Csor.00g296350 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGTTTATATTTGTCTGATAAATATAATCAAGTTCAATTATATACTTCAGCTTCTTAGCTCTCAAGTTAATCTTTGGCCCTTTATTTCCAAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGGTGGCTGGATTGTACATGCTTGTTTGTTTTTTAATTTCATTTTCCGTAAGGTTGGTTCTCCTGATGAATGATATATGCCATGCGTTGTTGTATTGAGCTCAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGTTACTCTCTATTTTCTTTCTGTCTATGTTTCTGTTTACATGTGGGTGTGTATTTATAATTTGATTTTCTTGATATAAGAGAAGGATATGAAGGTGATAATCGAAATTACCTATTTTGCAGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTATGTTTGCTATTCATTCATGTGTTGGCTTTTGTTTCTTTTTACTTTATTTCCACCATAACTAAGCATCCACAGTCGAACGTAGAGGATGGGAGTGGTTCAATTCTGTGAGGAGATTGGGATTTTATCAAGAAACTAAGAGAGCTGATGTACGGATGTTTGTGGTTTATAGGAGTGAATAAGAATTATAATTTTCTCATGGGCATGAGGGAAAGGAGTTAAGACCTCCGGAAGGTGCTGGAGGATATTTTTCATACGAAGTGTCTTGTTTGTTGGAGTCTAAGTCTTGCCTTATGATTTGAAGTAATAGCCTAAGCCCACCACTAGTAGATATGGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCATCTGCCAGGGAGAGGTTTTCACACTCTTATAAAGGGAGTTTCGTTCTCCTCGCCTACTGAGGAAGTGGACCAAATTTGGTTTTTGAGAGAGCTTTTGAGTTTGGTAACTGGTTATGATGGTTGTTCATCATTTTCTATTAACATACTTTGGATTATATTAAAATTAATTGAGAGTTATTTCTGAATTTGACAAGATAGATGTCAACTTGACCATCGATGGAAATTATATTCGTTTCATACCCGAAGGACTTAACTTATTGGAATAGCAACTGTAGAACGATTAATCTTTATTTTATGGGAATGTCAGCTACATATTGAATATTTTCTCATTGACATTCCATCATTGGCACTATTTTTAGCTGTCAACATAGATGATATTAAAAGATGATCCGTAGTTAAGATATAAACCTGGTTTCCACTATTTCAAAAAGAGATAAACGTGTGACAGTGTTAATATTAATAGCAAAGTGATAGAGATATGTACGAGACATTAAGCATAAGTAGTCCGATTAATTGATGCAGGTGGAACAGTTGAATTACAATTTAGATAAATAGTTAAAAGATAAATCTTATGTTTCCCGTTTCTAATATGTTAATGATATAGATTAGCTGCATGCTAATAGTTCTATTAATTTTGAATATTTTAGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGTAACACCATCCTATTTTGAGAAACTATGTCGCATCTCTGCATAATTATTTAATTTCCTTTTATGAAAGTCGGTTTCTTATCGAAAACATTATTTCTTTACTAAATTGTGCTTGAGAAGTCAAATTCTTGGAATATTTAGTGTGTTCATGTTCCTTCCAATTTGTCGGATGTTCCCGAAGGGACAATCTGTTTTCATGTTTTGAAATGTTAACGGTAAATGTCAGCTTGTTGAGAGAGCCAGCTTGGTAATTTTAATTTGTAAGCATCATAATACATAGCTAATTAATTATGTGGCATCCACTTCAAAACTCAATATAGAAGTGGTAACTTATTTTGCTTCTGTAAGTCGTCCTGCATCTCTGGTTCTAACCCTACATGCCAGACTAGAGAAAGGTGGTAGTTGTCTTTTGCAAAACTTTTGGCTGCTTGGCTCAAATTAAATGTCTACAGGTGTTATTGTTCTATTAGTATAGTTATATTTTCCGTAAATATATTAGTTGTCTTGTCCTTTTTTGTCTTTTTACTTTCTCCGACTTAGGGTAAACCTCGTATATAAATCTCTTTAGTGAATGGAATAGAATATTCTAATTCGCTCGAACTTTTAGCATTTACATGATATCAGAGAATTACATCAATTAGTTACTAAAAGAATCTAAGCCAAAAGGACTTTAGACCCCCCATGCTCTCCACTCTCTCCTCCTTTCCAACCCCAATCCTTCATTATTCAAGATAAGTTTCTTCATCTCATTTAGCTATTATTAAGATCAGTTTGTAAGTATGGTGTTGAGTAGTACTTCTGCCATGAAAGAGAGAAGTTGTTGTGTCAATAATAAGTACTTCACAGCCTATGGTTCAAAGATAAGTTTTTTATCAAAGAATGAAGAGCAATTTGTCTATACATACCCTTATCCCATCTTTGTTGGTTTGAAAGTTCACTTGATGATCTTTTGCAACTTCTGATGTCGATGCATTTCTTAAAACAATTCCGAGACAGCAGTGGTACAATCTGTCAGTTGAAACTTTGAGTGCATTATCTGGCTTCCTTCTGGAGGAAGAAAGGATGACTTATTTTCTAGGAGATGATTAAGGACTTTCATGTGTATTATGAAGTTAGCATCAATATTTCGAATCAGACAGCAGCTAAAAAAATCAAGTCTCCTACCAATAGATATGCATGTGTTGCGATGAAGTTCTCATATGGAAAGCAAACAATAAAGCTGGCTCTAAACTGTAACTAGCTTCTACAAGATCTTCACCTCTTTGTGGGAATGAATTTTTGGTTGCAAAAGAAAAGGAAGTGGCTAGTGTTGATTGGAGTTCTTTTATGGTAATATCACGTTTAAATCCCCATGATGATTGAAATGATATCAAAAAGGCAATTGAAAAAAAAAAAAAAGAAAAAATAGGCTACTTTTGTGATAAATCCGTTCATGGCTGATGAGGCTCTTTGCAAATGGAAGATGGCATGCGTTTAGGTGGTTCTTGGGACATAAGGAAAATTGATGAATTGAAATCCTTTTCATATCAAGTTTGAATATTGGTCTTTCAAGAAGCATAGGAAGTCAGAATTTAGGGTGGGTTATGGATGAACTTTCATGATACCAATTGATAATTCGGTGACGATTCATGATAATAGTCGAAAGGTTGATTCCCAAACACTACTCATTGTGCTATTAGTAACCTTCCCACTTATTCTCTCTCTCTCTCTCTGTTCATTATTCCAAGCAAAGTGTACAAAATAGTAGAGAGGCTCTACAAGAAACTTCTCTGACAAGGGAGCAAACTGGGTTGAGTTTTCACCTTGTTATATGGGATAAGCTTCTCCATCCCATTGAAAAATGTCGTCTAGGGTCGTTTCCCTTTGAAGGAAAAGAACAAAGCTTGGACAGCAAAGTGGACTTAAAGATATTATCATGAGAGATGCCCTATGGAGGAAGCTTATATGGTGTAAATATGGGACACTCTCTGCCGCTCCCCATCCATCGACCGTTTCTGCAACAAGACCATGGCAAGCCTTGAAAAGGCAGAAATATTTTGTTGCTAGTTGTATTCGCGACCTTGTAGGCGACAAGGCCCATACTTTGTTTGGGAACGACCTTTGGTTATCGAATATAAGATTGGTAGCAAGTTTCCTCCTCTATAGACTCGCTAGGCGAAAATTGATTACTGTAAAGGAGACCTGAGAACCGGACAGAAGCCTTTGGAACCTTCACTTTGGTAGAAATCTCAAAGATGAAGATGCTTGTGAATGGCCGGAATTGATTAATATGCAGCAGCAGTTTACTCTTTTTCTTGGCAATGAATGGCCAACCCAAATGGGTTTTATACATCAAAATCTCTGTATTGACATATTTTTCATATTTTTGAATAGGGTATCATAAATATATAATGAATTTTGAAATTTACAGGGTATGAAGCCACTGAAGTAG ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAG ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCAATTGCAGCTCTAGCAGTGCAAATTCAATATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGTGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCGCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTCTATTGGATTTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAG MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSNCSSSSANSIWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK Homology
BLAST of Csor.00g296350 vs. ExPASy Swiss-Prot
Match: A7ZE19 (Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) OX=360104 GN=prfB PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.0e-13 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy Swiss-Prot
Match: B1XYX1 (Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) OX=395495 GN=prfA PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13 Identity = 37/78 (47.44%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy Swiss-Prot
Match: A5WFG1 (Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=prfA PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12 Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy Swiss-Prot
Match: A6Q582 (Peptide chain release factor 2 OS=Nitratiruptor sp. (strain SB155-2) OX=387092 GN=prfB PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy Swiss-Prot
Match: B1M766 (Peptide chain release factor 1 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1) OX=426355 GN=prfA PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Csor.00g296350 vs. NCBI nr
Match: KAG6607552.1 (hypothetical protein SDJN03_00894, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037191.1 prfB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 469 bits (1207), Expect = 1.13e-166 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g296350 vs. NCBI nr
Match: XP_023523846.1 (uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468 bits (1205), Expect = 2.28e-166 Identity = 235/237 (99.16%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Csor.00g296350 vs. NCBI nr
Match: XP_022932469.1 (uncharacterized protein LOC111438876 [Cucurbita moschata]) HSP 1 Score: 466 bits (1200), Expect = 1.32e-165 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of Csor.00g296350 vs. NCBI nr
Match: XP_022973451.1 (uncharacterized protein LOC111471993 [Cucurbita maxima]) HSP 1 Score: 461 bits (1185), Expect = 2.55e-163 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of Csor.00g296350 vs. NCBI nr
Match: XP_038891024.1 (peptide chain release factor 1 [Benincasa hispida]) HSP 1 Score: 413 bits (1061), Expect = 2.03e-144 Identity = 208/237 (87.76%), Postives = 218/237 (91.98%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy TrEMBL
Match: A0A6J1EX22 (uncharacterized protein LOC111438876 OS=Cucurbita moschata OX=3662 GN=LOC111438876 PE=4 SV=1) HSP 1 Score: 466 bits (1200), Expect = 6.39e-166 Identity = 235/237 (99.16%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy TrEMBL
Match: A0A6J1I8P1 (uncharacterized protein LOC111471993 OS=Cucurbita maxima OX=3661 GN=LOC111471993 PE=4 SV=1) HSP 1 Score: 461 bits (1185), Expect = 1.24e-163 Identity = 232/237 (97.89%), Postives = 235/237 (99.16%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy TrEMBL
Match: A0A5A7T8S5 (Peptide chain release factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001580 PE=4 SV=1) HSP 1 Score: 392 bits (1008), Expect = 1.30e-136 Identity = 203/240 (84.58%), Postives = 214/240 (89.17%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy TrEMBL
Match: A0A1S3CAA2 (uncharacterized protein LOC103498609 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498609 PE=4 SV=1) HSP 1 Score: 392 bits (1008), Expect = 1.30e-136 Identity = 203/240 (84.58%), Postives = 214/240 (89.17%), Query Frame = 0
BLAST of Csor.00g296350 vs. ExPASy TrEMBL
Match: A0A0A0KUM8 (RF_PROK_I domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G646680 PE=4 SV=1) HSP 1 Score: 390 bits (1001), Expect = 1.52e-135 Identity = 201/240 (83.75%), Postives = 215/240 (89.58%), Query Frame = 0
BLAST of Csor.00g296350 vs. TAIR 10
Match: AT1G33330.1 (Class I peptide chain release factor ) HSP 1 Score: 252.3 bits (643), Expect = 3.9e-67 Identity = 141/242 (58.26%), Postives = 172/242 (71.07%), Query Frame = 0
BLAST of Csor.00g296350 vs. TAIR 10
Match: AT1G56350.1 (Peptide chain release factor 2 ) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11 Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Csor.00g296350 vs. TAIR 10
Match: AT2G47020.1 (Peptide chain release factor 1 ) HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Csor.00g296350 vs. TAIR 10
Match: AT5G36170.1 (high chlorophyll fluorescent 109 ) HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Csor.00g296350 vs. TAIR 10
Match: AT5G36170.2 (high chlorophyll fluorescent 109 ) HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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