Csor.00g301920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g301920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB6-interacting golgin
Location	Csor_Chr18: 10909350 .. 10911310 (-)
RNA-Seq Expression	Csor.00g301920
Synteny	Csor.00g301920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGGGGTCGAGACGATGGCGGTGAGATGGGGAAGAAACTGACCGTGTCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTTAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAACAAGCCAAACGCTTAGCACAAATTTGGGAAGTAAGTTTTATAATCATATGCTTTTTATGTAACACGCCCATAAAGGATCCAAGTTTGGTTCCCTTGGTAGTACAATTCTAATGTAAAATCTTATTTATTTAGGCTAAATTAATAAAAATATTCCCGATCTATATATATATAAATACTTTTCAACTTAAAAAAAGTCTCAATCATACCTTTAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAATCATTAGTTAGGATTAATATTTTATTTCATATATAGGGTTCGATACTTTTAAAAGTGTTTAAAAAACATTTTTGAACTTTATTATTATTATTATTATTATTTTGTTAATACCCTTGAACTATTTTAAAAACTTCAAAATATCTTTTATTTTATTTTTTTTATAAAGTTAAAAAATATTGTTAGAGTTGATACACGTTCAAAAAATTTTTTTTTTTTAAAAGTATTTTTTAATTAAAAAAATAAAATTAAATAGTATTTCTTTTTAGACCCTTTCAAAGTTTAAAGATATTTTTAAAACAAAATATTTAAAATTATAATTTCTGTATAAAGATAATGAAAACCATATTTTTTAAACTTATTTAAAGATCAAACGTATTATTGAAGAAAGTTTATCAATATTATTTTAGTTTAAAGGTAGTTTTAAATTAATTTAACAGAAAATTTTAATAATAAAAAAAAAAAATCGGAATTCAAAGATTGAACAAAAAAAAGTTGACCTAGAATGTTGTTGCGTATGATTAAGGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCCAAGAAGGAACTGAAATCACTGGGACAGATCTGCCAAAAGAAGGTGCTTCAATCTCAATAATTTTTTTTTTTTTTTTTTAATATTTTGTTTTATGTTGGAACTTCTAACCTCTAATTTTATAAAGTAAGTTTCAGTTAAAAAAATATTTGTTCTAAATGGTAACAGGAAAAAGAATATAAAGAAGTCTTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGGTAATAATAATTTTTTACCCCAACTCTAAATTTTCCATTCCTTTTCGGTTTAATTTTCTTTAATTCAAATAATTCTTATTAAATAATAAACTTAATTCAATGCTCGACTCATTTATTTAAATTTTTATTTTTAATAAAAGCATAACATTCATATATAAAATACCTATTTATTTACTTTTCAAACTAAATTGCAATATATATTTTTAAAAAATACATTTCAAAAACATAAAAGTTATTTTAAAAGCTATTGAATAATAAAATAATCGAAGAACATTCCTGAAATTAAATAAAATCATAATAAATATATTGGTATATAAATATATCATAAGTAAAAAAGTTTTTTTATTTTTATTTTTATTTTTTGAAGTTAACAATAATTATTAATTTGTTTCAATCTAAACTGATTTAAGTGAAACCCACAGCTAACTCAACTCATAAAAATTTGCATTTATTTAAACTAAATCAAACCTAAATAAATTATAACTCAATCCAAAACGTACCGATTAGGTTGGATTGATCACGTTCTTCCCTTTAAATCGCACCAAGGGGCTAATATTCTATTAAATTATCCAATTGCCATTTGTAAATGGCCATAATGTTATCAGCTGCTGGATCAAAGTGAGAGATGGAGGATGAACAAGCTTGAAGAATTGAGTAAGCACATAGCATTGACAAACTGA

mRNA sequence

ATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGGGGTCGAGACGATGGCGGTGAGATGGGGAAGAAACTGACCGTGTCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTTAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAACAAGCCAAACGCTTAGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCCAAGAAGGAACTGAAATCACTGGGACAGATCTGCCAAAAGAAGGAAAAAGAATATAAAGAAGTCTTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGCTGCTGGATCAAAGTGAGAGATGGAGGATGAACAAGCTTGAAGAATTGAGTAAGCACATAGCATTGACAAACTGA

Coding sequence (CDS)

ATGACGAGTAAGCACGGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGGGGTCGAGACGATGGCGGTGAGATGGGGAAGAAACTGACCGTGTCGACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTTAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAACAAGCCAAACGCTTAGCACAAATTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAGGTTGGTAATGTGAGAAAAAGAATAGACACAGCCAAGAAGGAACTGAAATCACTGGGACAGATCTGCCAAAAGAAGGAAAAAGAATATAAAGAAGTCTTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTAATGGAGCTGCTGGATCAAAGTGAGAGATGGAGGATGAACAAGCTTGAAGAATTGAGTAAGCACATAGCATTGACAAACTGA

Protein sequence

MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

Homology

[Close]

BLAST of Csor.00g301920 vs. NCBI nr
Match: KAG6573875.1 (hypothetical protein SDJN03_27762, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (759), Expect = 7.51e-101
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of Csor.00g301920 vs. NCBI nr
Match: XP_022945697.1 (uncharacterized protein LOC111449848 isoform X1 [Cucurbita moschata])

HSP 1 Score: 292 bits (748), Expect = 3.57e-99
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of Csor.00g301920 vs. NCBI nr
Match: XP_023542304.1 (uncharacterized protein LOC111802239 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291 bits (744), Expect = 1.45e-98
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQ REEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQGREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLL TLMELLDQSERWRMNKLEELSKH+ALTN
Sbjct: 121 IFNEKTNEKAQLLATLMELLDQSERWRMNKLEELSKHMALTN 162

[Close]

BLAST of Csor.00g301920 vs. NCBI nr
Match: XP_022968566.1 (uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima])

HSP 1 Score: 289 bits (739), Expect = 8.42e-98
Identity = 157/162 (96.91%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of Csor.00g301920 vs. NCBI nr
Match: XP_022945698.1 (uncharacterized protein LOC111449848 isoform X2 [Cucurbita moschata])

HSP 1 Score: 246 bits (627), Expect = 8.06e-81
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 139
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL
Match: A0A6J1G1N1 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1)

HSP 1 Score: 292 bits (748), Expect = 1.73e-99
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162

[Close]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL
Match: A0A6J1HV92 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 4.07e-98
Identity = 157/162 (96.91%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
           IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Sbjct: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELNKHIALTN 162

[Close]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL
Match: A0A6J1G1M5 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1)

HSP 1 Score: 246 bits (627), Expect = 3.90e-81
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 139
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL
Match: A0A6J1HTV1 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1)

HSP 1 Score: 243 bits (621), Expect = 3.09e-80
Identity = 134/139 (96.40%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKHGDEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHGDEGNGERIVSEGSRGRDEDGEMGKRLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120

Query: 121 IFNEKTNEKAQLLTTLMEL 139
           IFNEKTNEKAQLLTTLME+
Sbjct: 121 IFNEKTNEKAQLLTTLMEV 139

[Close]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL
Match: A0A6J1G1P6 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1)

HSP 1 Score: 231 bits (588), Expect = 1.69e-75
Identity = 133/162 (82.10%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 1   MTSKHGDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60
           MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS
Sbjct: 1   MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLS 60

Query: 61  RAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLE 120
           RAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKK         
Sbjct: 61  RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKK--------- 120

Query: 121 IFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN 162
                             LLDQSERWRMNKLEELSKHIALTN
Sbjct: 121 ------------------LLDQSERWRMNKLEELSKHIALTN 135

[Close]

BLAST of Csor.00g301920 vs. TAIR 10
Match: AT3G52900.1 (Family of unknown function (DUF662) )

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 80/128 (62.50%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 31  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWEELEVMGDPMGKEVGNV 90
           K+ V+  QAREEEIER+KM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG V
Sbjct: 33  KVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLTQTLEELEIMGDPMRKEVGMV 92

Query: 91  RKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNK 150
           RK+ID A +++KSL Q CQKKEKEYK+ LE FNEK  EKA L++ LMELL +SER R+ K
Sbjct: 93  RKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEKNKEKAHLVSMLMELLAESERLRIKK 152

Query: 151 LEELSKHI 159
           LEE++K +
Sbjct: 153 LEEINKTV 160

[Close]

BLAST of Csor.00g301920 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 142.1 bits (357), Expect = 3.9e-34
Identity = 78/128 (60.94%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 31  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWEELEVMGDPMGKEVGNV 90
           +  +S  +A+EEEIE++KME++E+V+ QL R EE+ KRLA I EELE + DPM KEV  V
Sbjct: 47  RTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVAMV 106

Query: 91  RKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNK 150
           RK+ID+  KELK LG   QKKE+EYKE LE FNEK  EK QL+T LMEL+ +SE+ RM K
Sbjct: 107 RKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESEKMRMKK 166

Query: 151 LEELSKHI 159
           LEELSK+I
Sbjct: 167 LEELSKNI 174

[Close]

BLAST of Csor.00g301920 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 75/125 (60.00%), Postives = 96/125 (76.80%), Query Frame = 0


Query: 34  VSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKR 93
           +S  +A+E+EIE+R+MEV+E+++ QL R E++ KRL+ I EELE M DPM KEV  VRK+
Sbjct: 65  LSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKK 124

Query: 94  IDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEE 153
           ID+  KELK LG   QKKE+EYKE L+ FNEK  EK QL+T LMEL+ +SE+ RM KLEE
Sbjct: 125 IDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEE 184

Query: 154 LSKHI 159
           LSK I
Sbjct: 185 LSKSI 189

[Close]

BLAST of Csor.00g301920 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 134.4 bits (337), Expect = 8.0e-32
Identity = 79/144 (54.86%), Postives = 104/144 (72.22%), Query Frame = 0


Query: 15  VSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWE 74
           +S  S+   +  EM +   +S  +A+E+EIE+RKMEV+E+V+ QL R EE+ +RLA I E
Sbjct: 18  LSFSSQMSKEDEEMARS-ALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIRE 77

Query: 75  ELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLT 134
           ELE M DPM KEV  VRK+ID+  KELK LG   QKKE+EYKE L+ FNEK  EK QL+T
Sbjct: 78  ELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLIT 137

Query: 135 TLMELLDQSERWRMNKLEELSKHI 159
            LMEL+ +SE+ R+ KL+ELS+ I
Sbjct: 138 KLMELVGESEKLRLKKLDELSRSI 160

[Close]

BLAST of Csor.00g301920 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 132.5 bits (332), Expect = 3.1e-31
Identity = 74/125 (59.20%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 34  VSTLQAREEEIERRKMEVKEKVELQLSRAEEQAKRLAQIWEELEVMGDPMGKEVGNVRKR 93
           +S  +A+E+EIE+R+MEV+E+++ QL R E++ KRL+ I EELE M DPM KEV  VRK+
Sbjct: 65  LSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKK 124

Query: 94  IDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEE 153
           ID+  KELK LG   QKK  EYKE L+ FNEK  EK QL+T LMEL+ +SE+ RM KLEE
Sbjct: 125 IDSVNKELKPLGSTVQKKVMEYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEE 184

Query: 154 LSKHI 159
           LSK I
Sbjct: 185 LSKSI 189

The following BLAST results are available for this feature:

BLAST of Csor.00g301920 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g301920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573875.1	7.51e-101	100.00	hypothetical protein SDJN03_27762, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022945697.1	3.57e-99	98.77	uncharacterized protein LOC111449848 isoform X1 [Cucurbita moschata]	[more]
XP_023542304.1	1.45e-98	97.53	uncharacterized protein LOC111802239 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022968566.1	8.42e-98	96.91	uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima]	[more]
XP_022945698.1	8.06e-81	97.84	uncharacterized protein LOC111449848 isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g301920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1N1	1.73e-99	98.77	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1	[more]
A0A6J1HV92	4.07e-98	96.91	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1	[more]
A0A6J1G1M5	3.90e-81	97.84	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1	[more]
A0A6J1HTV1	3.09e-80	96.40	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111467754 PE=3 SV=1	[more]
A0A6J1G1P6	1.69e-75	82.10	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449848 PE=3 SV=1	[more]

BLAST of Csor.00g301920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52900.1	1.3e-34	62.50	Family of unknown function (DUF662)	[more]
AT3G09980.1	3.9e-34	60.94	Family of unknown function (DUF662)	[more]
AT2G36410.2	2.1e-32	60.00	Family of unknown function (DUF662)	[more]
AT3G52920.2	8.0e-32	54.86	Family of unknown function (DUF662)	[more]
AT2G36410.3	3.1e-31	59.20	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..128
None	No IPR available	COILS	Coil	Coil	coord: 34..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR21470:SF3	RAB6-INTERACTING GOLGIN (DUF662)	coord: 23..158
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 21..158 e-value: 7.4E-60 score: 201.3
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 23..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g301920.m01	Csor.00g301920.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus