Csor.00g296080 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g296080
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Splicing factor YJU2
Location	Csor_Chr13: 5393826 .. 5397993 (+)
RNA-Seq Expression	Csor.00g296080
Synteny	Csor.00g296080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATCAAGGTCCGTATGATGCTTCCGATGAGCATCCGATGCAATACTTGTGGTAATTACATATACAAGGGTACCAAGTTCAATTCTCGCAAGGAGGACGTCGTTGGTGAGGCAAGAGAATGCCTTTGATATTTTTTTCCTTTTGACTTAAAACATAACTTAAAATATGTTTGTTCTTATTACAATTAATTTTTTCATGGTTTTTTTTGCCTTATCTCAGACATATTTGGGAATTCAACTGTTTAGATTCTACTTCAAGTGTACTAGATGTTCTGCTGAACTCACCATCAAGACAGACCCCCAAAACTCAGATTATATTGTAGAGTCAGGAGCCACACGTAATTTTGAACCGTGGCGTGAGGAGGATGAAGTTTCAGAGAAAGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGATGCAATGAAATCTTTGGAGAATAGAACCTTGGATTCTAAACGCGAGATGGACATCCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGGTTTTCTTTTTATTACATTGTTTTGTCATTGAGATTCTTGGTTTGTGCTTTGTTTCTTGGAGCTGTGGCTTTGATTGAGATTCTTCTATTATTAAGTTCAGTTTATTGTTTTAAACAACTTGGTGGGTGTTTGTTTTGCAGTCCAGACACGCAACTGTGAGTATTGATTCAATGCTTTTGGCTTTGCAACAAACTGCTGCAGAAAAGGTATGTATAGCACTGCCTGGAGGAAATCATTTGGACATGAAATATATGAGACGTAGTATTGAAAACAAAAACCTTGGTTCTCCTTTTTCTTGTAGGGCGTCAATTTCACCGTGACTAATTTTAAAATGTTTACTTTGCAGGAAAAGAAGTTAGAAGAAGAGGATGAAGCGTTGATAAAATCAATAGTCTTCAACGTGAGTTTATAGTTTCAAAGTGTTTCTCTTCTTCCATTTACAGTTATTTCTTTTTGTTTACTCCTGTGAGGAATTATGAATTTTCATATACATTTGTCAATATTCCGATGCGCAGAACTCAAACAATTATGTTAAAAGAATTTCAGATGATCAGTTTGATGATAGCAGTCCTTCTGAACAACCTTCAACCAACAAAGACAAAACATCCAACATTAATGCTAAGGTAATAAAATAGCAAGCAAAGCTCCTTTTATTCCATATAAGTAGATTAATAGTGAACATTAATAGTGTGAGTTATACATTTATAAACTGGATTGACCAATCAGGTCCAGTCTCTGTGAATCTCAACTATTTAGCTTCTTCTTAACTTCATGACATAAGAAGCTAGCTGTGCAGTTTTTATTATTCTTTGTAAAATTTGGTTGTGCAGTTTTTGAGAGTCTGAGATGTTTGGCTAATCAAGGGTGAATATGGTGATTAGAAAGAATTTGTTGAAAGCAATTTAGTAAGAATGAGATTAGACTTTAAAGTCTTGAGATCTTATGGCAGCCACTGTGTGTTCTATTTCTCTGTGATATAGTGACATAGTGTACTCTTTTGTGTACTTTTTTTTTTTATAGTTGATTCTTTCTTTTACTGTGGCTTTAATATTCTTTTATGGCTGGATGTTAGTCTTTAAGCCTTCACTGGGGTTAAGGCCAAGTTAATTGGCTAGCTGTGAGACTGTAATTTTTTAAGCTCTTAGTTACTGTTGCTAATGACTTAGATGCTGATTTGTGGCCCCTTTAATAGGGGTCTCTAGATTGTAAGAGATATTATTTATTAAGTTACTGTTGCTAATGACTGCTGATTTGTGGCTCCTTTAATAGCGATCTATAGATTGTAAGAGATATTATTTATTAAATATTTGATTCAAGAATCCTGCAAGATTAGTCTTATGGTAGTTTGATTGGGAACCTAAATGGCTGGAGGAAAGAATTCAGTTGATGCCACCTTCTGTATTGATGTAGCTCGAACTGGTGAAGAGGTTAGTTAATGTCCGCTCCTGAAGATCTATCTTTCAACGTCTCCTTAGAATGGAAGAATCCATGGTAGAGACGAAGAATAGCCAACTTGGTCTTCACCAAATGATGAAGACCTTTACTGAATGGATGGACTTGATGTCCACTCGGCCTTACTATGATCTAGAGCCAAGTGCCCCTTTCAACCTCATGAAACACAAGCAAGAACACATCAAGAACTTTAACCAAAGACGTCCCCTAGAAATGGCAAGAAGACCTTAAGGTTATCCAAGAAACACACTCGTTAAGGTTATCCAAGAAACACACTCGTGCCTCTTCAAATTCAAGACCCAAGTTCTTAGGACTTGATAGTTCTAGCAAGGAAGAAGAGCTTTTTAGAAGAATCTGGAATGTTCAGAACGTCAAAGGTTCAATTCACCAAATTACCCCTACAAAACACTACAGATGCCTCATACAAGCTTCTGACTGATAAGCACCGTTCGCCTTCGACCTTTTTCCATTGGGCATCTTGTGGTGCGTTCGAGTGTTCATGGCAAGCTCCATCCAAAGAAAATGGGGCCTTCTCCTATTGTTGAACGTTTTGGTCTTAGTGCCAACAAAGTTTATCTTCCACCATACTTCAAAATTTCTCCTATTTGTATTATTTTTATGCACAAAGATGCTTTCATCTTCTTTCTTTCTTTCTTTTCTTTTCTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTGCTAATTAACCCTATTTGTAGCATTCAAATTTGTATAAACCTTTCTCATTAGCATTTCTATCTAATTGATTGCAGAAGCAAAAGCTCTCTGAAGAATCTCCACATGATGATCCTACCACTACGACAAAAGATGCTATTCTTCATAGCCTCACGGGTGAAGGTAGCTCCACTTTTCATTTTTAGTCCATCTATTTTTCTAAAGAATAAATCTTGGGTGAATGAAGTGGATGATATGACTACGATACTAAACCTTTAATTGATTTTCTCCTTCTTTCCATATATCAAGCAAGCATATGATACGACTATGATACTAAACCTTTAATTGACTTCCTTTTCTTTCCATATATCAAGATAGCGAACGATTTTGCATCTATTGAACTTTTTGCCACACCTTTTTTTAAGATACTTTGGCATGTGGATTTTAATGCATATTATCTTTTTTTTAGAAATATATATAAAACAATGTATAAGAGCATTAAAAAAAAGGTTAAACACTTGCTGCAAAAAAGGCTAGATAATAGACGGCCATAAGGGCACGTTAAGTCTAGCTACCTCCCAGTACTTTCTCTATAATTTCTTGACTCTCAAGAAAGATACCTACTTTTATAGGTCGATGTTGTTACATTCTTTGTCAGACGACGGAGAAAGACCTTGTCTATAGAGTTGTGACTTAGCTGTGACCGTTTGGAATTCTTTGTTTTTTTTTTCTTTTTATTCTTTAAGGTGCTTGGATTTGCTAGTCACAAAGGTCTTTGGGAAATGATTGAGGTGTTTCCCATCTATCGTTTTGGCCGGTGGTTTTTGTGGCCAGCTAGGATTCGAGGGGTGAGAGGAACAACAGAAGACACCTTTAGAGGACTTGAGAAACCCTAGTGAACATGTAGTAACCTTGTTAGATTCCCTGATTTTCTATAGGTGTTGGTGTAAGAGCCCGAGCCCATTGCTAGCAGATACTGTCCTCTGTGAACTTTCCTTTTTGGGCTTCCCTTCAAGGTTTTTAAAACGCGTATGTTAGGGTTTGTTTCTAAAAAAAAATGGAGAAAGAAAAAGGTTAGAATACGGCCCTTAGAAGCAAATCTTACCTTTAGTCTCCATATTTCTTAATCAATTGATAGCTGGTTACTGCTGCTCGGCAATTATGAAAATAAGTTGGAGGCTTGTAGATTGATGACTTTTAGGTTCTTTTAGATACTTAATGTTGGTAAGTTTATTGACAAATTGAGTGCTCAAATTTTGATGCATTTGCTCTTTTTTGTTGCTTGACAGGAGGGGATGGCAATGGCGCCACATCCAGTGATGCTAAGTTGATTTCTAAATCCTTGTCAATTAAGGTTTCCATTATTAAGAAACCAGAATTGGCTCCTCGGGTGGAGATGAACAATGGACTAGAGTCATTGTGCCAAAACTATGGTAGTGATGAGGATTGA

mRNA sequence

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATCAAGGTCCGTATGATGCTTCCGATGAGCATCCGATGCAATACTTGTGGTAATTACATATACAAGGGTACCAAGTTCAATTCTCGCAAGGAGGACGTCGTTGGTGAGACATATTTGGGAATTCAACTGTTTAGATTCTACTTCAAGTGTACTAGATGTTCTGCTGAACTCACCATCAAGACAGACCCCCAAAACTCAGATTATATTGTAGAGTCAGGAGCCACACGTAATTTTGAACCGTGGCGTGAGGAGGATGAAGTTTCAGAGAAAGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGATGCAATGAAATCTTTGGAGAATAGAACCTTGGATTCTAAACGCGAGATGGACATCCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAACTGTGAGTATTGATTCAATGCTTTTGGCTTTGCAACAAACTGCTGCAGAAAAGGAAAAGAAGTTAGAAGAAGAGGATGAAGCGTTGATAAAATCAATAGTCTTCAACAACTCAAACAATTATGTTAAAAGAATTTCAGATGATCAGTTTGATGATAGCAGTCCTTCTGAACAACCTTCAACCAACAAAGACAAAACATCCAACATTAATGCTAAGAAGCAAAAGCTCTCTGAAGAATCTCCACATGATGATCCTACCACTACGACAAAAGATGCTATTCTTCATAGCCTCACGGGTGAAGGAGGGGATGGCAATGGCGCCACATCCAGTGATGCTAAGTTGATTTCTAAATCCTTGTCAATTAAGGTTTCCATTATTAAGAAACCAGAATTGGCTCCTCGGGTGGAGATGAACAATGGACTAGAGTCATTGTGCCAAAACTATGGTAGTGATGAGGATTGA

Coding sequence (CDS)

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAGCAAATCAAGGTCCGTATGATGCTTCCGATGAGCATCCGATGCAATACTTGTGGTAATTACATATACAAGGGTACCAAGTTCAATTCTCGCAAGGAGGACGTCGTTGGTGAGACATATTTGGGAATTCAACTGTTTAGATTCTACTTCAAGTGTACTAGATGTTCTGCTGAACTCACCATCAAGACAGACCCCCAAAACTCAGATTATATTGTAGAGTCAGGAGCCACACGTAATTTTGAACCGTGGCGTGAGGAGGATGAAGTTTCAGAGAAAGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGATGCAATGAAATCTTTGGAGAATAGAACCTTGGATTCTAAACGCGAGATGGACATCCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCCAGACACGCAACTGTGAGTATTGATTCAATGCTTTTGGCTTTGCAACAAACTGCTGCAGAAAAGGAAAAGAAGTTAGAAGAAGAGGATGAAGCGTTGATAAAATCAATAGTCTTCAACAACTCAAACAATTATGTTAAAAGAATTTCAGATGATCAGTTTGATGATAGCAGTCCTTCTGAACAACCTTCAACCAACAAAGACAAAACATCCAACATTAATGCTAAGAAGCAAAAGCTCTCTGAAGAATCTCCACATGATGATCCTACCACTACGACAAAAGATGCTATTCTTCATAGCCTCACGGGTGAAGGAGGGGATGGCAATGGCGCCACATCCAGTGATGCTAAGTTGATTTCTAAATCCTTGTCAATTAAGGTTTCCATTATTAAGAAACCAGAATTGGCTCCTCGGGTGGAGATGAACAATGGACTAGAGTCATTGTGCCAAAACTATGGTAGTGATGAGGATTGA

Protein sequence

MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTAAEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQKLSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRVEMNNGLESLCQNYGSDED

Homology

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BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot
Match: Q54WR5 (Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.3e-58
Identity = 148/348 (42.53%), Postives = 199/348 (57.18%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKV++KYYPPDFDPSK+ +++  +    KV  MLPMSIRCNTCG YI +GTKFN++K
Sbjct: 1   MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           E V  E YLGI+++RF+ +C +C+AELTIKTDP+NS+Y+ ESGATRN+EPW+E DE    
Sbjct: 61  ETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEEKSN 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
              K   EE  DAM +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q  
Sbjct: 121 RMTKEQEEEQ-DAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSN-------------------NYVKRISDDQFD----D 240
             +EK  +EED+ L+KSI FNN N                   N +KRI +D  D    +
Sbjct: 181 ELEEKLQDEEDDLLVKSI-FNNKNKLELNQINDNNSINNNIDSNKIKRIENDDDDGDKFN 240

Query: 241 SSPSEQPSTNKDKTSNINAKKQKLSEESPHD----DPTTTTKDAILHSLTGEGGDGNGAT 300
           S  S     NK+  +N N     ++  S  +     PTT  K +IL         GN   
Sbjct: 241 SLFSNNNKNNKNIINNNNNNNNNINTTSISNTIETTPTTNQKTSIL---------GN--- 300

Query: 301 SSDAKLISKSLSIKVSIIKKPELAPRVEMN---NGLESLCQNYGSDED 319
                       +KV I K+ E  P+   N   N   S    Y  DE+
Sbjct: 301 -----------KVKVVINKQEEPIPKNNNNSEPNSFSSFMSAYSDDEE 323

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BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot
Match: Q9D6J3 (Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.9e-54
Identity = 107/224 (47.77%), Postives = 154/224 (68.75%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
            + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRMSQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQP 225
            + +++ EEEDE    +++      + + + D + +D +P  +P
Sbjct: 181 EQWQQQQEEEDERETAALL--EEARHRRLLEDSESEDEAPPSRP 222

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BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot
Match: A8WHR3 (Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.9e-54
Identity = 116/254 (45.67%), Postives = 162/254 (63.78%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  +K
Sbjct: 61  ETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQAEKLIEEEEKK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
            + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  + ML   ++  
Sbjct: 121 IQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGMLGQYKELE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
             ++++ +EEDE   K ++       VKR+ D            S ++++  N   + +K
Sbjct: 181 QRQKQREQEEDEQETKEML---ERALVKRLRD------------SDSEEEAENAKERSKK 239

Query: 241 LSEESPHDDPTTTT 255
              + P D  TT T
Sbjct: 241 HIADKPTDILTTDT 239

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BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot
Match: Q9BW85 (Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53
Identity = 115/246 (46.75%), Postives = 165/246 (67.07%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
            + +R  EE+ + MK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSE-QPSTNKDKTSNIN-AKK 240
            E+ ++ +EEDE    +++       +   SD + D+++PS  QP+   + T+ ++ A K
Sbjct: 181 EERRRQQQEEDEQETAALLEEARKRRLLEDSDSE-DEAAPSPLQPALRPNPTAILDEAPK 240

Query: 241 QKLSEE 245
            K   E
Sbjct: 241 PKRKVE 245

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BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot
Match: Q9P7C5 (Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf16 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-45
Identity = 102/226 (45.13%), Postives = 143/226 (63.27%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QIKVRMMLPMSIRCNTCGNYIYKGTK 60
           M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG K
Sbjct: 1   MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60

Query: 61  FNSRKEDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREE- 120
           FN+RKE   GE Y  I + RFY +CTRC+AE+T  TDP+++DY  ESGA+RN+EPW E+ 
Sbjct: 61  FNARKEK-TGEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKR 120

Query: 121 -DEVSEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
             E  E E  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +
Sbjct: 121 LQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAI 180

Query: 181 LALQQTA--------AEKEKKLEEEDEALIKSIVFNNSNNYVKRIS 212
             L++ A        ++K K  EEE +   KS+  +     ++R++
Sbjct: 181 ALLKEDAYGSIEEEESKKRKFEEEEIDREAKSLFSSQDGEIIRRLN 225

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BLAST of Csor.00g296080 vs. NCBI nr
Match: KAG6583657.1 (Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 612 bits (1577), Expect = 2.34e-220
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300

Query: 301 EMNNGLESLCQNYGSDED 318
           EMNNGLESLCQNYGSDED
Sbjct: 301 EMNNGLESLCQNYGSDED 318

[Close]

BLAST of Csor.00g296080 vs. NCBI nr
Match: KAG7011084.1 (Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 600 bits (1548), Expect = 5.51e-216
Identity = 315/318 (99.06%), Postives = 315/318 (99.06%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDV   TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDV---TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300

Query: 301 EMNNGLESLCQNYGSDED 318
           EMNNGLESLCQNYGSDED
Sbjct: 301 EMNNGLESLCQNYGSDED 315

[Close]

BLAST of Csor.00g296080 vs. NCBI nr
Match: XP_022932207.1 (coiled-coil domain-containing protein 94 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 594 bits (1531), Expect = 3.61e-213
Identity = 313/329 (95.14%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATS DAKLISKSLSIKVSIIKKPEL PRV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSGDAKLISKSLSIKVSIIKKPELTPRV 300

Query: 301 EM-----------NNGLESLCQNYGSDED 318
           E            NNGLESLCQNYGSDED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSDED 329

[Close]

BLAST of Csor.00g296080 vs. NCBI nr
Match: XP_023519851.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588 bits (1516), Expect = 6.73e-211
Identity = 311/329 (94.53%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTTTKD ILHS TGEGGDGNGATSSDAKLISKSLSIKVSI+KKPEL+PRV
Sbjct: 241 LSEESPHDDPTTTTKDVILHS-TGEGGDGNGATSSDAKLISKSLSIKVSIVKKPELSPRV 300

Query: 301 EM-----------NNGLESLCQNYGSDED 318
           E            NNGL+SLCQNYGSDED
Sbjct: 301 ETKQKLEVQIGDTNNGLDSLCQNYGSDED 328

[Close]

BLAST of Csor.00g296080 vs. NCBI nr
Match: XP_022970327.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita maxima])

HSP 1 Score: 587 bits (1512), Expect = 2.84e-210
Identity = 309/329 (93.92%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYV+RISDDQFD SSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDQFDGSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTT KD ILHSLTGEGGDGNGATSSDAK ISKSLSIKVSIIKKPEL PRV
Sbjct: 241 LSEESPHDDPTTTPKDVILHSLTGEGGDGNGATSSDAKFISKSLSIKVSIIKKPELTPRV 300

Query: 301 EM-----------NNGLESLCQNYGSDED 318
           E            NNGLESLCQNYGS+ED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSEED 329

[Close]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL
Match: A0A6J1EW00 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1)

HSP 1 Score: 594 bits (1531), Expect = 1.75e-213
Identity = 313/329 (95.14%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATS DAKLISKSLSIKVSIIKKPEL PRV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSGDAKLISKSLSIKVSIIKKPELTPRV 300

Query: 301 EM-----------NNGLESLCQNYGSDED 318
           E            NNGLESLCQNYGSDED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSDED 329

[Close]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL
Match: A0A6J1HYT1 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1)

HSP 1 Score: 587 bits (1512), Expect = 1.38e-210
Identity = 309/329 (93.92%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYV+RISDDQFD SSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDQFDGSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           LSEESPHDDPTTT KD ILHSLTGEGGDGNGATSSDAK ISKSLSIKVSIIKKPEL PRV
Sbjct: 241 LSEESPHDDPTTTPKDVILHSLTGEGGDGNGATSSDAKFISKSLSIKVSIIKKPELTPRV 300

Query: 301 EM-----------NNGLESLCQNYGSDED 318
           E            NNGLESLCQNYGS+ED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSEED 329

[Close]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL
Match: A0A6J1EWD7 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1)

HSP 1 Score: 510 bits (1314), Expect = 2.88e-181
Identity = 265/267 (99.25%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKR+AEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTN DKTSNINAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGG 267
           LSEESPHDDPTTTTKDAILHSLTGEGG
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGG 267

[Close]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL
Match: A0A6J1HNB0 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1)

HSP 1 Score: 509 bits (1311), Expect = 5.70e-180
Identity = 268/329 (81.46%), Postives = 288/329 (87.54%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDV+GETYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDE SEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFNNSNNYV+RISDD+FDD++   Q ST+ D+T +  AKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           +SEE PHD   T+TK A+LH+L GEG DGN  TSS +K +SKSL ++VSIIKKPEL  RV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 E-----------MNNGLESLCQNYGSDED 318
           E            N GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQISDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL
Match: A0A6J1E6Q8 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1)

HSP 1 Score: 508 bits (1307), Expect = 2.32e-179
Identity = 268/329 (81.46%), Postives = 287/329 (87.23%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDV+GETYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDE SEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
           AEKEKKLEEEDEALIKSIVFN SNNYV+RISDD+FDD++   Q STN D+T +  AKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
           +SEE PHD   T+TK A+L++LTGEG DGN  TSS +K +SKSL ++VSIIKKPEL  RV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 E-----------MNNGLESLCQNYGSDED 318
           E            N GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g296080 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 369.8 bits (948), Expect = 2.2e-102
Identity = 212/339 (62.54%), Postives = 247/339 (72.86%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDV+GETYLGIQ+FRFYFKCT+CSAELT+KTDPQNSDYIVESGA+RN+EPWR EDE  +K
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           +K KR+AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T 
Sbjct: 121 DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRIS----DDQFDDSSPSEQPSTNKDK--TSNI 240
           AEK K++EEEDEA+IKSI F      ++RI+    DD +DD    + PS  K+K  +S+ 
Sbjct: 181 AEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKGSSSD 240

Query: 241 NAKKQKLSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKK- 300
            +KK+K +E SP  +PT          LT    +        A       S+ + +IKK 
Sbjct: 241 LSKKRKATEVSP-SNPTDI--------LTSSSAENPKEPKKQAISKQPFKSVHIKVIKKQ 300

Query: 301 --------PELAPRVE------MNNGLESLCQNYGSDED 319
                   P  A   E       N  L SL QNYGSDED
Sbjct: 301 PQPTSSSTPAPAKPEEKKSDGAANTSLASLFQNYGSDED 329

[Close]

BLAST of Csor.00g296080 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 362.8 bits (930), Expect = 2.7e-100
Identity = 212/346 (61.27%), Postives = 247/346 (71.39%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQIKVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVVGE-------TYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWRE 120
           EDV+GE       TYLGIQ+FRFYFKCT+CSAELT+KTDPQNSDYIVESGA+RN+EPWR 
Sbjct: 61  EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120

Query: 121 EDEVSEKEKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
           EDE  +K+K KR+AEEMGDAMKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180

Query: 181 LALQQTAAEKEKKLEEEDEALIKSIVFNNSNNYVKRIS----DDQFDDSSPSEQPSTNKD 240
            ALQ+T AEK K++EEEDEA+IKSI F      ++RI+    DD +DD    + PS  K+
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKE 240

Query: 241 K--TSNINAKKQKLSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIK 300
           K  +S+  +KK+K +E SP  +PT          LT    +        A       S+ 
Sbjct: 241 KKGSSSDLSKKRKATEVSP-SNPTDI--------LTSSSAENPKEPKKQAISKQPFKSVH 300

Query: 301 VSIIKK---------PELAPRVE------MNNGLESLCQNYGSDED 319
           + +IKK         P  A   E       N  L SL QNYGSDED
Sbjct: 301 IKVIKKQPQPTSSSTPAPAKPEEKKSDGAANTSLASLFQNYGSDED 336

[Close]

BLAST of Csor.00g296080 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-63
Identity = 143/318 (44.97%), Postives = 191/318 (60.06%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPP+FDP ++PR+R+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           E+V+GETYLGI++ RFYFKC++C  EL +KTDP+NS Y+ ESGAT  ++   EE++    
Sbjct: 61  ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATCVYDQHEEEEQ---- 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
                 AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +  
Sbjct: 121 ------AEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKKQK 240
            E+E+  +EED ALIKS  F       +RI D++ D     E   T K +   ++ KK K
Sbjct: 181 KEEEEVAKEEDAALIKSTKFGKQ----RRIVDEETD-----EMEKTKKVRMEAVDEKKPK 240

Query: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSSDAKLISKSLSIKVSIIKKPELAPRV 300
                                                   +K L+  +++ KK       
Sbjct: 241 ----------------------------------------TKKLACIITLKKKK------ 253

Query: 301 EMNNGLESLCQNYGSDED 319
             + GL SLC NYG+DE+
Sbjct: 301 TTSLGLASLCHNYGADEE 253

[Close]

BLAST of Csor.00g296080 vs. TAIR 10
Match: AT3G43250.1 (Family of unknown function (DUF572) )

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-57
Identity = 123/247 (49.80%), Postives = 173/247 (70.04%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPPDFDP K+ R+++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120
           EDV+ ETYLG+++ RFY KCT+C AELTIKTDP+N  Y VESGA+  +    E+ E  +K
Sbjct: 61  EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLYN-GHEDIEEEKK 120

Query: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180
           +KH+       +A++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +  
Sbjct: 121 KKHE-------NALESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDLSRRK 180

Query: 181 AEKEKKLEEEDEALIKSIVFNN--SNNYVKRISDDQFDDSSPSEQPSTNKDKTSNINAKK 240
            ++E+ +EE  E LIKSI F      +  K+ + + FD+    ++    +D  +     K
Sbjct: 181 KQEEENVEE--ELLIKSIKFGKRIRTDEEKKKNYEAFDEKKKKKKKPKKRDSGTVCIISK 237

Query: 241 QKLSEES 246
           +K   ES
Sbjct: 241 KKTGLES 237

[Close]

BLAST of Csor.00g296080 vs. TAIR 10
Match: AT2G29430.1 (Family of unknown function (DUF572) )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 35  MMLPMSIRCNTCGNYIYKGTKFNSRKEDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQ 94
           + LPM ++CN C N + KGTKF SR EDV+GETYLGI++FRF  +CT  S E+  +TDP+
Sbjct: 8   LSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPK 67

Query: 95  NSDYIVESGATRNFEP 111
           N+D+I+ESGATR   P
Sbjct: 68  NADFIIESGATRLLLP 83

The following BLAST results are available for this feature:

BLAST of Csor.00g296080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WR5	4.3e-58	42.53	Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1	[more]
Q9D6J3	2.9e-54	47.77	Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1	[more]
A8WHR3	4.9e-54	45.67	Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1	[more]
Q9BW85	4.2e-53	46.75	Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1	[more]
Q9P7C5	2.4e-45	45.13	Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of Csor.00g296080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583657.1	2.34e-220	100.00	Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7011084.1	5.51e-216	99.06	Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyro...	[more]
XP_022932207.1	3.61e-213	95.14	coiled-coil domain-containing protein 94 homolog isoform X1 [Cucurbita moschata]	[more]
XP_023519851.1	6.73e-211	94.53	coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022970327.1	2.84e-210	93.92	coiled-coil domain-containing protein 94 homolog [Cucurbita maxima]	[more]

BLAST of Csor.00g296080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EW00	1.75e-213	95.14	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1	[more]
A0A6J1HYT1	1.38e-210	93.92	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1	[more]
A0A6J1EWD7	2.88e-181	99.25	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1	[more]
A0A6J1HNB0	5.70e-180	81.46	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1	[more]
A0A6J1E6Q8	2.32e-179	81.46	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1	[more]

BLAST of Csor.00g296080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17130.1	2.2e-102	62.54	Family of unknown function (DUF572)	[more]
AT1G17130.2	2.7e-100	61.27	Family of unknown function (DUF572)	[more]
AT2G32050.1	1.2e-63	44.97	Family of unknown function (DUF572)	[more]
AT3G43250.1	1.7e-57	49.80	Family of unknown function (DUF572)	[more]
AT2G29430.1	1.1e-21	57.89	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..232
None	No IPR available	PANTHER	PTHR12111:SF7	BNAA02G14200D PROTEIN	coord: 1..318
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 9..262 e-value: 8.9E-92 score: 308.2
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 1..318
IPR043701	Splicing factor Yju2	HAMAP	MF_03226	YJU2	coord: 1..317 score: 24.497467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g296080.m01	Csor.00g296080.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0046872	metal ion binding