Csor.00g296440 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTATCGGATTGGGATTGGGATTGGGCTTCAACCTTGGTTTTCCTGATCGTCCAAAACCGGATTGCGGTTGTAATGAAAAATGGATACCAATCCAAGATCTCGGTATGGAGTGCTTGCACCAAGTTGCAAAGTTTGCGCTGGAAGAGCACCATAAGAATCATCGGGAAAATTGGGCACTGAAAGGTATATCTGGAGGTTGGTATTTGGAAATCGACGCGTATAGTGTAAAGTACCGTCTCCATATTGAAGTGTCAAGCCGTTTAGGATTTGTGAGAAGGCATGAAGTTATTGTGCTTGAAAAGAGAGTTGAGTGTGGAAGAATCAGGTCACTCGAGTCGTTCAGGCATATATAA ATGTCTATCGGATTGGGATTGGGATTGGGCTTCAACCTTGGTTTTCCTGATCGTCCAAAACCGGATTGCGGTTGTAATGAAAAATGGATACCAATCCAAGATCTCGGTATGGAGTGCTTGCACCAAGTTGCAAAGTTTGCGCTGGAAGAGCACCATAAGAATCATCGGGAAAATTGGGCACTGAAAGGTATATCTGGAGGTTGGTATTTGGAAATCGACGCGTATAGTGTAAAGTACCGTCTCCATATTGAAGTGTCAAGCCGTTTAGGATTTGTGAGAAGGCATGAAGTTATTGTGCTTGAAAAGAGAGTTGAGTGTGGAAGAATCAGGTCACTCGAGTCGTTCAGGCATATATAA ATGTCTATCGGATTGGGATTGGGATTGGGCTTCAACCTTGGTTTTCCTGATCGTCCAAAACCGGATTGCGGTTGTAATGAAAAATGGATACCAATCCAAGATCTCGGTATGGAGTGCTTGCACCAAGTTGCAAAGTTTGCGCTGGAAGAGCACCATAAGAATCATCGGGAAAATTGGGCACTGAAAGGTATATCTGGAGGTTGGTATTTGGAAATCGACGCGTATAGTGTAAAGTACCGTCTCCATATTGAAGTGTCAAGCCGTTTAGGATTTGTGAGAAGGCATGAAGTTATTGTGCTTGAAAAGAGAGTTGAGTGTGGAAGAATCAGGTCACTCGAGTCGTTCAGGCATATATAA MSIGLGLGLGFNLGFPDRPKPDCGCNEKWIPIQDLGMECLHQVAKFALEEHHKNHRENWALKGISGGWYLEIDAYSVKYRLHIEVSSRLGFVRRHEVIVLEKRVECGRIRSLESFRHI Homology
BLAST of Csor.00g296440 vs. NCBI nr
Match: KAG6607543.1 (hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 256 bits (655), Expect = 2.02e-86 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Csor.00g296440 vs. NCBI nr
Match: KAG6607542.1 (hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 88.2 bits (217), Expect = 1.21e-19 Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of Csor.00g296440 vs. NCBI nr
Match: KAG6588756.1 (hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 86.3 bits (212), Expect = 5.73e-19 Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Csor.00g296440 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.2 bits (204), Expect = 9.50e-18 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Csor.00g296440 vs. NCBI nr
Match: KAG6588757.1 (hypothetical protein SDJN03_17322, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.8 bits (203), Expect = 1.34e-17 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of Csor.00g296440 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.73e-16 Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Csor.00g296440 vs. ExPASy TrEMBL
Match: A0A5D3D2J2 (Phloem filament protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001660 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.21e-14 Identity = 34/95 (35.79%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of Csor.00g296440 vs. ExPASy TrEMBL
Match: A0A0A0K7B3 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222870 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.53e-12 Identity = 32/90 (35.56%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Csor.00g296440 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.58e-12 Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of Csor.00g296440 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.58e-12 Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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