Csor.00g300640 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g300640
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr18: 9926711 .. 9927195 (-)
RNA-Seq ExpressionCsor.00g300640
SyntenyCsor.00g300640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGTTTTGGGCTCGTAGGCCCACGTATAAGAGGGGTTTGGGCTTGATTATTGATTCTGGACTGGGCTTTGTAGGCCCATGCATAATAGTGGGTTGGGCTTTGTAGGCCCATACATAATTGGTTATCTTTGAGTTGATCGGTGGCTAGATCGGCGAACGGCGGTCGTAAAATTCAATTTTCTGAGTATTTCCGTCGATCACAAGCCATTGCCGGTTTCTCCTCTTTCTTTAGTCGGCGTTCTTTCTGATCGTTATGAGTGTGAAATTTATCTCGTCGGTTACCTTGCTGTAACATTTGGAGAGCATATTTTCATCCGAGGTTAGGGATTCCCTTGTGTGTAAAAGCATCTGAGTGTGATTTTATCAGTTTAGGTTTATATTTGTATGTTCCTAGCTCTGGATATTGAAATTCTGAAATTTAGCTATTCTTCAACTTGGTGCTGAATTGATTACGACCAAGACAACCAGGAAGGCTTTATAA

mRNA sequence

ATGGTTGGTTTTGGGCTCGTAGGCCCACATCGGCGAACGGCGGTCGTAAAATTCAATTTTCTGAGTATTTCCGTCGATCACAAGCCATTGCCGGTTTCTCCTCTTTCTTTAGTCGGCGTTCTTTCTGATCGTTATGAGTGTGAAATTTATCTCGTCGGTTACCTTGCTGTAACATTTGGAGAGCATATTTTCATCCGAGCTATTCTTCAACTTGGTGCTGAATTGATTACGACCAAGACAACCAGGAAGGCTTTATAA

Coding sequence (CDS)

ATGGTTGGTTTTGGGCTCGTAGGCCCACATCGGCGAACGGCGGTCGTAAAATTCAATTTTCTGAGTATTTCCGTCGATCACAAGCCATTGCCGGTTTCTCCTCTTTCTTTAGTCGGCGTTCTTTCTGATCGTTATGAGTGTGAAATTTATCTCGTCGGTTACCTTGCTGTAACATTTGGAGAGCATATTTTCATCCGAGCTATTCTTCAACTTGGTGCTGAATTGATTACGACCAAGACAACCAGGAAGGCTTTATAA

Protein sequence

MVGFGLVGPHRRTAVVKFNFLSISVDHKPLPVSPLSLVGVLSDRYECEIYLVGYLAVTFGEHIFIRAILQLGAELITTKTTRKAL
Homology
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BLAST of Csor.00g300640 vs. NCBI nr
Match: KAG6573748.1 (hypothetical protein SDJN03_27635, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (427), Expect = 1.11e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MVGFGLVGPHRRTAVVKFNFLSISVDHKPLPVSPLSLVGVLSDRYECEIYLVGYLAVTFG 60
          MVGFGLVGPHRRTAVVKFNFLSISVDHKPLPVSPLSLVGVLSDRYECEIYLVGYLAVTFG
Sbjct: 1  MVGFGLVGPHRRTAVVKFNFLSISVDHKPLPVSPLSLVGVLSDRYECEIYLVGYLAVTFG 60

Query: 61 EHIFIRAILQLGAELITTKTTRKAL 85
          EHIFIRAILQLGAELITTKTTRKAL
Sbjct: 61 EHIFIRAILQLGAELITTKTTRKAL 85

The following BLAST results are available for this feature:
BLAST of Csor.00g300640 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g300640 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573748.11.11e-52100.00hypothetical protein SDJN03_27635, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g300640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g300640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g300640.m01Csor.00g300640.m01mRNA