Csor.00g294770 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCATCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAGTGAGTTCATGTTCTTTGAACTAAAATGTAGAGCTCTGTTTCAAATTCTAAAGTTTTTGGCATCTTGAATTCATCTCTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAGGATGGACATTTCACTTCGCCCCGAGTAA ATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCATCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAGGATGGACATTTCACTTCGCCCCGAGTAA ATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCATCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAGGATGGACATTTCACTTCGCCCCGAGTAA MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLCDDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSRMDISLRPE Homology
BLAST of Csor.00g294770 vs. NCBI nr
Match: KAG6598765.1 (hypothetical protein SDJN03_08543, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 295 bits (754), Expect = 4.69e-100 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g294770 vs. NCBI nr
Match: KAG7029705.1 (hypothetical protein SDJN02_08047 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 293 bits (751), Expect = 1.34e-99 Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g294770 vs. NCBI nr
Match: XP_022961691.1 (uncharacterized protein LOC111462384 [Cucurbita moschata]) HSP 1 Score: 273 bits (697), Expect = 1.80e-91 Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0
BLAST of Csor.00g294770 vs. NCBI nr
Match: XP_023546661.1 (uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546662.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546663.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546664.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546665.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546666.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546667.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (692), Expect = 1.19e-90 Identity = 152/163 (93.25%), Postives = 156/163 (95.71%), Query Frame = 0
BLAST of Csor.00g294770 vs. NCBI nr
Match: XP_022996858.1 (uncharacterized protein LOC111491976 [Cucurbita maxima]) HSP 1 Score: 265 bits (677), Expect = 2.09e-88 Identity = 151/163 (92.64%), Postives = 154/163 (94.48%), Query Frame = 0
BLAST of Csor.00g294770 vs. ExPASy TrEMBL
Match: A0A6J1HB27 (uncharacterized protein LOC111462384 OS=Cucurbita moschata OX=3662 GN=LOC111462384 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 8.73e-92 Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0
BLAST of Csor.00g294770 vs. ExPASy TrEMBL
Match: A0A6J1KC75 (uncharacterized protein LOC111491976 OS=Cucurbita maxima OX=3661 GN=LOC111491976 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 1.01e-88 Identity = 151/163 (92.64%), Postives = 154/163 (94.48%), Query Frame = 0
BLAST of Csor.00g294770 vs. ExPASy TrEMBL
Match: A0A1S3BBN3 (uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 2.50e-48 Identity = 111/169 (65.68%), Postives = 126/169 (74.56%), Query Frame = 0
BLAST of Csor.00g294770 vs. ExPASy TrEMBL
Match: A0A5A7VFF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003850 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 1.01e-47 Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 0
BLAST of Csor.00g294770 vs. ExPASy TrEMBL
Match: A0A1S2Z2J3 (uncharacterized protein LOC101489917 OS=Cicer arietinum OX=3827 GN=LOC101489917 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.45e-14 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Csor.00g294770 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06 Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of Csor.00g294770 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06 Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Csor.00g294770 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04 Identity = 19/37 (51.35%), Postives = 29/37 (78.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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