Benincasa hispida]) HSP 1 Score: 197 bits (500), Expect = 4.01e-62 Identity = 105/141 (74.47%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of Csor.00g303710 vs. ExPASy TrEMBL
Match: A0A6J1G0Y4 (nodulin-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111449671 PE=4 SV=1) HSP 1 Score: 270 bits (689), Expect = 3.56e-91 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Csor.00g303710 vs. ExPASy TrEMBL
Match: A0A6J1HZB1 (nodulin-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467584 PE=4 SV=1) HSP 1 Score: 261 bits (668), Expect = 5.67e-88 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Csor.00g303710 vs. ExPASy TrEMBL
Match: A0A6J1DTQ5 (nodulin-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111023921 PE=4 SV=1) HSP 1 Score: 187 bits (474), Expect = 2.15e-58 Identity = 106/144 (73.61%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of Csor.00g303710 vs. ExPASy TrEMBL
Match: A0A0A0KQS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606550 PE=4 SV=1) HSP 1 Score: 182 bits (463), Expect = 1.05e-56 Identity = 101/143 (70.63%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Csor.00g303710 vs. ExPASy TrEMBL
Match: A0A5D3D177 (Nodulin-related protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00020 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 6.40e-49 Identity = 98/145 (67.59%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Csor.00g303710 vs. TAIR 10
Match: AT2G03440.1 (nodulin-related protein 1 ) HSP 1 Score: 98.2 bits (243), Expect = 5.6e-21 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = 0
BLAST of Csor.00g303710 vs. TAIR 10
Match: AT1G13930.1 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-20 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of Csor.00g303710 vs. TAIR 10
Match: AT1G13930.3 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-20 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of Csor.00g303710 vs. TAIR 10
Match: AT1G13930.2 (Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. ) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-20 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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