Csor.00g302220 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g302220
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr18: 11087023 .. 11087723 (-)
RNA-Seq ExpressionCsor.00g302220
SyntenyCsor.00g302220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGAGGGGGTTTGGAATTGGAGCTTGTATTTAAGTCCCTTAATCTACACTTGGGATTAACAAGGAAGCTCATTAATGGCGGAAGAAGGGTGAGGAATCTGTTCTCTCTATTTCGCTCCCACTTTTTCCAAGAACGTCCATTATCCCACGACTAACCTTTCTCTTTCCCACCAACTTACTCTACTTTTACGGATTCACCATTCCCCAGCTTTCTCTCACCATTACAACTGGCTTTTTCCATTGCTTTAACTTAACTTCCTCTTCCGTATTCGGATTTCTGCCATTGCCACTCTCATTTACGCTTTCAGGTAACCTCTCTCTCTCTCTTCTTCGCCCTATTGCCTCTGTTTTTGATTCGGATAATTGATGAAGCAGGGTTTGAGCGGTAATTGTTAGTAGTGTTTCAATCTTCGCTGATTGTAATGTAGGTTTGTCTTGATACTACCTGATGCTGTTTGTTCTTCGATTTACTGAAAGAATACTGATTCCTGCTAATTAAAAACTGAGAGAGATTGCACAAAAACTTCCCGGAAATGAGGCAGCGACTCTGGATTTAGAGGGTTTTATGAAATAACAACGTAGTTGAACATCGATCTTTGAGTCTCATTTCTAATTTTAATTGAAATATCTGTAAGTTCAATGTTGAAGAAGTGGGTTCAATTTGTGTATGTTTTTGTTCTTGACAGTGTGGGTTTAA

mRNA sequence

ATGAACGGAGGGGGTTTGGAATTGGAGCTTGTATTTAAGTCCCTTAATCTACACTTGGGATTAACAAGGAAGCTCATTAATGGCGGAAGAAGGCTTTCTCTCACCATTACAACTGGCTTTTTCCATTGCTTTAACTTAACTTCCTCTTCCGTATTCGGATTTCTGCCATTGCCACTCTCATTTACGCTTTCAGTGTGGGTTTAA

Coding sequence (CDS)

ATGAACGGAGGGGGTTTGGAATTGGAGCTTGTATTTAAGTCCCTTAATCTACACTTGGGATTAACAAGGAAGCTCATTAATGGCGGAAGAAGGCTTTCTCTCACCATTACAACTGGCTTTTTCCATTGCTTTAACTTAACTTCCTCTTCCGTATTCGGATTTCTGCCATTGCCACTCTCATTTACGCTTTCAGTGTGGGTTTAA

Protein sequence

MNGGGLELELVFKSLNLHLGLTRKLINGGRRLSLTITTGFFHCFNLTSSSVFGFLPLPLSFTLSVWV
Homology
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BLAST of Csor.00g302220 vs. NCBI nr
Match: KAG6573905.1 (hypothetical protein SDJN03_27792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134 bits (336), Expect = 2.40e-39
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MNGGGLELELVFKSLNLHLGLTRKLINGGRRLSLTITTGFFHCFNLTSSSVFGFLPLPLS 60
          MNGGGLELELVFKSLNLHLGLTRKLINGGRRLSLTITTGFFHCFNLTSSSVFGFLPLPLS
Sbjct: 1  MNGGGLELELVFKSLNLHLGLTRKLINGGRRLSLTITTGFFHCFNLTSSSVFGFLPLPLS 60

Query: 61 FTLSVWV 67
          FTLSVWV
Sbjct: 61 FTLSVWV 67

The following BLAST results are available for this feature:
BLAST of Csor.00g302220 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g302220 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573905.12.40e-39100.00hypothetical protein SDJN03_27792, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g302220 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g302220 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g302220.m01Csor.00g302220.m01mRNA