Csor.00g296720 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATATCACTGGCCTCGGGGTTGGCCTCGGTGGTAACCAACCCGTTCAGTACTGGGTTCTTCCAGCTGGGGCAGAAGGCGAGCGTGATTGAAGCCTCCACCGCTTGCCCTGGGATGTTCGGCAGTGGAGCCTCCCCTGGGAACACTGGGAAGGTGTTAGTTGACCCTCTCAACGGAGGCGCTTACAATGTGGTTGGGTTAAGGGGCAAGAAGTTCCTTCTTCCTGCTCTTTGGAACCCCAAGACGGCGTCGTGCTGGACTGTCATGTGA ATGGTGATATCACTGGCCTCGGGGTTGGCCTCGGTGGTAACCAACCCGTTCAGTACTGGGTTCTTCCAGCTGGGGCAGAAGGCGAGCGTGATTGAAGCCTCCACCGCTTGCCCTGGGATGTTCGGCAGTGGAGCCTCCCCTGGGAACACTGGGAAGGTGTTAGTTGACCCTCTCAACGGAGGCGCTTACAATGTGGTTGGGTTAAGGGGCAAGAAGTTCCTTCTTCCTGCTCTTTGGAACCCCAAGACGGCGTCGTGCTGGACTGTCATGTGA ATGGTGATATCACTGGCCTCGGGGTTGGCCTCGGTGGTAACCAACCCGTTCAGTACTGGGTTCTTCCAGCTGGGGCAGAAGGCGAGCGTGATTGAAGCCTCCACCGCTTGCCCTGGGATGTTCGGCAGTGGAGCCTCCCCTGGGAACACTGGGAAGGTGTTAGTTGACCCTCTCAACGGAGGCGCTTACAATGTGGTTGGGTTAAGGGGCAAGAAGTTCCTTCTTCCTGCTCTTTGGAACCCCAAGACGGCGTCGTGCTGGACTGTCATGTGA MVISLASGLASVVTNPFSTGFFQLGQKASVIEASTACPGMFGSGASPGNTGKVLVDPLNGGAYNVVGLRGKKFLLPALWNPKTASCWTVM Homology
BLAST of Csor.00g296720 vs. ExPASy Swiss-Prot
Match: Q9FE06 (Protein EXORDIUM-like 2 OS=Arabidopsis thaliana OX=3702 GN=EXL2 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 4.5e-21 Identity = 46/90 (51.11%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy Swiss-Prot
Match: Q9C6E4 (Protein EXORDIUM-like 1 OS=Arabidopsis thaliana OX=3702 GN=EXL1 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20 Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy Swiss-Prot
Match: Q9ZPE7 (Protein EXORDIUM OS=Arabidopsis thaliana OX=3702 GN=EXO PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.5e-20 Identity = 46/90 (51.11%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy Swiss-Prot
Match: Q6Z7W3 (Protein PHOSPHATE-INDUCED 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PHI-1 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.5e-20 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy Swiss-Prot
Match: O82161 (Protein PHOSPHATE-INDUCED 1 OS=Nicotiana tabacum OX=4097 GN=PHI-1 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.6e-18 Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Csor.00g296720 vs. NCBI nr
Match: KAG6588346.1 (Protein EXORDIUM-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (468), Expect = 8.81e-59 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. NCBI nr
Match: KAG6588341.1 (Protein EXORDIUM-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (468), Expect = 8.78e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. NCBI nr
Match: XP_023529978.1 (protein EXORDIUM-like 2 [Cucurbita pepo subsp. pepo] >XP_023530006.1 protein EXORDIUM-like 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184 bits (468), Expect = 9.28e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. NCBI nr
Match: KAG6588342.1 (Protein EXORDIUM-like 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6588344.1 Protein EXORDIUM-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (468), Expect = 9.28e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. NCBI nr
Match: KAG6588334.1 (Protein EXORDIUM-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (468), Expect = 9.28e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy TrEMBL
Match: A0A6J1EI13 (protein EXORDIUM-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111434354 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 4.49e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy TrEMBL
Match: A0A6J1KKC4 (protein EXORDIUM-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111495373 PE=3 SV=1) HSP 1 Score: 179 bits (455), Expect = 1.81e-55 Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy TrEMBL
Match: A0A6J1EI43 (protein EXORDIUM-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111434374 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 2.18e-55 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy TrEMBL
Match: A0A6J1EHR4 (protein EXORDIUM-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111434412 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 2.53e-55 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. ExPASy TrEMBL
Match: A0A6J1ELH0 (protein EXORDIUM-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111434376 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 3.22e-55 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g296720 vs. TAIR 10
Match: AT5G64260.1 (EXORDIUM like 2 ) HSP 1 Score: 101.7 bits (252), Expect = 3.2e-22 Identity = 46/90 (51.11%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Csor.00g296720 vs. TAIR 10
Match: AT1G35140.1 (Phosphate-responsive 1 family protein ) HSP 1 Score: 100.1 bits (248), Expect = 9.3e-22 Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of Csor.00g296720 vs. TAIR 10
Match: AT4G08950.1 (Phosphate-responsive 1 family protein ) HSP 1 Score: 97.4 bits (241), Expect = 6.1e-21 Identity = 46/90 (51.11%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of Csor.00g296720 vs. TAIR 10
Match: AT3G02970.1 (EXORDIUM like 6 ) HSP 1 Score: 85.5 bits (210), Expect = 2.4e-17 Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = 0
BLAST of Csor.00g296720 vs. TAIR 10
Match: AT5G09440.1 (EXORDIUM like 4 ) HSP 1 Score: 84.7 bits (208), Expect = 4.1e-17 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|