Csor.00g302050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g302050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description40S ribosomal protein S25
LocationCsor_Chr18: 10983105 .. 10988064 (-)
RNA-Seq ExpressionCsor.00g302050
SyntenyCsor.00g302050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGGATGTAATACCTTCGGTGAAAGCAATACTTGAAGCACAAGACGATGTCTCGGACGTCGGATTACCGCTCCAAGATGACAGAGTTAGTTCTCCAATCCAAATACTCGTTCAGTAATTTACTCTTAACTTGGGCTCATTGAATTTGGATTGACAATGGCAGTTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTTGGGCTTTCTTCCCCAATGGCCTCTCAGGTACTTCAATTCTTTGAGAATGTAATTACTTTGTCGTTGTCATCACCTTTTTACCTCCTGGCTTCCAATGTCTTTTGTTAGATACAAAAATGATGAATGCAAGTATGAACAAATTATCAACAATCTGTCAATCAGTGATAATCTTTGATGCCAAAACCCGACCCATTGACCCGAAGAAAAAAAAAAAAAAAAAAAACCACATCAAAACTGAATGTCTAATCTTCTTCAATGATTGAATGATGATTAGGTCCAAAAGTGTGAGATCTTATATCGGTTGGAGAGGAGAACAAAACATTTCTTGTTAGGGTGTGGAGAACTTTCCCTAGTAGACGCGTGTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATCATCATGAGTTTATAATCAAAGAATACTCTCTATTGGGATGAGACCTTTTGGGGAAGCCCAAAGTAAAGCCATCAGAAGCTTATGCTCAAAGTGGACAATATCAGAGAGTCGTGTTTGTCTAATAACGTGTTTTAAAAATAGAAAGAATAGAAAGCCTACAGATCACAATATCTTGTACTTGGACCATTATAAATGGTATCAGAGCCAGACATCGAGCGGTGTGCCACTGGGGACACTAACTCCCAAGAGGGTCTAGAGATGACAATATTTTGTGCTTGAACCATTACAAATGGTATCAAAGCCAGACATCGAGCGGTGTGCCACTGGGGACGCTAACCCCCAAAAGGGTCTAAAGATGACAATATTTTGTGCTTGGACCATTACAAATGGTATCAGAGCCAGGCATCGAGCGGTGTGCCACTGGGGACGCTAACCCCCAAAAGGGTCTAAAGATGACAATATTTTGTGCTTGGACCATTACAAATGGTATCAGAGCCAGACATCGAGCGGTGTGCCACTGGGAACGCTAACCTCCAAAAGGGTCTAAAGATGACAATATTTTGTGCTTGGACCATTACAAATGGTATCAGAGCTAGACATCGAGTGGTGTGCCACTGGGGACGCTAACCCCCAAGAGAGTGGATTGTGAGATCCCATATCGGTTGAAGAGAAACGAAACATTCCTTATAATGGTGTGAAAATCTCTCCTAACAGACACAAATAAGATAACATTTGTTAGCGGTGTACTTTGATTGTTACAAAGACAATACTTAAGCGGTGAACTTGGACAGTTACAAAAAGGGGTTTCTTGCTCCTCCTATTGAGCCCTTTGTGGTTGATGAAAAGAAAATTACAGCTTGTTACTGTTTTGGATTGAGAAGCGTTTGGCTGCTCAAGGAATTATTCGAGTCTGGAGAGACTAATCAACACAGTGATTTCTTTTGTTTTTTTGGTGGGGAGCTTCTTCTCCCTTTTCTACTCTTTTGGAACTTGATCAAATCCTTAGTAGAATGTAAATTTCAGGATTTTTTTTTTCAATTACCATATTACGATTATTAATTTAATACCGAATTTAAGTTTTTTAAAAGTATTTACTTCTATTCTATCTATATTAATTAAATATATGTATAATTCTAATAGTCAGATTTAGGTATTTTAAATTTACTAGATTTTGTAATTATCTTTTAGTCGTTATTTTCTCAATAATTTTTAGAGTTTATATGAATCTATTTATTGTATACAAATCTAACACAAACATATATATATATATATATATATATATATATATATATGTGTAACGTTATAAAACCGTCAAATTCAACCGTGCAGTGAAAAAGTAATTTTAATATTGTTTTTATGGCTATTTTAGTGCACATATCTATAATAAAATTCTTTTATAATATTTTAAAATTCAACAATTTAATTAATAATATATATATATATATATATTTTTTATGTAACGTTATAAGACCGTCAAATTCAACCGTGTGGTGAAAAAGTAAATCAGTAAAATTATAAATCGACCACAGTGGGAGTCGAACCCACGACCTTTTGATCCGAAGTCAAACGCGCTAATCCACTGCGCTATGCGGTCATTTTGTGTTCAACGATCTTAAAAATAAAAATAGATTCTTTTTTTTTTTAAATTATAACTAAATAAGAAAAAGAAACTTTATCACATCGTAAAAGACTCGAAGTATATATTCGAGTCCACAATGTTTATTTTTATTTTTTTTAATTCGATTATTATATATTTTTTTATTGTTTCAATTTTTATTTTTCAAATTCTATTATTATTATTATTATTATTTATATATGCTAGTAGGAAAAGAAAAAAAAGCAAAAACGATTTCGTAGTAAATAAGATTACCCTTTTGAGATTTTGAAAAGAGTTGCCTACTAACCTGGTCCATGCACGTCGCTTTCTCCCGACTGATACCCTCCCTATTCTAGATCTTCCCATTTTTTCAAACATTCGTCTCTTTTCAACCGAGCACCAGTTCCTCACAGCTGACAAATAAGAATTTAGGCTGACTTCAACTATTTTTTATACCGGGCAGCAATTAATTAAACAAACACCCTTAGAGAATAAAATATGTATACACAATAAAACTTCAAATTTATTATAAATTTCGAGGAATTAAAATTTTATTTATCTTCACTAATTTTCTTTCTTCTCTTAATTTCTAAAAAAAAAAAAAAAAAAGCCAACTATAGAATTCGAACCTTTGATATAATAATTAAAAAATATATTTTTAACGAGTTAAATTCATATCGATAATAAAAATTAGAGACAAAAATATATATTATTTAGTCATAAGAGATACTTTAGCAATATTATTTTTTTTATATCACACATTACAATTATTTTAATCACATTTGTAGACTTAATAAATTCAATTATTTTGTTAAAGAGTTATAATCCAATCCATATTTGGCATCGTAAGCGTTACGGGCTTTACTCGTACGCTTTTTATGGGCCTTTCAGTGACGGGCCATTATGGAGGCCCAATATAATGGGCTTTGAAATGCACAATTGGGCCGATATCTTATCAGGCCCATTTACGTGAAGTTCCCAAACCCTAGCTCCACGAAGGCTGCGAAGGGTTTTATTTCTTTACCTATCAGCGCGCTATTCTAAGTTTGTTGTGTTTGCTCCCTCTCTTTTCTTCTGCGTCTTCTTCAACAGATCCAGCTCGGAACCCTACGGCGGCGGAACTTTGATACGATGGTTCGTAATCGGCTTTACTTTATTTTACTTGTTTCTGAATTCTCTCTTTAAGCGACGAAGGATTAGAAATAGGCGGGAAGTATGAAGCTATCTGTATTGATAATGTGTTTGACTGAACTTCTATTGTTCTTTGATTACCATTCTTTCATCGGAAGTCCGACAAGGAATGTTGTTTGTTATTTTTCTGTTTTGGTAGTCGTACTTGCATTTTGTTCTCTTACTTTGGTGGATTGTATGTGTTTAGGCGCCAAAGAAGGATAAAGCTCCTCCACCGTCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGGTAAGATTCTTGTTACAGTGTTTTCGACTTTACTTAAATCCATGGCTATATTATTGTAGTTGATCCTGGCTATTCCTTTAGCCGTTCTGTCTGCCGTGGATTATTGTTCAAGTTCTTGTGTGATTCTACGATGTGTTGTGGGAAAAATGTTTCTAATACTTGTACTAAATTCGAAAATGTTGTTTCGTTTCAAACTGTATGAGGAAAATGAGGAAACATCGAAATAAGAGGACATAATTTAGTACTGTGATTGCAGGAGAGAGTATCTCGTGTTGTTTATTGCTATCCTGTCAACTGTGAATGTTGATTCTAAATGCTAAGATTATGCAGTTTTCTCATCTATAATGCTGTTTTTCATTGTTAATATAACAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACCTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGACAGGTTGAGGGTAAGTTTTTCAACCTCGTCTCATCCATCATGTAGAACATGTTTCATGTTTTTGATTGGATTGCATATTCTATCACAATTATGTTATTCTAGTCAATTTGTGATGCTTCCTGATATGAACAAAATGAATGTTCATACATTTTCATTCAAAAATAGTTTGAATAATTAATTTGATCCATTGATTCTACCCAACTGCGTTTTTTCATTCATGAGTAAGAGAGTTTCAGTATAGTTTATTGAAACACTTCCCCTTCCCCCTACCCCTTCCCCTCTTCTCTGTTCTTCGTAGATTCTTGTTTTTCTGTAAATTTGCTCGTTGTGTATCTGGTTTTCTTTTTGTCTCAGAAAATCAATTGGGTTTTCTCCGAGTAAGAGGATAAATAAGTAATAGATTGCAATCCCTAATTCAAAAGTGTACCAAATATCTAATGATCTATAAATGCATAAGGGCCCAATTCTTTTTTGTCTATGAGGAAGAAAATTAGCATTAGATCTTAGGGTATGTTATGTTATTTTGAACATGTTGGTTGCAACCAACCACTATTCAACGTCATCGAGTTCTAACAAGATTCAAAACGTCCGTTGAGAGCGCATCATGAATATCATAACAGATTCAAACACTTGCCTTGAATCAACACAATTTGTTATTTGACAAATGATTCTCTGCCATTTCAATTTTCAGATCAATGGATCGCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTGTCTTCACATTCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAA

mRNA sequence

ATGGTGGAGGATGTAATACCTTCGGTGAAAGCAATACTTGAAGCACAAGACGATGTCTCGGACGTCGGATTACCGCTCCAAGATGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTTGGGCTTTCTTCCCCAATGGCCTCTCAGAGTTATAATCCAATCCATATTTGGCATCATCCAGCTCGGAACCCTACGGCGGCGGAACTTTGATACGATGGCGCCAAAGAAGGATAAAGCTCCTCCACCGTCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACCTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGACAGGTTGAGGATCAATGGATCGCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTGTCTTCACATTCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAA

Coding sequence (CDS)

ATGGTGGAGGATGTAATACCTTCGGTGAAAGCAATACTTGAAGCACAAGACGATGTCTCGGACGTCGGATTACCGCTCCAAGATGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTTGGGCTTTCTTCCCCAATGGCCTCTCAGAGTTATAATCCAATCCATATTTGGCATCATCCAGCTCGGAACCCTACGGCGGCGGAACTTTGATACGATGGCGCCAAAGAAGGATAAAGCTCCTCCACCGTCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACCTATGACAAGCTTCTCGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGACAGGTTGAGGATCAATGGATCGCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTGTCTTCACATTCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAA

Protein sequence

MVEDVIPSVKAILEAQDDVSDVGLPLQDDRLDGSFLKNGVPYLGFLPQWPLRVIIQSIFGIIQLGTLRRRNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT
Homology
[Close]
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVS+HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-46
Identity = 94/108 (87.04%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV++HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-45
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATN 182
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVS+HSSQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.1e-45
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPS+LSDRLRI+GSLAR+AI+DLMARG IRMVS+H+SQ+IYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRAT 181
           +TPSILSDRLRINGSLAR+AI+DLM +G IRMVS+HSSQ+I TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]
BLAST of Csor.00g302050 vs. NCBI nr
Match: KAG6573888.1 (40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353 bits (905), Expect = 1.87e-122
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 1   MVEDVIPSVKAILEAQDDVSDVGLPLQDDRLDGSFLKNGVPYLGFLPQWPLRVIIQSIFG 60
           MVEDVIPSVKAILEAQDDVSDVGLPLQDDRLDGSFLKNGVPYLGFLPQWPLRVIIQSIFG
Sbjct: 1   MVEDVIPSVKAILEAQDDVSDVGLPLQDDRLDGSFLKNGVPYLGFLPQWPLRVIIQSIFG 60

Query: 61  IIQLGTLRRRNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG 120
           IIQLGTLRRRNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG
Sbjct: 61  IIQLGTLRRRNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG 120

Query: 121 TYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRAT 180
           TYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRAT
Sbjct: 121 TYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRAT 180

Query: 181 NT 182
           NT
Sbjct: 181 NT 182

[Close]
BLAST of Csor.00g302050 vs. NCBI nr
Match: XP_022945101.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S ribosomal protein S25-2 [Cucurbita maxima] >XP_023541368.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG7012952.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206 bits (524), Expect = 1.76e-65
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. NCBI nr
Match: XP_016900931.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S ribosomal protein S25-2 [Benincasa hispida] >TYK10188.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (518), Expect = 1.44e-64
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. NCBI nr
Match: XP_022961406.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S ribosomal protein S25-2-like [Cucurbita maxima] >XP_023545343.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG6590412.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023962.1 40S ribosomal protein S25-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203 bits (517), Expect = 2.05e-64
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. NCBI nr
Match: XP_022150617.1 (40S ribosomal protein S25-2-like [Momordica charantia])

HSP 1 Score: 202 bits (515), Expect = 4.12e-64
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match: A0A6J1HZE7 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467614 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 8.51e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match: A0A6J1FZX1 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111449439 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 8.51e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match: A0A5D3CG38 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003330 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 6.97e-65
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match: A0A1S4DY71 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103492227 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 6.97e-65
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match: A0A6J1HUK6 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1)

HSP 1 Score: 203 bits (517), Expect = 9.90e-65
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 191.0 bits (484), Expect = 8.1e-49
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVS+HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 186.4 bits (472), Expect = 2.0e-47
Identity = 94/108 (87.04%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV++HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Csor.00g302050 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.5e-47
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVS+HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]
BLAST of Csor.00g302050 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATN 182
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVS+HSSQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Csor.00g302050 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 183
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV++HSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:
BLAST of Csor.00g302050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIK21.1e-4789.8140S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1[more]
Q9T0292.8e-4687.0440S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1[more]
Q8GYL53.1e-4587.8540S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2[more]
P463019.1e-4586.1140S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1[more]
Q9SIW51.3e-4385.8540S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3[more]
BLAST of Csor.00g302050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573888.11.87e-122100.0040S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022945101.11.76e-65100.0040S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S riboso... [more]
XP_016900931.11.44e-6498.15PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S r... [more]
XP_022961406.12.05e-6498.1540S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S riboso... [more]
XP_022150617.14.12e-6497.2240S ribosomal protein S25-2-like [Momordica charantia][more]
BLAST of Csor.00g302050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HZE78.51e-66100.0040S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467614 PE=3 SV=1[more]
A0A6J1FZX18.51e-66100.0040S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111449439 PE=3 SV=... [more]
A0A5D3CG386.97e-6598.1540S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S4DY716.97e-6598.1540S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103492227 PE=3 SV=1[more]
A0A6J1HUK69.90e-6598.1540S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1[more]
BLAST of Csor.00g302050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21580.18.1e-4989.81Ribosomal protein S25 family protein [more]
AT4G39200.12.0e-4787.04Ribosomal protein S25 family protein [more]
AT2G21580.24.5e-4788.89Ribosomal protein S25 family protein [more]
AT4G34555.12.2e-4687.85Ribosomal protein S25 family protein [more]
AT4G39200.21.1e-4586.11Ribosomal protein S25 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 82..179
e-value: 8.5E-42
score: 141.5
IPR004977Ribosomal protein S25PANTHERPTHR1285040S RIBOSOMAL PROTEIN S25coord: 55..182
NoneNo IPR availableGENE3D3.30.63.20coord: 95..182
e-value: 2.1E-40
score: 138.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..107
NoneNo IPR availablePANTHERPTHR12850:SF31BNAA04G12260D PROTEINcoord: 55..182

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g302050.m01Csor.00g302050.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome