Csor.00g300320 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGACACGAGGGGAGCAGCGGAGCGGTTTCGATGAGCACGGTGGCTGTTGTAATGGCGTTGCTGCTGCTGACTGGCTTCGAACATGGCGATGCTGCTACAACTTTTGTTGTTGGCGACTCGAACGGATGGAACCTGGGCACGGAAGGATGGCCTAATGGCAAGGTGTTTAGAGCCGGTGACATATTAAGTGAGTTTTCAACTCTCGTTTTGATAGTTGAATAGTAACTGATGTTTTACTTGCGTAATCGTATTTGTTAAGAATGATGCTTTGATACTATGTTAAAAATGAAAAACAGAAGTGGGATCGAAAGTTCGAGAAAAGAGAAAATATTCTACTAACCAAATCCCGAAGATAAGATAAATTATATCAAAACACAAGTCCACTCGTTTTAAAGCCTTGAGGGAAAGCCTGTCGTTACATTACGATTATATAAAATATATTCAAATAGTATCCGATCGATCGAATTCGCAGTTAGATCGTTGATAATAAACTAAACGAATAGATACATTATTTTTTTTTTTTTTTTTTTTTGTAGGATTCAACTATATCCCAACCGTTCACAACGTGGTGGCAGTGGATGAGGGGGGATATAGAAGCTGCATAGCTCCAAGAGGCGCCAAAGTGTTCAATTCAGGCAAGGATGAAATCATGCTCTCAAGAGGACAGAACTTCTTCATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAAATTGCTATCAATTCCCTATAG ATGGCTCGACACGAGGGGAGCAGCGGAGCGGTTTCGATGAGCACGGTGGCTGTTGTAATGGCGTTGCTGCTGCTGACTGGCTTCGAACATGGCGATGCTGCTACAACTTTTGTTGTTGGCGACTCGAACGGATGGAACCTGGGCACGGAAGGATGGCCTAATGGCAAGGTGTTTAGAGCCGGTGACATATTAATGGATGAGGGGGGATATAGAAGCTGCATAGCTCCAAGAGGCGCCAAAGTGTTCAATTCAGGCAAGGATGAAATCATGCTCTCAAGAGGACAGAACTTCTTCATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAAATTGCTATCAATTCCCTATAG ATGGCTCGACACGAGGGGAGCAGCGGAGCGGTTTCGATGAGCACGGTGGCTGTTGTAATGGCGTTGCTGCTGCTGACTGGCTTCGAACATGGCGATGCTGCTACAACTTTTGTTGTTGGCGACTCGAACGGATGGAACCTGGGCACGGAAGGATGGCCTAATGGCAAGGTGTTTAGAGCCGGTGACATATTAATGGATGAGGGGGGATATAGAAGCTGCATAGCTCCAAGAGGCGCCAAAGTGTTCAATTCAGGCAAGGATGAAATCATGCTCTCAAGAGGACAGAACTTCTTCATATGCACCACTCCAGGCCACTGCCAAGCTGGGATGAAAATTGCTATCAATTCCCTATAG MARHEGSSGAVSMSTVAVVMALLLLTGFEHGDAATTFVVGDSNGWNLGTEGWPNGKVFRAGDILMDEGGYRSCIAPRGAKVFNSGKDEIMLSRGQNFFICTTPGHCQAGMKIAINSL Homology
BLAST of Csor.00g300320 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.3e-24 Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.3e-24 Identity = 54/122 (44.26%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2) HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23 Identity = 55/130 (42.31%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy Swiss-Prot
Match: O80517 (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.0e-12 Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10 Identity = 45/116 (38.79%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Csor.00g300320 vs. NCBI nr
Match: KAG6607707.1 (hypothetical protein SDJN03_01049, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244 bits (622), Expect = 2.03e-81 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g300320 vs. NCBI nr
Match: XP_022941118.1 (basic blue protein-like [Cucurbita moschata] >XP_022941139.1 basic blue protein-like [Cucurbita moschata]) HSP 1 Score: 229 bits (584), Expect = 1.96e-75 Identity = 114/130 (87.69%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. NCBI nr
Match: KAG6607683.1 (hypothetical protein SDJN03_01025, partial [Cucurbita argyrosperma subsp. sororia] >KAG6607709.1 hypothetical protein SDJN03_01051, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229 bits (583), Expect = 2.78e-75 Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. NCBI nr
Match: XP_022981647.1 (basic blue protein-like [Cucurbita maxima]) HSP 1 Score: 228 bits (580), Expect = 7.98e-75 Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. NCBI nr
Match: XP_022941126.1 (basic blue protein-like [Cucurbita moschata]) HSP 1 Score: 228 bits (580), Expect = 7.98e-75 Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy TrEMBL
Match: A0A6J1FMC7 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446527 PE=4 SV=1) HSP 1 Score: 229 bits (584), Expect = 9.48e-76 Identity = 114/130 (87.69%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy TrEMBL
Match: A0A6J1IUK3 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480705 PE=4 SV=1) HSP 1 Score: 228 bits (580), Expect = 3.86e-75 Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy TrEMBL
Match: A0A6J1FK99 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446518 PE=4 SV=1) HSP 1 Score: 228 bits (580), Expect = 3.86e-75 Identity = 113/130 (86.92%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy TrEMBL
Match: A0A6J1FK49 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446161 PE=4 SV=1) HSP 1 Score: 227 bits (578), Expect = 7.79e-75 Identity = 113/130 (86.92%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Csor.00g300320 vs. ExPASy TrEMBL
Match: A0A6J1J2N8 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480706 PE=4 SV=1) HSP 1 Score: 224 bits (572), Expect = 6.41e-74 Identity = 112/130 (86.15%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Csor.00g300320 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin ) HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24 Identity = 55/130 (42.31%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of Csor.00g300320 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.2e-14 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of Csor.00g300320 vs. TAIR 10
Match: AT2G44790.1 (uclacyanin 2 ) HSP 1 Score: 72.0 bits (175), Expect = 3.5e-13 Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = 0
BLAST of Csor.00g300320 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein ) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-12 Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0
BLAST of Csor.00g300320 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 ) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11 Identity = 45/116 (38.79%), Postives = 57/116 (49.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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