Csor.00g294820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCAACAGATTAGAAACAAAAGTTGAAGTGCAAAAGCCATCAAGGCTATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTCTTCCGAGCTCACAAAAACAGGTCTTACAGAAGCCGAGCCACTGCTGCCAATCTCCGAGGTAGAGGCCGCAACCTGCGAGTGTTGCGGCCTCTCCGAGGAGTGCACGGCGGAGTACATCAACCGTGTTCGAGGCGAGTTCATGGGGAAGATGGTTTGCGGCCTCTGCGCCGAGGCCGTAAACGAGGAGATGAACAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTATATTACAAAGTAAGGCTTATTGGTGTAATTTCAAGCAGAGGGGTTGGAAAAAGGAGGAATCTTTGAAGGAGCACATGAACGCTTGTGCCAAGTTCAATAGGTTCGGGAGGGTATATCCCGTTCTGTATCAAGCCGAAGCCATTAAAGAAATTCTCAAGAAAAGCTCCACCCGAGGGAAGTCGATTAGCCCTAGAGAAACCCCCGCCGGTCACCGCAACGGTAGAATTGGCCGAACCTCTAGTTGTATTCCAGCCATAACTAGAGATGTCTGTGATCCAACCCTCGTCAAATGA ATGGCTCCCAACAGATTAGAAACAAAAGTTGAAGTGCAAAAGCCATCAAGGCTATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTCTTCCGAGCTCACAAAAACAGGTCTTACAGAAGCCGAGCCACTGCTGCCAATCTCCGAGGTAGAGGCCGCAACCTGCGAGTGTTGCGGCCTCTCCGAGGAGTGCACGGCGGAGTACATCAACCGTGTTCGAGGCGAGTTCATGGGGAAGATGGTTTGCGGCCTCTGCGCCGAGGCCGTAAACGAGGAGATGAACAAGAGGGGTTGGAAAAAGGAGGAATCTTTGAAGGAGCACATGAACGCTTGTGCCAAGTTCAATAGGTTCGGGAGGGTATATCCCGTTCTGTATCAAGCCGAAGCCATTAAAGAAATTCTCAAGAAAAGCTCCACCCGAGGGAAGTCGATTAGCCCTAGAGAAACCCCCGCCGGTCACCGCAACGGTAGAATTGGCCGAACCTCTAGTTGTATTCCAGCCATAACTAGAGATGTCTGTGATCCAACCCTCGTCAAATGA ATGGCTCCCAACAGATTAGAAACAAAAGTTGAAGTGCAAAAGCCATCAAGGCTATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTCTTCCGAGCTCACAAAAACAGGTCTTACAGAAGCCGAGCCACTGCTGCCAATCTCCGAGGTAGAGGCCGCAACCTGCGAGTGTTGCGGCCTCTCCGAGGAGTGCACGGCGGAGTACATCAACCGTGTTCGAGGCGAGTTCATGGGGAAGATGGTTTGCGGCCTCTGCGCCGAGGCCGTAAACGAGGAGATGAACAAGAGGGGTTGGAAAAAGGAGGAATCTTTGAAGGAGCACATGAACGCTTGTGCCAAGTTCAATAGGTTCGGGAGGGTATATCCCGTTCTGTATCAAGCCGAAGCCATTAAAGAAATTCTCAAGAAAAGCTCCACCCGAGGGAAGTCGATTAGCCCTAGAGAAACCCCCGCCGGTCACCGCAACGGTAGAATTGGCCGAACCTCTAGTTGTATTCCAGCCATAACTAGAGATGTCTGTGATCCAACCCTCGTCAAATGA MAPNRLETKVEVQKPSRLSMEGLQRTISDISSELTKTGLTEAEPLLPISEVEAATCECCGLSEECTAEYINRVRGEFMGKMVCGLCAEAVNEEMNKRGWKKEESLKEHMNACAKFNRFGRVYPVLYQAEAIKEILKKSSTRGKSISPRETPAGHRNGRIGRTSSCIPAITRDVCDPTLVK Homology
BLAST of Csor.00g294820 vs. NCBI nr
Match: KAG6598770.1 (hypothetical protein SDJN03_08548, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 363 bits (933), Expect = 8.60e-127 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Csor.00g294820 vs. NCBI nr
Match: XP_023547063.1 (uncharacterized protein LOC111805983 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355 bits (912), Expect = 1.37e-123 Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of Csor.00g294820 vs. NCBI nr
Match: XP_022996579.1 (uncharacterized protein LOC111491777 [Cucurbita maxima]) HSP 1 Score: 350 bits (897), Expect = 2.66e-121 Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of Csor.00g294820 vs. NCBI nr
Match: XP_022961690.1 (uncharacterized protein LOC111462383 [Cucurbita moschata]) HSP 1 Score: 314 bits (804), Expect = 2.07e-107 Identity = 153/161 (95.03%), Postives = 155/161 (96.27%), Query Frame = 0
BLAST of Csor.00g294820 vs. NCBI nr
Match: XP_008445002.1 (PREDICTED: uncharacterized protein LOC103488172 isoform X1 [Cucumis melo]) HSP 1 Score: 266 bits (680), Expect = 3.59e-88 Identity = 138/184 (75.00%), Postives = 153/184 (83.15%), Query Frame = 0
BLAST of Csor.00g294820 vs. ExPASy TrEMBL
Match: A0A6J1K942 (uncharacterized protein LOC111491777 OS=Cucurbita maxima OX=3661 GN=LOC111491777 PE=4 SV=1) HSP 1 Score: 350 bits (897), Expect = 1.29e-121 Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 0
BLAST of Csor.00g294820 vs. ExPASy TrEMBL
Match: A0A6J1HD09 (uncharacterized protein LOC111462383 OS=Cucurbita moschata OX=3662 GN=LOC111462383 PE=4 SV=1) HSP 1 Score: 314 bits (804), Expect = 1.00e-107 Identity = 153/161 (95.03%), Postives = 155/161 (96.27%), Query Frame = 0
BLAST of Csor.00g294820 vs. ExPASy TrEMBL
Match: A0A1S3BBP3 (uncharacterized protein LOC103488172 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488172 PE=4 SV=1) HSP 1 Score: 266 bits (680), Expect = 1.74e-88 Identity = 138/184 (75.00%), Postives = 153/184 (83.15%), Query Frame = 0
BLAST of Csor.00g294820 vs. ExPASy TrEMBL
Match: A0A1S4DW91 (uncharacterized protein LOC103488172 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488172 PE=4 SV=1) HSP 1 Score: 261 bits (666), Expect = 2.28e-86 Identity = 138/184 (75.00%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of Csor.00g294820 vs. ExPASy TrEMBL
Match: A0A0A0LLX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373460 PE=4 SV=1) HSP 1 Score: 234 bits (596), Expect = 3.65e-76 Identity = 118/164 (71.95%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of Csor.00g294820 vs. TAIR 10
Match: AT5G25840.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 154.8 bits (390), Expect = 6.4e-38 Identity = 86/178 (48.31%), Postives = 113/178 (63.48%), Query Frame = 0
BLAST of Csor.00g294820 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 151.8 bits (382), Expect = 5.4e-37 Identity = 84/160 (52.50%), Postives = 113/160 (70.62%), Query Frame = 0
BLAST of Csor.00g294820 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 87.8 bits (216), Expect = 9.6e-18 Identity = 40/99 (40.40%), Postives = 64/99 (64.65%), Query Frame = 0
BLAST of Csor.00g294820 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 84.7 bits (208), Expect = 8.1e-17 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Csor.00g294820 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 84.7 bits (208), Expect = 8.1e-17 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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