Csor.00g299100 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g299100
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionVesicle-trafficking protein like
LocationCsor_Chr18: 2061554 .. 2061823 (+)
RNA-Seq ExpressionCsor.00g299100
SyntenyCsor.00g299100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG

mRNA sequence

ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG

Coding sequence (CDS)

ATGAAACTGAAGGGCAGTATAGGGCTGGCAAGGATGAATGCCTACGGTAAAAGACAATGTATGAGTTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCCATCAAGAATGGAAGCAAGCGGCCACTAAGGTTTCAGTACGATCCTAGTAGCTATGCTCTTAATTTTGATGATGGGCACACCAAAATCAGCGAGGATATTCTTGATGATGCATCCAAATATGAACACTTCAGAATTGTGGCAATCCTTACAATTTCGCCATGTACATAG

Protein sequence

MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGHTKISEDILDDASKYEHFRIVAILTISPCT
Homology
BLAST of Csor.00g299100 vs. NCBI nr
Match: KAG6573243.1 (hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182 bits (463), Expect = 4.75e-58
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH
Sbjct: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60

Query: 61 TKISEDILDDASKYEHFRIVAILTISPCT 89
          TKISEDILDDASKYEHFRIVAILTISPCT
Sbjct: 61 TKISEDILDDASKYEHFRIVAILTISPCT 89

BLAST of Csor.00g299100 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus])

HSP 1 Score: 114 bits (284), Expect = 1.17e-30
Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          MK++GS  L RMNAYGK+QC SLFW+V+AALKKAIKNG+KR L+FQYDPSSYALNFDDGH
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 61 TKISEDILDDASKYE 75
          ++I ED +D A K+E
Sbjct: 61 SEIREDNVD-AYKFE 74

BLAST of Csor.00g299100 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (281), Expect = 6.53e-30
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          MK++GS  L RMNAYGK+QC SLFW+++AALKKAIKNG+KR L+FQYDPSSYALNFDDGH
Sbjct: 24 MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 61 TKISEDILDDASKYE 75
          +KI ED ++ A K+E
Sbjct: 84 SKIREDNVE-AYKFE 97

BLAST of Csor.00g299100 vs. NCBI nr
Match: KAG6584014.1 (hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 3.37e-24
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLR--FQYDPSSYALNFDD 60
          MKL+G   L R NAYGK+QC++LFWRVRAALKKAIKNGS R L+  FQYDPSSYALNFDD
Sbjct: 1  MKLEGGRRLERTNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60

Query: 61 GHTK 62
          G T+
Sbjct: 61 GRTR 64

BLAST of Csor.00g299100 vs. NCBI nr
Match: CAB4275993.1 (unnamed protein product [Prunus armeniaca] >CAB4306376.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 88.6 bits (218), Expect = 1.36e-20
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          M L GS  L  +NAY +RQC SLFWR+RAALKKA+KN  K+ LRFQYDPSSYALNFDDG 
Sbjct: 1  MGLVGS--LVWVNAYSRRQCRSLFWRMRAALKKALKNSGKQQLRFQYDPSSYALNFDDGS 60

Query: 61 TKISEDILDDASKYEH 76
           K +++   +A K +H
Sbjct: 61 WKSAQEA--NALKLKH 72

BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 5.65e-31
Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          MK++GS  L RMNAYGK+QC SLFW+V+AALKKAIKNG+KR L+FQYDPSSYALNFDDGH
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 61 TKISEDILDDASKYE 75
          ++I ED +D A K+E
Sbjct: 61 SEIREDNVD-AYKFE 74

BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 3.16e-30
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          MK++GS  L RMNAYGK+QC SLFW+++AALKKAIKNG+KR L+FQYDPSSYALNFDDGH
Sbjct: 24 MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 61 TKISEDILDDASKYE 75
          +KI ED ++ A K+E
Sbjct: 84 SKIREDNVE-AYKFE 97

BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A6J5WX94 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.61e-21
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          M L GS  L  +NAY +RQC SLFWR+RAALKKA+KN  K+ LRFQYDPSSYALNFDDG 
Sbjct: 1  MGLVGS--LVWVNAYSRRQCRSLFWRMRAALKKALKNSGKQQLRFQYDPSSYALNFDDGS 60

Query: 61 TKISEDILDDASKYEH 76
           K +++   +A K +H
Sbjct: 61 WKSAQEA--NALKLKH 72

BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: A0A314YKP4 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15365 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.33e-20
Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60
          M L GS  L  +NAY ++QC SLFWR+RAALKKA+KN  K+ LRFQYDPSSYALNFDDG 
Sbjct: 1  MGLVGS--LVWVNAYSRKQCRSLFWRMRAALKKALKNSGKKQLRFQYDPSSYALNFDDGS 60

Query: 61 TKISEDILDDASKYEH 76
           K +++   +A K +H
Sbjct: 61 WKSAQEA--NALKLKH 72

BLAST of Csor.00g299100 vs. ExPASy TrEMBL
Match: I1MED1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.52e-20
Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 0

Query: 12 MNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDG 59
          +NAYGK++C SLFWRVRAALKKA+KNG K+ L+FQYDPSSYALNFDDG
Sbjct: 10 VNAYGKKRCRSLFWRVRAALKKALKNGGKQRLKFQYDPSSYALNFDDG 57

BLAST of Csor.00g299100 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0

Query: 12 MNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDG 60
          +N Y K+    +F R++AA+KK  K   K+   FQYDP SYALNFDDG
Sbjct: 10 VNQYRKK----MFRRMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6573243.14.75e-58100.00hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN64641.11.17e-3073.33hypothetical protein Csa_013386 [Cucumis sativus][more]
KAA0056955.16.53e-3072.00putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis me... [more]
KAG6584014.13.37e-2475.00hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sorori... [more]
CAB4275993.11.36e-2061.84unnamed protein product [Prunus armeniaca] >CAB4306376.1 unnamed protein product... [more]
Match NameE-valueIdentityDescription
A0A0A0LXB85.65e-3173.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1[more]
A0A5D3DSE13.16e-3072.00Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis ... [more]
A0A6J5WX946.61e-2161.84Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 S... [more]
A0A314YKP41.33e-2060.53Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_153... [more]
I1MED11.52e-2081.25Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11112.16.0e-0552.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538EXPRESSED PROTEINcoord: 9..66
NoneNo IPR availablePANTHERPTHR34538:SF10OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATEDcoord: 9..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g299100.m01Csor.00g299100.m01mRNA