Csor.00g296450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTATTGGATTGAATTTAGGCATTAACCTCGGTTTCTTTGATCATCATGGTCGTCCACGTCTAGGGCACCATTGTCATGGAAAATGGGTAGAGATCCCAAATCTTGATTCGCCTTGCATGCAAGAAATTTCAAGATTTGCAGTCGAAGAGTACAACCATCGATATAGGAAAAATTTGACATATCAATTCATATATGCAGCTTGGTATTTGGAAGTTGATGCACGAAGTGTGAAGTACCGTCTCCATATTCAAGTGGTACGCGGCTGTGGACGTATCAAAAGGTACGAAGCTATTGTGCTTGAACGTAACTCTGATTGCGGAAGAGAAAAGATACTTGAATCCTTCAAGCGTGCATGTTGAAGAAGGGATCAAAGTTACTTTTAAAGTCATCATATCTATGTTACTTGTTATGATGTCACATAATAAAATAAAAGGAAGTCTTATAAGTAATCTTCTCCCGTGCCCAAACTATTTGTATCATTAATCAGGTTCTTACATTTCTACCGACATTTCTATTAAATTATACAAATTAATTCACGATGAAACAAAAAAGAATCGAGTTTAACCCTAACTTTATCACACGTGGGCAATTTAAGAGTTGTTTGATTGAACATAAAAATAATAAATAAATAATAATTAAAATACACACATTTTAAAAGGTGTTATCATATTTGATTCTCATATTTTTATAATTAAAGTTAGAATATTGAATGGGGTTTCCTGGTTATTTTGAGAATTTATTTTGGATAAAAAAATATATATATTTCCATCCCTTAATTTTCTTCATAACAAATTTTTATGCAATATAATTTAAAAAATAAATATTTTTCATCTCCTAATTTTCTTTGGACTCAATTATTTATTCGTGTGTTTGATTATAAATTATGAGAAAAATCCCTTCATAAAAATGGATTAGAAGTTTTTAATTATGATGAATGAACCAAGTTGATTCGAGTTATGTATAAAAAGTTATGAAAAAATAGGAAGAATCGATAAATTCGGGGTTTTTGATTGCGTAGGCAAAAGAGATGAACATGGAGGAGACACGTGCAAGCAGCAAGCAGCGCAGCAAGATTGACCTAGCAAGTGACACGCGTCATGTTATGGATGGTGCAACACGTCCGATGTCTCGAGTGATCTGA ATGACTATTGGATTGAATTTAGGCATTAACCTCGGTTTCTTTGATCATCATGGTCGTCCACGTCTAGGGCACCATTGTCATGGAAAATGGGTAGAGATCCCAAATCTTGATTCGCCTTGCATGCAAGAAATTTCAAGATTTGCAGTCGAAGAGTACAACCATCGATATAGGAAAAATTTGACATATCAATTCATATATGCAGCTTGGTATTTGGAAGTTGATGCACGAAGTGTGAAGTACCGTCTCCATATTCAAGTGGCAAAAGAGATGAACATGGAGGAGACACGTGCAAGCAGCAAGCAGCGCAGCAAGATTGACCTAGCAAGTGACACGCGTCATGTTATGGATGGTGCAACACGTCCGATGTCTCGAGTGATCTGA ATGACTATTGGATTGAATTTAGGCATTAACCTCGGTTTCTTTGATCATCATGGTCGTCCACGTCTAGGGCACCATTGTCATGGAAAATGGGTAGAGATCCCAAATCTTGATTCGCCTTGCATGCAAGAAATTTCAAGATTTGCAGTCGAAGAGTACAACCATCGATATAGGAAAAATTTGACATATCAATTCATATATGCAGCTTGGTATTTGGAAGTTGATGCACGAAGTGTGAAGTACCGTCTCCATATTCAAGTGGCAAAAGAGATGAACATGGAGGAGACACGTGCAAGCAGCAAGCAGCGCAGCAAGATTGACCTAGCAAGTGACACGCGTCATGTTATGGATGGTGCAACACGTCCGATGTCTCGAGTGATCTGA MTIGLNLGINLGFFDHHGRPRLGHHCHGKWVEIPNLDSPCMQEISRFAVEEYNHRYRKNLTYQFIYAAWYLEVDARSVKYRLHIQVAKEMNMEETRASSKQRSKIDLASDTRHVMDGATRPMSRVI Homology
BLAST of Csor.00g296450 vs. NCBI nr
Match: KAG6607542.1 (hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 260 bits (665), Expect = 1.09e-87 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g296450 vs. NCBI nr
Match: KAG6607543.1 (hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.2 bits (204), Expect = 1.19e-17 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Csor.00g296450 vs. NCBI nr
Match: XP_023530188.1 (uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 67.8 bits (164), Expect = 2.99e-10 Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Csor.00g296450 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 63.9 bits (154), Expect = 4.01e-10 Identity = 24/61 (39.34%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Csor.00g296450 vs. NCBI nr
Match: KAG6588835.1 (hypothetical protein SDJN03_17400, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.0 bits (162), Expect = 5.58e-10 Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Csor.00g296450 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.70e-10 Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Csor.00g296450 vs. ExPASy TrEMBL
Match: A0A0A0K7B3 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222870 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.31e-08 Identity = 22/58 (37.93%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of Csor.00g296450 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.70e-08 Identity = 23/57 (40.35%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Csor.00g296450 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.72e-08 Identity = 23/57 (40.35%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of Csor.00g296450 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.72e-08 Identity = 23/57 (40.35%), Postives = 42/57 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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