Csor.00g299100 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGHTKISEDILDDASKYEHFRIVAILTISPCT Homology
BLAST of Csor.00g299100 vs. NCBI nr
Match: KAG6573243.1 (hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182 bits (463), Expect = 4.75e-58 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus]) HSP 1 Score: 114 bits (284), Expect = 1.17e-30 Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (281), Expect = 6.53e-30 Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. NCBI nr
Match: KAG6584014.1 (hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.4 bits (241), Expect = 3.37e-24 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of Csor.00g299100 vs. NCBI nr
Match: CAB4275993.1 (unnamed protein product [Prunus armeniaca] >CAB4306376.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 88.6 bits (218), Expect = 1.36e-20 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1) HSP 1 Score: 114 bits (284), Expect = 5.65e-31 Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 3.16e-30 Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A6J5WX94 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.61e-21 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A314YKP4 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15365 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.33e-20 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: I1MED1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.52e-20 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Csor.00g299100 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05 Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|