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Csor.00g302680 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGACGACGACGACGACGACGAAGACGACAACCGACCGACGGACCGAGCTCCATCATCTGAAATGGTGAATTCGAGTAGAAATCTGAGATTTGGATTGAATGTTGAATTCCATAGCTCTGAAAAACGCTAATTCTTGTGTATTAATTATAATTACATTTCATTATAGTCTTGGTTCTTTCTTCTGAATAAAGAACAATAAGGATTAGTCGAAAAAGAAAGCACAATTTCTTTGTTGATTCTGAGCTGCTGCTGATAAGATCCAATTAAGTTCATCTCTGATCTCTGTATAATGTTTTCCATTAAAGAAGAACTTAATATCTGAGGTGCGGCTGGGTTCCCGGAGCCATGGACTCGATTAATATACGCAGTGGGTCAGGTCGGGTTGGGTTAATCGGAGGAGTTTGGCAGATGGGTGCCAGTTGGTGTTGAATTCTTCCTCCGTGGCGTTCTGCCCTTGCTTCTTTGATACACTGGTTTACATGTGGACAAAATTTACACTTTTATGGATTTTTTTTTAATTTTTTAATTTTTTAAATAATTTGTAAAGAATTATCCAAGATATCAAAATTTTATCGGTATTTTCTTAATCGAGAGATTAAACGATCGAATGTGTGAGCTACCGGGTTGATATTAACAAACGATATTGTCGAGAGTGACAACATGAGCATAACAGAGCACGGTAAATTATCTAGGTCAAATATAACGTGTAAGGTCGTTAAGTGCATACTATTCATGACCATGACCGATGAATTATTGATCTCGTGAGAGTGTTTGACCTACCTAATTAAAACGCACAAAACGCCCTTGCTCGCTCTAATACTCCACAACCCAATGGATAAATAACGTTTCTATCGTTAAATGACGAGAAACTTCATATAATCTATTTTCCTCTCTTTTTCTCGGGTTAATAATTATTATTTTAAAATATTTTAAAAAGTAAAATATTGAATTTTTGTAATTTTTTTACTATAAAAGTTGAATATTACAAAAATTTAAATTTTAGGCTAGCAACTGGAGCCACTCAAATATAGTTCATAACCCAATCTAACTATGGCGCCACTCCAATAGAGCTTATAACCCCAACCTAACCGTGACGGGAGTCTCTCAAATAGAGTTCATAACCCAACCTAACCGTGGCACCACTCCAATAGAGTTCATAACCCAACCTATGGAGCCACTCAAATAGAGTTTATAACCCAACCTAACCGTGGAGCGACTCAAATAGAGTTTATAACCCAACCTAACTGTGGAGCCACTCAAATAGAGTTTATAACCCAACCTAGCCCACTATTTTCGGGTCGAGTTTTTTTTTTTTTTTTAATTATTTAAAAAATTGTATTTATCCACGTCTACAGATGAAAAAAAATATATATCATATATCATAATCAAGAGTGAGTATCGAACCCCCGCCTTCTCGCTAGAAATGGACAGAACCTAGGCCATTATAATAAATTACATTAATGGATTAATCAAATTAAAATACCAAATTAATTTGCAATGATATTTTCGGATTCCCATTCGCAACTCCTCCATCGGCAACAGAGCTAGAAACTGCGCGATGTTGCAGGCTTCCATTAACCCGATCCAATCGCCGCCTCCGGCGTTCCATCACAAGACAGCAGGACTCGCATTCCCTTCATCACTTGCCTGCACCATCAGCCGGCCGTCGCCGACATCGTTACGTCTGCGATCATCCTCAGTAACGAGAACCTCCATCTCTTCTTCATTTCAACTCAAAGCCGGAAAAGGGTACTTTCATCAAATAATTCTTAATATCTTCTTCCCAATTAGCATTCTATGTCAAGATCTTTGATATATTGTTCTCTCCTATGGCTTCTGCTTGCTCCACATTACTGGACCTTCGCGCATTTTGACCCCACGTCCCCTCTCTCGAGGAAAATCTAATTGATTATGATTTTAGATGAACGAATTGGCTTTTGTACTGATAATAGTTTTATTTATTTACTCGTGTTTGGAATTCGAGTGGAGTGTTGATTTGTTTATATATATTGCATCGGGTTCTTCAATTAGGGATTGGTTCTTTCGATGTTTATCCTTTTGCATTGCGATTGTTGTTTCTGTTTAAATTTCCCTGATGTAATGCCTAGTTCTTGCTGAAAGATGTAAAAGATTGAATACCTTAGCCATTACAGGATGGATGGCTTCCTAGATGTTGAGCTCAAAGTTCGTGATTATGAGCTGGATCAGTTTGGGGTTGTCAACAATGCTATTTATGCGAGTTATTGCCAACATGGTAAAATCAAGAAGTTTGTATATGCTAAGTGATGTGTGTATGAATTAGGAATTTATTTGTCCTCACTAGGGGTTTCTGTTTCTACCTTCTCTAGAAGTTTGTAGATTGTTTGAAAACGAAATGTGGAGCCTTCACCACTGCAAATGTTGGTGTTTGTTTATGTCCAATGGGTCCAGAATTTCTGTTCAAAAGAGCATTGATATGGTTGATTCACGTACTCATAAGCATTTTATTTCATATCGTCCTCTTTTGGCTTTTCCTTTCGGGTTTCCGCTCAAGGTTTTGTAAACGCATCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTTCTCCCCAATCGATGTGGGATCTCATAATCCACCTCTCTTCGAGGCCAGTATCCTTGCTGGCACTCATTCCCTTCTCCAATCGATGTGGGTCCCTCCAATCCACCCCCTTCAGGATCTAGCGTCTTGCTGGCACACCACCTCATGTCCACCTCCCTTCAGGGCTCAGCCTCCTTGCTGGCATATCGCCCGATGTCTGGCTCTAGTACCATTTTGTGATAGCTGAAACTCACCGCTAGCATATATTGTCTTCTTTGGACTTTCCATTTCGGGTTTTCCCTCAAGGTTTTCAAAACGCAACAATTCTTCGTTCTCCTCCCCAACCGATCATAGTACTTGACGGACAGAATGCTGTTTGGAAACACCAGAAGTTATTCTTTTCTGTTTATTGCTTAAGTCAACATGAAGTTGTCTTGTTAACTCCATTTGAAGTATACTACCCTCTCTTCTTGATAGTGTAATACTATTGTTGACAAGCCTAAACTTTGGGGGGCATTAGTCTCGAAGAAGTAAAATATTGGACTCGAACGGGTGCTCGTAAATGATTTTGTGGTAGCCTCTGAACTTTGAAGTGTTTCTCGACCTAGATTGAGTTACGAAACAGATAGAAGAACTTTTTCACCACCAAGATTTTGAATCATTGATCAGTTGTAGCTCGATTTCTCGAATCTCATGTTTTAAATCACATTATAATTGCTTTTCAAGACTTTTAATCAAAATCTTAATCAGGTCGTCATGAACTGCTGGAAAGCATAGGCCTCAGTCCTGATGCAGTTGCTCGTGATGGCGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTTGCACCACTTAAAGTATGATGCAATTTGTTGGTACAACTGATGATTGATTACATACTTTACTTAATATCTTACTACTTATGCTGCCTTGATGCATCCAACTAGAGCGGAGACAGATTTGTTGTTAAGGTAAGGATCTCGGGGATGTCGGCTGCTCGCTTCTACATCGATCATTTCATTTTCAAGCTTCCAAACATGGAGGTATGCAATGCAACCATTAATTTTGATATCAGTTTATTTACCTTGTCTGGATGCCTAGAACTTCATAACCCATTTCCTGTCCTGTTTTCTTTCCCTAGCCAATCTTGGAGGCAAAGGGTACAGCAGTTTGGCTCAACAAAAGCTATCGTCCAGTGCGTATCCCGCACGAATTTCTATCCAAGTTTGCTCAGTTCGTTCGGGATCATGACTCGAAATGA ATGGACGACGACGACGACGACGACGAAGACGACAACCGACCGACGGACCGAGCTCCATCATCTGAAATGGCTTCCATTAACCCGATCCAATCGCCGCCTCCGGCGTTCCATCACAAGACAGCAGGACTCGCATTCCCTTCATCACTTGCCTGCACCATCAGCCGGCCGTCGCCGACATCGTTACGTCTGCGATCATCCTCAGTAACGAGAACCTCCATCTCTTCTTCATTTCAACTCAAAGCCGGAAAAGGGATGGATGGCTTCCTAGATGTTGAGCTCAAAGTTCGTGATTATGAGCTGGATCAGTTTGGGGTTGTCAACAATGCTATTTATGCGAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGCATAGGCCTCAGTCCTGATGCAGTTGCTCGTGATGGCGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTTGCACCACTTAAAAGCGGAGACAGATTTGTTGTTAAGGTAAGGATCTCGGGGATGTCGGCTGCTCGCTTCTACATCGATCATTTCATTTTCAAGCTTCCAAACATGGAGCCAATCTTGGAGGCAAAGGGTACAGCAGTTTGGCTCAACAAAAGCTATCGTCCAGTGCGTATCCCGCACGAATTTCTATCCAAGTTTGCTCAGTTCGTTCGGGATCATGACTCGAAATGA ATGGACGACGACGACGACGACGACGAAGACGACAACCGACCGACGGACCGAGCTCCATCATCTGAAATGGCTTCCATTAACCCGATCCAATCGCCGCCTCCGGCGTTCCATCACAAGACAGCAGGACTCGCATTCCCTTCATCACTTGCCTGCACCATCAGCCGGCCGTCGCCGACATCGTTACGTCTGCGATCATCCTCAGTAACGAGAACCTCCATCTCTTCTTCATTTCAACTCAAAGCCGGAAAAGGGATGGATGGCTTCCTAGATGTTGAGCTCAAAGTTCGTGATTATGAGCTGGATCAGTTTGGGGTTGTCAACAATGCTATTTATGCGAGTTATTGCCAACATGGTCGTCATGAACTGCTGGAAAGCATAGGCCTCAGTCCTGATGCAGTTGCTCGTGATGGCGATGCATTAGCTTTATCAGAATTGTCTTTGAAGTTCCTTGCACCACTTAAAAGCGGAGACAGATTTGTTGTTAAGGTAAGGATCTCGGGGATGTCGGCTGCTCGCTTCTACATCGATCATTTCATTTTCAAGCTTCCAAACATGGAGCCAATCTTGGAGGCAAAGGGTACAGCAGTTTGGCTCAACAAAAGCTATCGTCCAGTGCGTATCCCGCACGAATTTCTATCCAAGTTTGCTCAGTTCGTTCGGGATCATGACTCGAAATGA MDDDDDDDEDDNRPTDRAPSSEMASINPIQSPPPAFHHKTAGLAFPSSLACTISRPSPTSLRLRSSSVTRTSISSSFQLKAGKGMDGFLDVELKVRDYELDQFGVVNNAIYASYCQHGRHELLESIGLSPDAVARDGDALALSELSLKFLAPLKSGDRFVVKVRISGMSAARFYIDHFIFKLPNMEPILEAKGTAVWLNKSYRPVRIPHEFLSKFAQFVRDHDSK Homology
BLAST of Csor.00g302680 vs. ExPASy Swiss-Prot
Match: S4TE15 (Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=3486 GN=TE3 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.2e-62 Identity = 127/201 (63.18%), Postives = 153/201 (76.12%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy Swiss-Prot
Match: Q8W583 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT3 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.6e-59 Identity = 114/167 (68.26%), Postives = 131/167 (78.44%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy Swiss-Prot
Match: Q9C7I5 (Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT1 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.5e-52 Identity = 110/189 (58.20%), Postives = 134/189 (70.90%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy Swiss-Prot
Match: F4HX80 (Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT4 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.5e-52 Identity = 109/187 (58.29%), Postives = 131/187 (70.05%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy Swiss-Prot
Match: Q9C7I8 (Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT2 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.0e-50 Identity = 96/162 (59.26%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Csor.00g302680 vs. NCBI nr
Match: KAG6573951.1 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 437 bits (1124), Expect = 2.03e-154 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Csor.00g302680 vs. NCBI nr
Match: XP_023541637.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394 bits (1012), Expect = 1.17e-137 Identity = 198/203 (97.54%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Csor.00g302680 vs. NCBI nr
Match: XP_023541635.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541636.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389 bits (998), Expect = 1.77e-135 Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of Csor.00g302680 vs. NCBI nr
Match: XP_022945224.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita moschata] >XP_022945225.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 387 bits (994), Expect = 6.49e-135 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Csor.00g302680 vs. NCBI nr
Match: XP_022968132.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima] >XP_022968134.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 382 bits (981), Expect = 6.22e-133 Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy TrEMBL
Match: A0A6J1G0B9 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449530 PE=4 SV=1) HSP 1 Score: 387 bits (994), Expect = 3.14e-135 Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy TrEMBL
Match: A0A6J1HST6 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467460 PE=4 SV=1) HSP 1 Score: 382 bits (981), Expect = 3.01e-133 Identity = 193/203 (95.07%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy TrEMBL
Match: A0A1S3BG49 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489290 PE=4 SV=1) HSP 1 Score: 324 bits (831), Expect = 2.14e-110 Identity = 168/204 (82.35%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1) HSP 1 Score: 324 bits (831), Expect = 1.55e-105 Identity = 168/204 (82.35%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Csor.00g302680 vs. ExPASy TrEMBL
Match: A0A6J1DA66 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111018616 PE=4 SV=1) HSP 1 Score: 308 bits (790), Expect = 3.61e-104 Identity = 161/203 (79.31%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Csor.00g302680 vs. TAIR 10
Match: AT1G68260.1 (Thioesterase superfamily protein ) HSP 1 Score: 229.6 bits (584), Expect = 2.6e-60 Identity = 114/167 (68.26%), Postives = 131/167 (78.44%), Query Frame = 0
BLAST of Csor.00g302680 vs. TAIR 10
Match: AT1G68280.1 (Thioesterase superfamily protein ) HSP 1 Score: 206.8 bits (525), Expect = 1.8e-53 Identity = 109/187 (58.29%), Postives = 131/187 (70.05%), Query Frame = 0
BLAST of Csor.00g302680 vs. TAIR 10
Match: AT1G35290.1 (Thioesterase superfamily protein ) HSP 1 Score: 206.8 bits (525), Expect = 1.8e-53 Identity = 110/189 (58.20%), Postives = 134/189 (70.90%), Query Frame = 0
BLAST of Csor.00g302680 vs. TAIR 10
Match: AT1G35250.1 (Thioesterase superfamily protein ) HSP 1 Score: 199.9 bits (507), Expect = 2.2e-51 Identity = 96/162 (59.26%), Postives = 121/162 (74.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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