Csor.00g303690 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g303690
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Leucine-rich repeat receptor-like protein kinase
Location	Csor_Chr18: 11963581 .. 11965505 (+)
RNA-Seq Expression	Csor.00g303690
Synteny	Csor.00g303690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCGGCGACTTTCACTGCCCGCGTTTTCTGTATTCCTGATCTTGTTCTCTCTGCTCAACGATTCTGTTCTCTGTAAAACACTTAAACGAGATGGTATTGATGACATTATTACCTTTACTTGTGATTTTTTTTTTGTATGGGTTTCAAGGGACTGAATATTTTGTGTTTTTGCAGTTAAAGCATTGAATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCATGGGTTGGAGATGATCCGTGTGGCGATGGTGATCTTCCTGCTTGGTCCGGTGTCACTTGTTCTACTCAAGGAGATTACAGAGAGGTTACTAAATTGTATGATTGGCTCTTAGTTTGTTGAATTGATCATAATTATTAGCAACTCGCCTTGTTGTTCGTTGATTGGTTTATCATTTATTGTTCTATTCTCGTTAAACTCATTGTTGTAAATTTGGTACTGTCCGTATGATGCCTTAAACTGGGTTAATTTGTTGCCTACTGTAGGGAAGTTTATGAGGTTTCTATTGTCGGGCCGTTTCCCACTGCTGTTACTAATCTCTTGGATCTTACTGGGCTGTAAGTATTTCCTTCCCAAAATGTATTTGATAATTTTGTTTCTTCGTGCAATACATGTGTAAATTGTCATAAGTTTTTTATTTAATTTAGTCATTAACTCTCATCCATTTATAACGATTGATTAAATAAGACGTTTGATGATCCAAATAATTGTCCCCATATAATGGGCTTATCTAGGAGGTTGATGATATCGGAATTTAATATCGGAATTTGGGATAGTTTTGTGTGTCACATTGTATTTCTTGAGTGACATATTGGTGAGAGTCTTTGTAGTGTGATAGTGAGGTATTCACTTGTAACACTTTGTTTATTAGTAATTGATTGCTACCCGTGGATGTAGGGGAACTTTTTCTCTCCGAACCACATAAATATCTTGGTGTCTCTTTGTGTAATTCTGTTCATTGGTGTTGTGAGTACATTTGTTCCGCTTTCGGTGCACAATAAGAAGTTTCTATATCCTTATAAGGAGTATTTCGTTTCCCTATCCAACCAATGTAGGATCTCACAATCTACCCCCTTAAGAGTCCAGGGTCCTCGCTGGCACACCGCCCAAAACTTGGCTTTGGTACCATTTGTAACAACCCAAGTCCACCGCTAGCAAATATTGTCCTCTTTGGACTTTCCCTTCCAGGGCTTTCTCTCAAGGTTTTAAAACGTGTCTGCTAGGGTAAGGTTTCCACACCCTTATAAGAAATGTTGCATTCTCCTTCTCAACTAATGTGAGATCTCACCCTCCCACCCAACGCCCCAAGTCTCCTCTCTAAAAAATGGAGAAAACTGCTGTTCAAAGTTGCCAGTGTTTTTCTTCCTGCTTAAACACTACGAACGTCATTTCATGCTTTGTAGAGGCAAATATGTTTTGTATGACATTCCTTAGCTAAAACACAATACACCTAACATTATATTTTTCAAGCCTGTTTGTAACGTGGTTCCATGTCTTTTCACATTTCATGCTATCTTGACCAACACCTGCACTTTCTGCCTTCCTCTTACTCTACATAGGAAAAATCATCAGTCTTATGCTCTGCATTATCCTTTGCAACTGGCAAGCTCCTTTGCTTGTCAAGATATTCATAAAATAGGACTTCTGTTCACACACAGGTTCTTGGACTACAACCAATTTAGTGGGAGAATTCCAGATGATTTTTACAAACATCCATTATTGAAAGAGATGTGAGTTATTTCTTCTTAGTTCTCGTGTCATTATCACTTGATTAAGTAGTAACTGAAGCCTGATCTTTGGTTTATTTCACATATATAATCGATAGGTTCATCGAGGGTAATGCCTTTAGGCAACAAGTGAAGCCAATAAGCATTCACAAAGCTCTTGAAGTTTCAGACGCAGAATTCCTCGTTTAA

mRNA sequence

ATGGCGCGGCGACTTTCACTGCCCGCGTTTTCTGTATTCCTGATCTTGTTCTCTCTGCTCAACGATTCTGTTCTCTGTAAAACACTTAAACGAGATGTTAAAGCATTGAATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCATGGGTTGGAGATGATCCGTGTGGCGATGGTGATCTTCCTGCTTGGTCCGGTGTCACTTGTTCTACTCAAGGAGATTACAGAGAGGTTACTAAATTGGAAGTTTATGAGGTTTCTATTGTCGGGCCGTTTCCCACTGCTGTTACTAATCTCTTGGATCTTACTGGGCTGTTCTTGGACTACAACCAATTTAGTGGGAGAATTCCAGATGATTTTTACAAACATCCATTATTGAAAGAGATGTTCATCGAGGGTAATGCCTTTAGGCAACAAGTGAAGCCAATAAGCATTCACAAAGCTCTTGAAGTTTCAGACGCAGAATTCCTCGTTTAA

Coding sequence (CDS)

ATGGCGCGGCGACTTTCACTGCCCGCGTTTTCTGTATTCCTGATCTTGTTCTCTCTGCTCAACGATTCTGTTCTCTGTAAAACACTTAAACGAGATGTTAAAGCATTGAATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCATGGGTTGGAGATGATCCGTGTGGCGATGGTGATCTTCCTGCTTGGTCCGGTGTCACTTGTTCTACTCAAGGAGATTACAGAGAGGTTACTAAATTGGAAGTTTATGAGGTTTCTATTGTCGGGCCGTTTCCCACTGCTGTTACTAATCTCTTGGATCTTACTGGGCTGTTCTTGGACTACAACCAATTTAGTGGGAGAATTCCAGATGATTTTTACAAACATCCATTATTGAAAGAGATGTTCATCGAGGGTAATGCCTTTAGGCAACAAGTGAAGCCAATAAGCATTCACAAAGCTCTTGAAGTTTCAGACGCAGAATTCCTCGTTTAA

Protein sequence

MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

Homology

[Close]

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot
Match: Q9FMD7 (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 5   LSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPA 64
           L L  F  F+ L S+ +D      L+ D +AL  ++  +  R +   +   PC       
Sbjct: 7   LGLSVFFFFICLVSVTSD------LEADRRALIALRDGVHGRPLLWNLTAPPC------T 66

Query: 65  WSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKH 124
           W GV C +      VT L +  V + GP P A+ NL  L  L   +N  +G +P DF   
Sbjct: 67  WGGVQCES----GRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANL 126

Query: 125 PLLKEMFIEGNAFRQQV 142
            LL+ ++++GNAF  ++
Sbjct: 127 TLLRYLYLQGNAFSGEI 127

[Close]

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot
Match: Q9M8T0 (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 3   RRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASL-GWRVVYSWVGDDPCGDGD 62
           R+LSL    VFL +F L   + +   L+ D +AL  ++ S+ G  ++++     PC    
Sbjct: 5   RKLSLSV--VFLFVFYL---AAVTSDLESDRRALLAVRNSVRGRPLLWNMSASSPCN--- 64

Query: 63  LPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPT-AVTNLLDLTGLFLDYNQFSGRIPDD 122
              W GV C    D   VT L +    + G  P   + NL  L  L L +N  SG IP D
Sbjct: 65  ---WHGVHC----DAGRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSD 124

Query: 123 FYKHPLLKEMFIEGNAFRQQV 142
           F    LL+ ++++GNAF  ++
Sbjct: 125 FSNLVLLRYLYLQGNAFSGEI 130

[Close]

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot
Match: Q6R2K2 (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 38/114 (33.33%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 12  VFLILFSLLNDSVLCKTLKRDVKALNEIKASL-------GWRVVYSWVGDDPCGDGDLPA 71
           VF+  F +    VL KT  +DV ALN+   S+       GW    S  G DPCGD    +
Sbjct: 11  VFIACFGIFTSVVLAKTDSQDVSALNDAYKSMNSPSKLKGW----SSSGGDPCGD----S 70

Query: 72  WSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIP 119
           W G+TC        VT+++V    + G     + NL  LT L +  N  +G +P
Sbjct: 71  WDGITCKGS----SVTEIKVSGRGLSGSLGYQLGNLKSLTYLDVSKNNLNGNLP 112

[Close]

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot
Match: C0LGI2 (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana OX=3702 GN=At1g67720 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 40/122 (32.79%), Postives = 60/122 (49.18%), Query Frame = 0


Query: 27  KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPA-WSGVTCSTQGDYREVTKLEVY 86
           KT + DV  L+ I+ S+     ++  G DPC    +P  WS V CS+    R VTK+ + 
Sbjct: 369 KTDRSDVSVLDAIR-SMSPDSDWASEGGDPC----IPVLWSWVNCSSTSPPR-VTKIALS 428

Query: 87  EVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPIS 146
             ++ G  P  +  +  LT L+LD N+ +G +P D  K   LK M +E N     + P  
Sbjct: 429 RKNLRGEIPPGINYMEALTELWLDDNELTGTLP-DMSKLVNLKIMHLENNQLSGSLPPYL 483

Query: 147 IH 148
            H
Sbjct: 489 AH 483

[Close]

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot
Match: Q9LP77 (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05
Identity = 40/142 (28.17%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 6   SLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSW--VGDDPCGDGDLP 65
           S+   SVFL L  L       + L  D  AL  +++++G R  + W      PC      
Sbjct: 10  SMAILSVFLSLLLLSLPLPSTQDLNADRTALLSLRSAVGGR-TFRWNIKQTSPCN----- 69

Query: 66  AWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAV-TNLLDLTGLFLDYNQFSGRIPDDFY 125
            W+GV C +      VT L +  V++ G  P  +  NL  L  L L  N  SG +P D  
Sbjct: 70  -WAGVKCES----NRVTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLS 129

Query: 126 KHPLLKEMFIEGNAFRQQVKPI 145
               L+ ++++GN F  ++  +
Sbjct: 130 TSSNLRHLYLQGNRFSGEIPEV 140

[Close]

BLAST of Csor.00g303690 vs. NCBI nr
Match: KAG6574052.1 (putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (826), Expect = 3.63e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDD 120
           DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDD
Sbjct: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDD 120

Query: 121 FYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV 159
           FYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
Sbjct: 121 FYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV 159

[Close]

BLAST of Csor.00g303690 vs. NCBI nr
Match: KAB2073362.1 (hypothetical protein ES319_A07G077300v1 [Gossypium barbadense] >PPR83505.1 hypothetical protein GOBAR_AA37204 [Gossypium barbadense])

HSP 1 Score: 226 bits (576), Expect = 4.64e-73
Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 27  KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPAWSGVTCSTQGDYREVTKLEVYE 86
           KTLKRDVKALNEIKASLGWRVVY+W+GDDPCGDGDLP WSGVTCSTQGDYR VT+LEVY 
Sbjct: 27  KTLKRDVKALNEIKASLGWRVVYAWIGDDPCGDGDLPPWSGVTCSTQGDYRVVTELEVYA 86

Query: 87  VSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISI 146
           VSI+GPFP A+TNLLDLT L+LD+NQFSGRIP+  YKHP LKE++I+GN FR  V PI  
Sbjct: 87  VSIIGPFPIALTNLLDLTRLYLDHNQFSGRIPNALYKHPFLKELYIDGNGFRPGVDPIGA 146

Query: 147 HKALEVSDAEFLV 159
           HK LE+SD +FLV
Sbjct: 147 HKVLELSDTDFLV 159

[Close]

BLAST of Csor.00g303690 vs. NCBI nr
Match: XP_023523785.1 (LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221 bits (564), Expect = 6.87e-69
Identity = 144/330 (43.64%), Postives = 146/330 (44.24%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF VF+I FSLLND VLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCVFIICFSLLNDPVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. NCBI nr
Match: XP_022957362.1 (LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita moschata] >KAG7032246.1 Leucine-rich repeat receptor protein kinase MSP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221 bits (562), Expect = 1.38e-68
Identity = 143/330 (43.33%), Postives = 146/330 (44.24%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF VF+I FS+LND VLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCVFIICFSMLNDPVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. NCBI nr
Match: XP_022984073.1 (LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita maxima])

HSP 1 Score: 220 bits (560), Expect = 2.76e-68
Identity = 143/330 (43.33%), Postives = 145/330 (43.94%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF VF+I FSLLND V CKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCVFIICFSLLNDPVFCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL
Match: A0A2P5VXF4 (LRRNT_2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G077300v1 PE=4 SV=1)

HSP 1 Score: 226 bits (576), Expect = 2.25e-73
Identity = 104/133 (78.20%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 27  KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPAWSGVTCSTQGDYREVTKLEVYE 86
           KTLKRDVKALNEIKASLGWRVVY+W+GDDPCGDGDLP WSGVTCSTQGDYR VT+LEVY 
Sbjct: 27  KTLKRDVKALNEIKASLGWRVVYAWIGDDPCGDGDLPPWSGVTCSTQGDYRVVTELEVYA 86

Query: 87  VSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISI 146
           VSI+GPFP A+TNLLDLT L+LD+NQFSGRIP+  YKHP LKE++I+GN FR  V PI  
Sbjct: 87  VSIIGPFPIALTNLLDLTRLYLDHNQFSGRIPNALYKHPFLKELYIDGNGFRPGVDPIGA 146

Query: 147 HKALEVSDAEFLV 159
           HK LE+SD +FLV
Sbjct: 147 HKVLELSDTDFLV 159

[Close]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL
Match: A0A6J1GYX2 (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita moschata OX=3662 GN=LOC111458785 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 6.67e-69
Identity = 143/330 (43.33%), Postives = 146/330 (44.24%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF VF+I FS+LND VLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCVFIICFSMLNDPVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL
Match: A0A6J1J9I3 (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita maxima OX=3661 GN=LOC111482491 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.34e-68
Identity = 143/330 (43.33%), Postives = 145/330 (43.94%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF VF+I FSLLND V CKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCVFIICFSLLNDPVFCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL
Match: A0A6J1D4U7 (leucine-rich repeat receptor protein kinase MSP1-like OS=Momordica charantia OX=3673 GN=LOC111017606 PE=4 SV=1)

HSP 1 Score: 215 bits (547), Expect = 1.23e-66
Identity = 140/330 (42.42%), Postives = 145/330 (43.94%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF +FLI FSLL+D +LCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCLFLICFSLLHDPILCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTCSTQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL
Match: A0A1S3BF09 (probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis melo OX=3656 GN=LOC103489171 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 4.94e-66
Identity = 138/330 (41.82%), Postives = 144/330 (43.64%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MARRLSLPAF +F + FSLLND +LCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MARRLSLPAFCLFFLSFSLLNDLILCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGL-------------- 120
           DLP WSGVTC+TQGDYR VTKLEVY VSIVGPFPTAVTNLLDLT L              
Sbjct: 61  DLPPWSGVTCTTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQ 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 IGRLKRLQILNLRWNKLQDVIPSEIGELKSLTHLYLSFNNFKGEIPRELASLPELRYLHL 180

[Close]

BLAST of Csor.00g303690 vs. TAIR 10
Match: AT5G61240.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-43
Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MA R  L    + + +FSLL      KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MASRCEL----LLICVFSLLIAFAHSKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDD 120
           DLP WSGVTCSTQGDYR VT+LEVY VSIVGPFP AVTNLLDLT L L  N+ +G IP  
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQ 120

Query: 121 FYKHPLLKEMFIEGNAFRQQVKP 144
             +   LK + +  N  +  + P
Sbjct: 121 IGRLKRLKVLNLRWNKLQDVIPP 139

[Close]

BLAST of Csor.00g303690 vs. TAIR 10
Match: AT5G61240.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42
Identity = 89/131 (67.94%), Postives = 98/131 (74.81%), Query Frame = 0


Query: 1   MARRLSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60
           MA R  L    + + +FSLL      KTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG
Sbjct: 1   MASRCEL----LLICVFSLLIAFAHSKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDG 60

Query: 61  DLPAWSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDD 120
           DLP WSGVTCSTQGDYR VT+LEVY VSIVGPFP AVTNLLDLT L L  N+ +G IP  
Sbjct: 61  DLPPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQ 120

Query: 121 FYKHPLLKEMF 132
             +   LK ++
Sbjct: 121 IGRLKRLKVLY 127

[Close]

BLAST of Csor.00g303690 vs. TAIR 10
Match: AT1G13910.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 0


Query: 9   AFSVFLIL----FSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPA 68
           + S++LIL      LL +    KTLKRD+KALNEIK  +GWR+VYSWVGDDPCGDG LP 
Sbjct: 5   SLSLYLILRIYALLLLFNVSFAKTLKRDMKALNEIKKLVGWRLVYSWVGDDPCGDGVLPP 64

Query: 69  WSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKH 128
           WSGVTCS  GDYR V KLEVY +SIVG FP A+T LLDLT L +  N+ +G IP +  + 
Sbjct: 65  WSGVTCSKVGDYRVVVKLEVYSMSIVGNFPKAITKLLDLTVLDMHNNKLTGPIPPEIGRL 124

Query: 129 PLLKEMFIEGNAFRQQVKP 144
             L  + +  N  +Q + P
Sbjct: 125 KRLITLNLRWNKLQQALPP 143

[Close]

BLAST of Csor.00g303690 vs. TAIR 10
Match: AT2G45340.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-12
Identity = 43/137 (31.39%), Postives = 69/137 (50.36%), Query Frame = 0


Query: 11  SVFLILFSLLNDSVLCKTLKRDVKALNEIKASLG--WRVVYSWVGD-DPCGDGDLPAWSG 70
           ++FLILF     S L  +   ++  L +IK+SL    R + SW  D DPC  G   ++ G
Sbjct: 6   TLFLILFFFFLSSALSSS-SSELDILLDIKSSLDPEKRFLTSWTPDADPCSSG---SFDG 65

Query: 71  VTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKHPLL 130
           V C      R V  + +  + + G  P ++  L  LTGL+L +N  +G IP D    PLL
Sbjct: 66  VACDGN---RRVANISLQGMGLTGTIPPSIGLLTSLTGLYLHFNSLTGHIPKDISNLPLL 125

Query: 131 KEMFIEGNAFRQQVKPI 145
            ++++  N    ++ P+
Sbjct: 126 TDLYLNVNNLSGEIPPL 135

[Close]

BLAST of Csor.00g303690 vs. TAIR 10
Match: AT5G16590.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 5   LSLPAFSVFLILFSLLNDSVLCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPA 64
           L L  F  F+ L S+ +D      L+ D +AL  ++  +  R +   +   PC       
Sbjct: 7   LGLSVFFFFICLVSVTSD------LEADRRALIALRDGVHGRPLLWNLTAPPC------T 66

Query: 65  WSGVTCSTQGDYREVTKLEVYEVSIVGPFPTAVTNLLDLTGLFLDYNQFSGRIPDDFYKH 124
           W GV C +      VT L +  V + GP P A+ NL  L  L   +N  +G +P DF   
Sbjct: 67  WGGVQCES----GRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANL 126

Query: 125 PLLKEMFIEGNAFRQQV 142
            LL+ ++++GNAF  ++
Sbjct: 127 TLLRYLYLQGNAFSGEI 127

The following BLAST results are available for this feature:

BLAST of Csor.00g303690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMD7	1.6e-08	29.93	Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9M8T0	1.7e-07	31.91	Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q6R2K2	1.1e-06	33.33	Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=...	[more]
C0LGI2	1.5e-06	32.79	Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidop...	[more]
Q9LP77	1.2e-05	28.17	Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of Csor.00g303690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574052.1	3.63e-111	100.00	putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAB2073362.1	4.64e-73	78.20	hypothetical protein ES319_A07G077300v1 [Gossypium barbadense] >PPR83505.1 hypot...	[more]
XP_023523785.1	6.87e-69	43.64	LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita pepo subsp. pe...	[more]
XP_022957362.1	1.38e-68	43.33	LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita moschata] >KAG...	[more]
XP_022984073.1	2.76e-68	43.33	LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita maxima]	[more]

BLAST of Csor.00g303690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5VXF4	2.25e-73	78.20	LRRNT_2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G0...	[more]
A0A6J1GYX2	6.67e-69	43.33	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita moschata OX=...	[more]
A0A6J1J9I3	1.34e-68	43.33	LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1D4U7	1.23e-66	42.42	leucine-rich repeat receptor protein kinase MSP1-like OS=Momordica charantia OX=...	[more]
A0A1S3BF09	4.94e-66	41.82	probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucumis m...	[more]

BLAST of Csor.00g303690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61240.1	1.5e-43	63.64	Leucine-rich repeat (LRR) family protein	[more]
AT5G61240.2	1.7e-42	67.94	Leucine-rich repeat (LRR) family protein	[more]
AT1G13910.1	1.5e-35	54.68	Leucine-rich repeat (LRR) family protein	[more]
AT2G45340.1	5.3e-12	31.39	Leucine-rich repeat protein kinase family protein	[more]
AT5G16590.1	1.1e-09	29.93	Leucine-rich repeat protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 30..71 e-value: 4.6E-5 score: 23.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 30..154 e-value: 3.8E-15 score: 57.8
None	No IPR available	PANTHER	PTHR46662	DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN	coord: 93..158 coord: 8..94
None	No IPR available	PANTHER	PTHR46662:SF44	LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED	coord: 93..158 coord: 8..94
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 31..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g303690.m01	Csor.00g303690.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane