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Csor.00g302570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGTTGAAGGAGTGGTACACTCAGTTTGCTTTCGTCAAGGTGGGGGATTGAAGGAAGGTTAAGGAATGTGATAGGTTGCAAAATACTGAAGCTTTAGTTGGTCGTTGGTGCGCCGTGCCTTATGTATTAACAAAGACCGATAGAAAGTGAAGTCTAAAGATGTAAGAAGAGAACATAGCTGTAAGACTCGCTGGTTTAGCAAGGTAGATGCTGGTTCGACATGTATTAATAAGCATGTGTTCTTCTTTGCTTTCACCTTTTAGTTTATGTATCCATAGAAGAGCCATCATTTGAGAAATCAGGCCTTCCTTAATCCCTCCAACTGACGGTCCTAATTTTGTTAGAATGTAATGTTACTTAAGAGGATTTAGCACCTCACTGGTTTTATTCAGGCATTGAACTGTACTGCAGGAGTTTCCTTGACCATGAACAGATTATAACGATTAGAAATGTATATGGAAAGCGTACAATACGCCCTGAACTTGGGTATCTATCTGTTCTTGGCTTAGTTTCTTCTCTTTCCCATATCAATAGAATTGCTTAATTGAGGGTCTGTTTGTTAAAGCTGTAGGCATCTTTTACTTGCCCATTTTTTGTCAGGTATGTGAAGATGAAAGAATGTGAAAGCAAGAGGATCCTTACTCGTAAGCAATGCTCAATGGCCAAGTGTTCTGTCCTGATCTGTAGTAATGGTAAGTGTACGGTAAGAAAGCCTCTAGTTTCTGCTTTACAGAGGGCAGGTGACCCACTAATGGAAACACAGCGTTGGCTTGCTTGCCTGGTGTTCATAGGACCTGTAACAAAGTTTCTGATTCCACCATACCAAGTAAGTTTTCTGAGCTACTGTTTAATGTCTATTAATTGTGAGCTAAATGGATGCTGCTGTTGTGTTGGAATATCTAGATTTGCTTTTGAGTGTTCGGTAAAAACTGTTTTCAATTTACCCTCCTGGTAAATGAATGATAAATTTGGATGGTTATATGTTTACAGGGTATTAAAACTAAATTGGAAAATGCTTGAAAATTAAAGACTAAACATACCTTTCGTACTGAATTAAAAAAACATAGTGAACTAGCTAGTCAATGACGGTGAGATTTCACATTGGTTGAAGAGGGGAATGTAGCAATCTTTATAAAGGTGTCGAAATCTCTCTTTGGTAGACGTGTTTTAGAACTGTGAGGTTGACGACAATATGTAATGGGTCAAAGTGGATGATGTCTACTAGCGGTGAATTTGGACTGTTACAAATGGTATTATAGCCTGACACTAGGCAATGTGTTAGCGAGGATGTTGGGCTCCTAAGAGGTGGATTGTGAGATCCCACATTAGTTGGAGAGGGGAACACCGGGTAGTGTACTCCAGGATGTTAACCCCCAAGGGGTGGATTGTGAGATCTCTTGTTGGTCGGAGAGGGGAACATAAAAACTTCTACCCAAGTAGACGCATTTTAAAATGGTGAGGCGGGTAGGGTTTGGAAGAAAACCTCCAAATTTAATTAAGTTTAGAAAAGAAAAATTGAATTTTGAGTATGGAAAAGAATTAAATTATAAAAAATTGCAATATTAATTGGAAATTTAATAGAGAAATAATAAGAGAAGCATGCCCACAAACAAGAATTCCTTGATAAATTCTCCATAAAACCCATTCCTTTCTTTCATCTTCTCCACTAAACCCATAAACTTTCCGGCAAGCAAACATTATAATGTCCGACTCCGGCGACCGTCCGAGGTTTCTGCATTCCATTTTTGGGCATGGCAAAGGTTCAGAATTAAAAGTTTAGAGTTCTGTTATAAAATATATCAATTTGATGTTGAATATAAGGGGTGTTTTGGATTTGAATGGCAGTGGCGGAGTTGATGCTGTGGAAGAAGAAGAGGGAATCGGCGGTGATGTTGGCCGGAATCAGCGGCGTTTGGTTGCTACTTGAGGTCTTGGACTACCACTTTGTCACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTTCTCTTCTCTTGGAACAAACTGGCTCTTCTCATCAACTGGTAAATCCAATTATTCTTCTTATTCTATTTTTATCTCTAAACTTTCAATTTTGTTCTTTAAATCTTCGATAAGTTTTCGTTGAAAATAAAGTTGTACAAAATTCACAAGAGAGAAGAACGAGCGCCGGTGAAGACGCTAAGCCTCAAAGGAGTGGATTGTGAGATCTCACGTCGGTTGGAGGAGGAAACAAAACATTTTTTTACTAGGATGTGAAAACCTCTCTTTAGTAGATGTTTTTTAAAATTTTAAGAGAGAGAGTTCGAAAGTAAAAGCTCAAAAAAGACAATATTTACTAGTGATGGTTGTTACACTAATTTTTAATGATTAAAGTGTTATGAAAATATTTTGTTAAAATTACCGAGTGAAATGGTAAAAACTAAATATAGGGTAAAAATTATTGATCATATGAATTTATTTTTATAATTAGGTTTTAAAAGTAAAATAATTTTGTTTGATTTAAATAATTGGATGAATTTGCAAAAATTGAACATGGGATAAAAATTGTAGAACTCGTATGAATTTATGGTAAAAATTGATACAGTAATTTTTTTTTTTATCTTATTGGTGACGTGGCTTGGCAGGGCTCCACCGAATGTGCATGATTTTGAGATCTCAAACGCCACTTTCACTCGTTTCTTTGATACAGTCAACTGGTTGGTCCACCACTTCTTTCAAGTTTCAACTGGCCAAAACTTTAAGCTATTTGCAATGGTACCCTTCCAAATCTCACTATTTAATTTATACCTATTTTTTTTTATTTTTAAACGCGAAAGTTGAAATGGTACCCTTCCAAATCTCACAGTCCACCCCTTTCGGGACCTAGCATTCTTGCTGGCACTCGCTCCTTTCTGTAATCGATGTGAGATTTCACAATCCATTCCCTTTGGGGGCCAGCATACTCGTTGGCACATCGTCTGGTGTCCACCTCTTGGAGACTCAACGTCGTCGCTGGCACACTGGCCTTTTGAGGCCCAGTGTCTAGCTCTAATCTTATTTGTAACAACCAAAGTCCACCATTAACATTATTTGTAACAGCCCAAGTCCACTATTAGCAGATATTGTCCTCTTTGGACTTTTCCTCAATATTTTTAAAACGCGTTTGCTAGGGGAGGTTTCCACACCTTCTAAAAAATGCTTCGTACTCCCTCTCCAACCGATGTATGATCTCACAATCCACCCTTCGCTGACACTCGTTCCCCTCTTCAATCAACGTGGGATCTCACACATAATCTTTATAAGATAGTAATGAATGCAACCCATTTTGCAGGTAATGGGTAGCATTTGGTTGGTATCACTCATTGGAGAGCTAACAAACTCATTGAATCTCATATACATTGGTTGGTATCACTCTCTTTCTCTCCCACTTTCTATTGAATATCTATGTCTGAAAAAGACTGTGACATTGTTGTTCTTAATATTGAGCAGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACCTTACACTCCAATTTTCTCACCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAG ATGCCTGTTGAAGGAGTGGTACACTCAGTTTGCTTTCGTCAAGGTGGGGGATTGAAGGAAGAGAACATAGCTGTAAGACTCGCTGGTTTAGCAAGGAGTTTCCTTGACCATGAACAGATTATAACGATTAGAAATGTATATGGAAAGCGTACAATACGCCCTGAACTTGGGTATGTGAAGATGAAAGAATGTGAAAGCAAGAGGATCCTTACTCGTAAGCAATGCTCAATGGCCAAGTGTTCTGTCCTGATCTGTAGTAATGCGTTGGCTTGCTTGCCTGGTGTTCATAGGACCTGTAACAAAGTTTCTGATTCCACCATACCAATGGCGGAGTTGATGCTGTGGAAGAAGAAGAGGGAATCGGCGGTGATGTTGGCCGGAATCAGCGGCGTTTGGTTGCTACTTGAGGTCTTGGACTACCACTTTGTCACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTTCTCTTCTCTTGGAACAAACTGGCTCTTCTCATCAACTGGGCTCCACCGAATGTGCATGATTTTGAGATCTCAAACGCCACTTTCACTCGTTTCTTTGATACAGTCAACTGGTTGGTCCACCACTTCTTTCAAGTTTCAACTGGCCAAAACTTTAAGCTATTTGCAATGGTAATGGGTAGCATTTGGTTGGTATCACTCATTGGAGAGCTAACAAACTCATTGAATCTCATATACATTGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACCTTACACTCCAATTTTCTCACCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAG ATGCCTGTTGAAGGAGTGGTACACTCAGTTTGCTTTCGTCAAGGTGGGGGATTGAAGGAAGAGAACATAGCTGTAAGACTCGCTGGTTTAGCAAGGAGTTTCCTTGACCATGAACAGATTATAACGATTAGAAATGTATATGGAAAGCGTACAATACGCCCTGAACTTGGGTATGTGAAGATGAAAGAATGTGAAAGCAAGAGGATCCTTACTCGTAAGCAATGCTCAATGGCCAAGTGTTCTGTCCTGATCTGTAGTAATGCGTTGGCTTGCTTGCCTGGTGTTCATAGGACCTGTAACAAAGTTTCTGATTCCACCATACCAATGGCGGAGTTGATGCTGTGGAAGAAGAAGAGGGAATCGGCGGTGATGTTGGCCGGAATCAGCGGCGTTTGGTTGCTACTTGAGGTCTTGGACTACCACTTTGTCACTCTGCTTTGCTATCTACTCATCATTACTATGCTTCTTCTCTTCTCTTGGAACAAACTGGCTCTTCTCATCAACTGGGCTCCACCGAATGTGCATGATTTTGAGATCTCAAACGCCACTTTCACTCGTTTCTTTGATACAGTCAACTGGTTGGTCCACCACTTCTTTCAAGTTTCAACTGGCCAAAACTTTAAGCTATTTGCAATGGTAATGGGTAGCATTTGGTTGGTATCACTCATTGGAGAGCTAACAAACTCATTGAATCTCATATACATTGTGTTTTTGAGCTTACAAACAGTTCCAATTGTGTTGGACAAGTACGAGGAGGAGATTCATAAGCTTGTCTCCAACCTCAAGTCTTCCATGGACACCTTCTTCCACACCTTACACTCCAATTTTCTCACCAAAATCCCAAGAAGGACCCATATCAAACAAACTTAG MPVEGVVHSVCFRQGGGLKEENIAVRLAGLARSFLDHEQIITIRNVYGKRTIRPELGYVKMKECESKRILTRKQCSMAKCSVLICSNALACLPGVHRTCNKVSDSTIPMAELMLWKKKRESAVMLAGISGVWLLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLINWAPPNVHDFEISNATFTRFFDTVNWLVHHFFQVSTGQNFKLFAMVMGSIWLVSLIGELTNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLTKIPRRTHIKQT Homology
BLAST of Csor.00g302570 vs. ExPASy Swiss-Prot
Match: A2RVT6 (Reticulon-like protein B14 OS=Arabidopsis thaliana OX=3702 GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 122.5 bits (306), Expect = 7.9e-27 Identity = 57/175 (32.57%), Postives = 109/175 (62.29%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy Swiss-Prot
Match: Q9LJQ5 (Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.5e-22 Identity = 54/180 (30.00%), Postives = 110/180 (61.11%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.5e-20 Identity = 50/176 (28.41%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.0e-19 Identity = 52/192 (27.08%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18 Identity = 52/193 (26.94%), Postives = 102/193 (52.85%), Query Frame = 0
BLAST of Csor.00g302570 vs. NCBI nr
Match: KAG6573940.1 (Reticulon-like protein B14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 570 bits (1468), Expect = 1.02e-204 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Csor.00g302570 vs. NCBI nr
Match: XP_022945840.1 (reticulon-like protein B14 isoform X3 [Cucurbita moschata]) HSP 1 Score: 423 bits (1088), Expect = 3.01e-147 Identity = 224/262 (85.50%), Postives = 227/262 (86.64%), Query Frame = 0
BLAST of Csor.00g302570 vs. NCBI nr
Match: KAG7013004.1 (Reticulon-like protein B9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 367 bits (943), Expect = 1.19e-124 Identity = 207/289 (71.63%), Postives = 219/289 (75.78%), Query Frame = 0
BLAST of Csor.00g302570 vs. NCBI nr
Match: XP_022968135.1 (reticulon-like protein B14 [Cucurbita maxima]) HSP 1 Score: 331 bits (848), Expect = 1.12e-111 Identity = 168/181 (92.82%), Postives = 173/181 (95.58%), Query Frame = 0
BLAST of Csor.00g302570 vs. NCBI nr
Match: KAA0034583.1 (reticulon-like protein B14 [Cucumis melo var. makuwa] >TYK09135.1 reticulon-like protein B14 [Cucumis melo var. makuwa]) HSP 1 Score: 231 bits (590), Expect = 1.70e-72 Identity = 115/182 (63.19%), Postives = 145/182 (79.67%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy TrEMBL
Match: A0A6J1G247 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449961 PE=4 SV=1) HSP 1 Score: 423 bits (1088), Expect = 1.46e-147 Identity = 224/262 (85.50%), Postives = 227/262 (86.64%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy TrEMBL
Match: A0A6J1HWC4 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467461 PE=4 SV=1) HSP 1 Score: 331 bits (848), Expect = 5.42e-112 Identity = 168/181 (92.82%), Postives = 173/181 (95.58%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy TrEMBL
Match: A0A5D3CCB1 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001260 PE=4 SV=1) HSP 1 Score: 231 bits (590), Expect = 8.24e-73 Identity = 115/182 (63.19%), Postives = 145/182 (79.67%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy TrEMBL
Match: A0A6J1DC54 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111018734 PE=4 SV=1) HSP 1 Score: 227 bits (578), Expect = 6.79e-71 Identity = 114/175 (65.14%), Postives = 139/175 (79.43%), Query Frame = 0
BLAST of Csor.00g302570 vs. ExPASy TrEMBL
Match: A0A5N6RF69 (Reticulon-like protein OS=Carpinus fangiana OX=176857 GN=FH972_015839 PE=4 SV=1) HSP 1 Score: 154 bits (388), Expect = 3.49e-42 Identity = 71/174 (40.80%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of Csor.00g302570 vs. TAIR 10
Match: AT3G18260.1 (Reticulon family protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23 Identity = 54/180 (30.00%), Postives = 110/180 (61.11%), Query Frame = 0
BLAST of Csor.00g302570 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 ) HSP 1 Score: 99.8 bits (247), Expect = 3.9e-21 Identity = 50/176 (28.41%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of Csor.00g302570 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein ) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-20 Identity = 52/192 (27.08%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of Csor.00g302570 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 ) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19 Identity = 52/193 (26.94%), Postives = 102/193 (52.85%), Query Frame = 0
BLAST of Csor.00g302570 vs. TAIR 10
Match: AT1G68230.2 (Reticulon family protein ) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-19 Identity = 42/128 (32.81%), Postives = 82/128 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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