Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGTAAGATATTGATGAACTTTGCTCTAACAATATGCTTCTTTTGTTGTTGTAGCTCGGGCAGAGTGATTGAATCTCCACATTATAATGTGATTCATGTGGAGGCAGAATTTGAGATTAGACAGTATAAACAGGTCTCATGGATATCAGCTCTTGTCCAAGGAACAGCCTCCTTTGAGAAGTCCACCCAGCAAGGCTTCCACAGGTATAAGTTGCTATTTTCTGTTTGGTTGCCAAGAAAATTCCACCAAGAAAATGTGGTGGGATTTTCCTTCTGATTTGAACTAATAATCTCTTGTATTGGTTGGCATCAGATTGTATCAATACATTCATGGTGCTAATAGCAACTCTTCTCACTTTCTTATCACTTCTCCTGTCACGACGACCATTATGGCATCGACGCGTGGCCCCGAGCGCTTGGTTAGGTATTATCTTCCTTCTATGTATACCGAAAACCCACCGCTGCCCAATTCTGAACTCGATGTTCAGTTTGAGAAGTGGAGAAGCAATTGCTTAGCAGTTGGGAGGTTTTCTGGGTTTGCCAAAGATGATAACATCAATAAAGAAGTTGAAGCTCTAAAGAGCAGCTTGAACAAGTACCTACCTAAGAGTTCAGCCATTTCAGAATACACCGTTGCTCAGTATAATTCGTCACGTCACCTGTCGGGTCGTTTGAACGAAGTCTGGCTCGACGTTTCAGCTGTTACATCAGAGGGCTGTCAACGCCGGTAA
mRNA sequence
ATGAACGAATTTGAGATTAGACAGTATAAACAGGTCTCATGGATATCAGCTCTTGTCCAAGGAACAGCCTCCTTTGAGAAGTCCACCCAGCAAGGCTTCCACAGATTGTATCAATACATTCATGGTGCTAATAGCAACTCTTCTCACTTTCTTATCACTTCTCCTGTCACGACGACCATTATGGCATCGACGCGTGGCCCCGAGCGCTTGGTTAGGTATTATCTTCCTTCTATGTATACCGAAAACCCACCGCTGCCCAATTCTGAACTCGATGTTCAGTTTGAGAAGTGGAGAAGCAATTGCTTAGCAGTTGGGAGGTTTTCTGGGTTTGCCAAAGATGATAACATCAATAAAGAAGTTGAAGCTCTAAAGAGCAGCTTGAACAAGTACCTACCTAAGAGTTCAGCCATTTCAGAATACACCGTTGCTCAGTATAATTCGTCACGTCACCTGTCGGGTCGTTTGAACGAAGTCTGGCTCGACGTTTCAGCTGTTACATCAGAGGGCTGTCAACGCCGGTAA
Coding sequence (CDS)
ATGAACGAATTTGAGATTAGACAGTATAAACAGGTCTCATGGATATCAGCTCTTGTCCAAGGAACAGCCTCCTTTGAGAAGTCCACCCAGCAAGGCTTCCACAGATTGTATCAATACATTCATGGTGCTAATAGCAACTCTTCTCACTTTCTTATCACTTCTCCTGTCACGACGACCATTATGGCATCGACGCGTGGCCCCGAGCGCTTGGTTAGGTATTATCTTCCTTCTATGTATACCGAAAACCCACCGCTGCCCAATTCTGAACTCGATGTTCAGTTTGAGAAGTGGAGAAGCAATTGCTTAGCAGTTGGGAGGTTTTCTGGGTTTGCCAAAGATGATAACATCAATAAAGAAGTTGAAGCTCTAAAGAGCAGCTTGAACAAGTACCTACCTAAGAGTTCAGCCATTTCAGAATACACCGTTGCTCAGTATAATTCGTCACGTCACCTGTCGGGTCGTTTGAACGAAGTCTGGCTCGACGTTTCAGCTGTTACATCAGAGGGCTGTCAACGCCGGTAA
Protein sequence
MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR
Homology
BLAST of Csor.00g300390 vs. NCBI nr
Match:
KAG6573723.1 (Heme-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 351 bits (900), Expect = 5.44e-122
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI 60
MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI
Sbjct: 1 MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI 60
Query: 61 MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEV 120
MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEV
Sbjct: 61 MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEV 120
Query: 121 EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR
Sbjct: 121 EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
BLAST of Csor.00g300390 vs. NCBI nr
Match:
KAG7012796.1 (Heme-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 346 bits (887), Expect = 5.05e-120
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0
Query: 1 MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI 60
MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI
Sbjct: 1 MNEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTI 60
Query: 61 MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEV 120
MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAV RFSGFAKDDNINKEV
Sbjct: 61 MASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVRRFSGFAKDDNINKEV 120
Query: 121 EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQR 172
EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQR
Sbjct: 121 EALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQR 172
BLAST of Csor.00g300390 vs. NCBI nr
Match:
XP_023542916.1 (heme-binding protein 2-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 342 bits (876), Expect = 8.52e-118
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0
Query: 3 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 62
EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA
Sbjct: 38 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 97
Query: 63 STRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEA 122
STRGPERLVRYYLPSMYTENPPLPNSEL+VQFEKWRSNCLAV RFSGFAKDDNINKEVEA
Sbjct: 98 STRGPERLVRYYLPSMYTENPPLPNSELNVQFEKWRSNCLAVRRFSGFAKDDNINKEVEA 157
Query: 123 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR
Sbjct: 158 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 208
BLAST of Csor.00g300390 vs. NCBI nr
Match:
XP_022944900.1 (heme-binding protein 2-like [Cucurbita moschata])
HSP 1 Score: 338 bits (867), Expect = 1.94e-116
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 3 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 62
EFEIRQYKQVSW+SALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA
Sbjct: 37 EFEIRQYKQVSWVSALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 96
Query: 63 STRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEA 122
STRGPERLVRYYLPSMYTENPPLPNSEL+VQFEKWRSNCLAV RFSGFAKDDNINKEVEA
Sbjct: 97 STRGPERLVRYYLPSMYTENPPLPNSELNVQFEKWRSNCLAVRRFSGFAKDDNINKEVEA 156
Query: 123 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
LKSSL KYLPKSSAISEYTVAQYNSSRHLSGRLNEVW+DVSAVTSEGCQRR
Sbjct: 157 LKSSLTKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWIDVSAVTSEGCQRR 207
BLAST of Csor.00g300390 vs. NCBI nr
Match:
XP_022967039.1 (heme-binding protein 2-like [Cucurbita maxima])
HSP 1 Score: 337 bits (865), Expect = 4.05e-116
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0
Query: 3 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 62
EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGAN NSSHFLITSPVTTTIMA
Sbjct: 38 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANINSSHFLITSPVTTTIMA 97
Query: 63 STRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEA 122
ST GPERLVRYYLPSMYTENPPLPNSEL+VQFEKWRSNCLAV RFSGFAKDDNINKEVEA
Sbjct: 98 STHGPERLVRYYLPSMYTENPPLPNSELNVQFEKWRSNCLAVRRFSGFAKDDNINKEVEA 157
Query: 123 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR
Sbjct: 158 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 208
BLAST of Csor.00g300390 vs. ExPASy TrEMBL
Match:
A0A6J1FZD2 (heme-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111449291 PE=3 SV=1)
HSP 1 Score: 338 bits (867), Expect = 9.38e-117
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 3 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 62
EFEIRQYKQVSW+SALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA
Sbjct: 37 EFEIRQYKQVSWVSALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 96
Query: 63 STRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEA 122
STRGPERLVRYYLPSMYTENPPLPNSEL+VQFEKWRSNCLAV RFSGFAKDDNINKEVEA
Sbjct: 97 STRGPERLVRYYLPSMYTENPPLPNSELNVQFEKWRSNCLAVRRFSGFAKDDNINKEVEA 156
Query: 123 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
LKSSL KYLPKSSAISEYTVAQYNSSRHLSGRLNEVW+DVSAVTSEGCQRR
Sbjct: 157 LKSSLTKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWIDVSAVTSEGCQRR 207
BLAST of Csor.00g300390 vs. ExPASy TrEMBL
Match:
A0A6J1HVL2 (heme-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466562 PE=3 SV=1)
HSP 1 Score: 337 bits (865), Expect = 1.96e-116
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0
Query: 3 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIMA 62
EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGAN NSSHFLITSPVTTTIMA
Sbjct: 38 EFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANINSSHFLITSPVTTTIMA 97
Query: 63 STRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVEA 122
ST GPERLVRYYLPSMYTENPPLPNSEL+VQFEKWRSNCLAV RFSGFAKDDNINKEVEA
Sbjct: 98 STHGPERLVRYYLPSMYTENPPLPNSELNVQFEKWRSNCLAVRRFSGFAKDDNINKEVEA 157
Query: 123 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 173
LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR
Sbjct: 158 LKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQRR 208
BLAST of Csor.00g300390 vs. ExPASy TrEMBL
Match:
A0A0A0KVJ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599820 PE=3 SV=1)
HSP 1 Score: 293 bits (749), Expect = 9.27e-99
Identity = 139/170 (81.76%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 2 NEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIM 61
++FEIRQYKQ+SW+SALVQGTASFEKST+QGFHRLYQY+HGANSNS HFL TSPVTTTIM
Sbjct: 37 SDFEIRQYKQISWMSALVQGTASFEKSTEQGFHRLYQYMHGANSNSYHFLFTSPVTTTIM 96
Query: 62 ASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVE 121
TR PERLVRYYLP M ENPPLPNSEL+V FEKWR+NCLAV RF GFAKDDNINKE++
Sbjct: 97 TLTREPERLVRYYLPIMNAENPPLPNSELNVHFEKWRNNCLAVRRFPGFAKDDNINKEID 156
Query: 122 ALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQ 171
ALKSSL+KYLP+S+A+SEYT+AQYNSSR L GRLNEVWLDVS T+EGCQ
Sbjct: 157 ALKSSLSKYLPESAAVSEYTIAQYNSSRRLLGRLNEVWLDVSGFTTEGCQ 206
BLAST of Csor.00g300390 vs. ExPASy TrEMBL
Match:
A0A6J1DDG8 (heme-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111019773 PE=3 SV=1)
HSP 1 Score: 290 bits (743), Expect = 7.34e-98
Identity = 140/170 (82.35%), Postives = 155/170 (91.18%), Query Frame = 0
Query: 2 NEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIM 61
++FEIRQY+QVSW+SALVQGTASFEKSTQQGFHRLYQYIHGANSNSS ++TSPVTTTI
Sbjct: 36 SDFEIRQYRQVSWMSALVQGTASFEKSTQQGFHRLYQYIHGANSNSSRLMMTSPVTTTIT 95
Query: 62 ASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVE 121
AST G +RLVRYYLP MY +NPPLPNSEL+VQFEKW SNCLAV RFSGFAKDDNINKE++
Sbjct: 96 ASTHGLDRLVRYYLPVMYAKNPPLPNSELNVQFEKWTSNCLAVRRFSGFAKDDNINKEID 155
Query: 122 ALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQ 171
AL SSL+KYLP S AIS+YT+AQYNSS H SGRLNEVWLDVSA T+EGCQ
Sbjct: 156 ALMSSLSKYLPGSGAISKYTIAQYNSSHHPSGRLNEVWLDVSAFTAEGCQ 205
BLAST of Csor.00g300390 vs. ExPASy TrEMBL
Match:
A0A5A7ST56 (Heme-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001240 PE=3 SV=1)
HSP 1 Score: 287 bits (735), Expect = 1.26e-96
Identity = 135/170 (79.41%), Postives = 156/170 (91.76%), Query Frame = 0
Query: 2 NEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIM 61
++FEIRQYKQ+SW+SALVQGT+SFEKSTQQGFHRLYQY+HGANSNS FL TSPVTTTIM
Sbjct: 37 SDFEIRQYKQISWMSALVQGTSSFEKSTQQGFHRLYQYMHGANSNSYRFLFTSPVTTTIM 96
Query: 62 ASTRGPERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNINKEVE 121
STR PE LVRYYLP+M ENPPLPNSEL++ FEKW++NCLAV RF GFAKDDNINKE++
Sbjct: 97 TSTREPEHLVRYYLPTMNAENPPLPNSELNIHFEKWKNNCLAVRRFPGFAKDDNINKEID 156
Query: 122 ALKSSLNKYLPKSSAISEYTVAQYNSSRHLSGRLNEVWLDVSAVTSEGCQ 171
ALKS+L+K+LP+S+AISEYT+AQYNSSR L GRLNEVWLDVS+ T+EGCQ
Sbjct: 157 ALKSTLSKHLPESAAISEYTIAQYNSSRRLLGRLNEVWLDVSSFTTEGCQ 206
BLAST of Csor.00g300390 vs. TAIR 10
Match:
AT1G17100.1 (SOUL heme-binding family protein )
HSP 1 Score: 94.7 bits (234), Expect = 7.5e-20
Identity = 62/174 (35.63%), Postives = 88/174 (50.57%), Query Frame = 0
Query: 2 NEFEIRQYKQVSWISALVQGTASFEKSTQQGFHRLYQYIHGANSNSSHFLITSPVTTTIM 61
N +EIR+Y W+S S +T+ F +L+ YI G N +T+PV + +
Sbjct: 57 NGYEIRRYNNTVWVSTEPIPDISLVDATRTAFFQLFAYIQGKNEYHQKIEMTAPVISQVS 116
Query: 62 ASTRGP----ERLVRYYLPSMYTENPPLPNSELDVQFEKWRSNCLAVGRFSGFAKDDNIN 121
S GP V +Y+P +N P P ++ +KW S +AV +FSGF DD+I
Sbjct: 117 PSD-GPFCESSFTVSFYVPK---KNQPDPAPSENLHIQKWNSRYVAVRQFSGFVSDDSIG 176
Query: 122 KEVEALKSSLN-----KYLPKS------SAISEYTVAQYNSSRHLSGRLNEVWL 161
++ AL SSL + KS + S YTVAQYNS SGR+NE+WL
Sbjct: 177 EQAAALDSSLKGTAWANAIAKSKEDGGVGSDSAYTVAQYNSPFEFSGRVNEIWL 226
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6573723.1 | 5.44e-122 | 100.00 | Heme-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG7012796.1 | 5.05e-120 | 99.42 | Heme-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023542916.1 | 8.52e-118 | 98.83 | heme-binding protein 2-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022944900.1 | 1.94e-116 | 97.08 | heme-binding protein 2-like [Cucurbita moschata] | [more] |
XP_022967039.1 | 4.05e-116 | 97.66 | heme-binding protein 2-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FZD2 | 9.38e-117 | 97.08 | heme-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111449291 PE=3 S... | [more] |
A0A6J1HVL2 | 1.96e-116 | 97.66 | heme-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466562 PE=3 SV=... | [more] |
A0A0A0KVJ5 | 9.27e-99 | 81.76 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599820 PE=3 SV=1 | [more] |
A0A6J1DDG8 | 7.34e-98 | 82.35 | heme-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111019773 PE=3 ... | [more] |
A0A5A7ST56 | 1.26e-96 | 79.41 | Heme-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
Match Name | E-value | Identity | Description | |
AT1G17100.1 | 7.5e-20 | 35.63 | SOUL heme-binding family protein | [more] |