Csor.00g297390 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g297390
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr18: 3323103 .. 3324091 (+)
RNA-Seq ExpressionCsor.00g297390
SyntenyCsor.00g297390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTAAACCGTGGTCTCGGAGGTGTGGCAAATCCTGCCAGACTGGCATCCGCAGATTCCACTATGCGAATCTGCTGGCCGTTTTCGTCGGATGCATGTTCTCAACGGACGGTCCAGATCTCAACCCCTATTTTAGCGTTACTCTTCCGCTCCTTTTCTCTTCCTCCCCATACCACACTGCCACTCACGACTCCCTCACTTTCCTTCTCCGGTGGCCGCCGTCGTGGTGGTGGAGGTACTTCATTGTCTACAGCGAGAAAGATCGCTGCCGCTTCAGCCGCCACTTCTGCCGATCCTACATTTCCATTTTCCGGTTTGTCACTGTTTTTCTCTTCTCTTAGGTTTCCGTGGCTGTTTGTAGATCTGTGGTTTGTAGGTTGTTTTGTTCTTTCGATTCGTTTGTGGAGTAGCGTCGTGGGCTCTTTTTCTTTGGTTTTCATTTAGTGTGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATGAGTGTTGGAGAACGGATTTTCTGGAATTTCTTCAGATTTACGTTTCTCTCTGTTTCTTTTGTGAATTGTGGAGAAATGCGCTAGGGTTTCCCTACCTGAATCGATGTGGGTTTTCATTTTTTTCTTGGCTTAAACTTTGAGATTATGGCCTTTTGATGCTCTAATACGAACAATTACAGCATGGATTCTTGGTTTTAAGTGTAAAACGTGTAATGTTTCATGTATTTATTTAGAAGAAAACAGGAGCAGATGAATGAATAAAGTTCTCTTTTATTGAGTGAAGTTTCAGTGTGATATCTAAGAGTTACCAATGGAGAAACATGACAAAGTCTGAACTATTTCCTTCTATGCTGCTGCTCCTTAGTGATATCAAATTATTGTAGGCAAAAGTGTCGGTTTCGGTTGCTTCGTTTAATCCTCTAGTTCTTTTTTGCAGCTGCATCTAGGCCAAGATGGTCGCACAGGGATTCACTGTTGATTTGA

mRNA sequence

ATGGCCGTAAACCGTGGTCTCGGAGGTGTGGCAAATCCTGCCAGACTGGCATCCGCAGATTCCACTATGCGAATCTGCTGGCCGTTTTCGTCGGATGCATGTTCTCAACGGACGGTCCAGATCTCAACCCCTATTTTAGCGTTACTCTTCCGCTCCTTTTCTCTTCCTCCCCATACCACACTGCCACTCACGACTCCCTCACTTTCCTTCTCCGGTGGCCGCCGTCGTGGTGGTGGAGGTACTTCATTGTCTACAGCGAGAAAGATCGCTGCCGCTTCAGCCGCCACTTCTGCCGATCCTACATTTCCATTTTCCGCTGCATCTAGGCCAAGATGGTCGCACAGGGATTCACTGTTGATTTGA

Coding sequence (CDS)

ATGGCCGTAAACCGTGGTCTCGGAGGTGTGGCAAATCCTGCCAGACTGGCATCCGCAGATTCCACTATGCGAATCTGCTGGCCGTTTTCGTCGGATGCATGTTCTCAACGGACGGTCCAGATCTCAACCCCTATTTTAGCGTTACTCTTCCGCTCCTTTTCTCTTCCTCCCCATACCACACTGCCACTCACGACTCCCTCACTTTCCTTCTCCGGTGGCCGCCGTCGTGGTGGTGGAGGTACTTCATTGTCTACAGCGAGAAAGATCGCTGCCGCTTCAGCCGCCACTTCTGCCGATCCTACATTTCCATTTTCCGCTGCATCTAGGCCAAGATGGTCGCACAGGGATTCACTGTTGATTTGA

Protein sequence

MAVNRGLGGVANPARLASADSTMRICWPFSSDACSQRTVQISTPILALLFRSFSLPPHTTLPLTTPSLSFSGGRRRGGGGTSLSTARKIAAASAATSADPTFPFSAASRPRWSHRDSLLI
Homology
[Close]
BLAST of Csor.00g297390 vs. NCBI nr
Match: KAG6573413.1 (hypothetical protein SDJN03_27300, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232 bits (591), Expect = 1.36e-76
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MAVNRGLGGVANPARLASADSTMRICWPFSSDACSQRTVQISTPILALLFRSFSLPPHTT 60
           MAVNRGLGGVANPARLASADSTMRICWPFSSDACSQRTVQISTPILALLFRSFSLPPHTT
Sbjct: 1   MAVNRGLGGVANPARLASADSTMRICWPFSSDACSQRTVQISTPILALLFRSFSLPPHTT 60

Query: 61  LPLTTPSLSFSGGRRRGGGGTSLSTARKIAAASAATSADPTFPFSAASRPRWSHRDSLLI 120
           LPLTTPSLSFSGGRRRGGGGTSLSTARKIAAASAATSADPTFPFSAASRPRWSHRDSLLI
Sbjct: 61  LPLTTPSLSFSGGRRRGGGGTSLSTARKIAAASAATSADPTFPFSAASRPRWSHRDSLLI 120

The following BLAST results are available for this feature:
BLAST of Csor.00g297390 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g297390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573413.11.36e-76100.00hypothetical protein SDJN03_27300, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g297390 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g297390 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g297390.m01Csor.00g297390.m01mRNA