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Csor.00g294470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATCGATGAAACGCATCCGGAAGTGTCTTCTTATCGCATTCACGAGCGGGTATTTCCTTCATGTGATTGATTTACTGTATGAATGTTTAATGGAAGAAATCCGATCAATTTTCTCTTCTGGATTCTTATTTTTACTTTCTGATAAGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGAAGATAAGGTGTTTGATGAAATGACAATGAAGATTTCTGAGTTTTATGAACCACAAGTTTTTGTAAGTAGCAGTTGGTCAATGAAAACAATTGGGGATCGGTTTTTAATCCAAGGATTTCTTATGAAACAGGCAACATTTGGAAAATTTTCAAGCTCTTGCAGAACTGCAAGCCCCTACGGTAATGAAGATGATGAACAGTCCTGTTTTGACATCACTTAAGTTTGTTGCTGTATAATTACCTTGGATATTTCAACATAACCTCACATGTATAGAACAGTTCATGGTGATTTCTTGCGTGAATTCTAGGGTATGTCGTATTGGATGATAAAAGTCCCACATCAGCTAATTTAGAGAATGATCGTGGGTTTATAATCAAAGAATTCTCTCTCCATTGGTACGAGGGCTTCAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTATTCATCTAACATGTCCATCCAATATCCTCCGATTTCAACCTGAAGAAGCTTTCACGGTTCGTAACGTAGCAAACATCATTCCACCATGGCAGGTATGAAGCATTGTGCTTACATCTTGCATTATCTAAGTCTGAGTGGACTAATTTCAGTATTTGCATTTTATTTCTGATACAGAATGGACCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTAGGCTATTTCCCATTCTTCTTGCTGTCAAATTTGATCTTTATCATCTCTAGGCTGAATATTCTTCTCATTACAGAGTGCATTTATTTGATGAATTCTTAAGAGAACTAGTTTTATGCTCAAGGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGAGCATGGAAGATGATGCTATCAACTCGAGGTTCCACTTTCTTCAACTCCCTTGTATCTTATATGTAACAATCCAAGCCCATCGCTAGCAGATATTGTCTTATTTGAATTTTTCATTTCGGGTTTCCACTCAAGGTTTTTAAAACGTGTCTATTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCGATGTGAGATCTCACAATCTACCCCCCTCAGGGCCTAGCATCCTCGTTGAAGCTTGTTTCCTTCTCCAATTGATGTGAAACCCCCCAAATTCACCCCCTTTCGGGGCTCAGTTTCTTCGCTGGCACATCGTACAGTGTCCACCCCCTTCAGGGCTCAGCATCCTTGTTAGCACACCGCCCGGTGTCTGACTCTAATATCATTTGTAATAGCCCAAATCCACCCATAGCAGAGATTGTTCTCTTTGGACTTTCCTTTTCGAGCTTCCCCTTGAGGTTTTTAAAATGAGTTTCTACAATCTTATAAAGAATGATTCGTTCTCCTTCCCAACCGATCTGGGATCTCACATTATATATCTTTTTTCTGGTATTTGTTCGTTTTTCAAGCGGTAATTTGTAGCATATTCTTATATGGTAGCTTTGTTCATAAGTGGGTGGTGAACGGAAAGGCTGCTAAGTTAAGAACAAAAGCTGCTGCTGCACATCTTCGTTTTGACCAGCAATGTAAGCATTGCGAGAAGGTACTGAGATACTTTCGCTGCAAACATGAACCACACGATCTTTGTTTCAATTTCATTCATCTTCCCCAGTTCATTTTTGAGATTAGAATCTGTTTCTTTCTTTATTAATTCTTTACGTCCCACGTTAGGTTGGAGAGGGGACTAAAACATTCATTATAAGGGTGTGGAAACCCCTTCTTAACAGACGTGTTTTAAAAATTGTAAAGCTGACAGCGATACATAATGAGTCAAAGCGGACAATATTTGCTAGCGGCGACTTGAGTTGTTACAAATGGTTCAGAGTCAGTCACTAAGTGGTGTGCCTGTGAGAACGCTGAACTCCAAGAAGGTGGATTGTGAGATCCAACATCAGTTGGAGAGGGAAACAAAACATTTCTTATAAGAGTGTGGAAACCTCTTCCTAACATACACGTTTTAAAAATCGTGAAGCTGACGATGATATGTAACGAACCAGAGCGGTTAAAAGAGGACAATATCTAATAGCGGTGGGTTTGGGTTGTTAGAGTTGATATCAAAGCTTTTAGTTTATAGATTCGGTAAACTAGCCTACAAGATAGGCTTGGCATGTTACATGGTCTCATCATCGATGCCGTTACCGTCAAATATAACATGCATAACATAAGAAAAAGATTTGGGTCAACTTTTGAAATGAAATAAGGTGAAAAGTGAGGGGAAATATGCTTTTAATTATTCATTTTTGAAGAAAGAAAAAAGGTTTAAAAGTAAATGGAATTGAAGGTGAAGTAATTAAGGCGGTAAGCAAAAATGATTAGATATCATTTAGGCTTTAAACTTTTTAAATTTAATTTTAAAATTTTGAAAACAAGAGATTTTAGATTTAATTAGAAAAAAAAAATATAAATTTAAATAATTGAAATAAAAATGTATATATTAAAAAAAAAAAAAAAAAGCGTAATTGAAAAGGCTCCGTCATGAGTCAAATTCAATAGTCCCTCCCTTTGTTGTTTTTGGATATGGGGGATGTCTCTCTCTCTCTCTAGAAATGGAAAGGCGGTGCCTTCTTTATTTCGCTTCAATCTCAATTCTCGACCTCTTTTTGGTTACCGTGTGACCGACAGTTTTTTTAATTATCAGATAAATACGAGAAATAATAAAAAAGATAAAAATTTATAAATTATATTCTCTAAAATTTAAATATTGGTTTTATATAGAGGCATCGTATAATTCTATAAATTCCAATATGAAAATATTATAAAACTTAGAGCTAAAATTTAAATTAAAAAATTAAATTAGGTTATATAAATCTACCACAAAAAAATAGAGGCTGTTAAGTCAAGATTTTGTGATGGCGGTGGGCCCCATCTCCACCTTCTAAAACAGCGGCGCCACCGCCGCCGCCGCCGCCATCCACCTCTCTCTCGATATAATTTAAAGCCCAATTCTTCCCTTCCACGGCCTCTTTTGCCATTCCACCCTCTCCTCTCTCTCTTTTTTTTTTTTTATTTAATTAAAATATTTCTTTTTTTTATTTTTATTTGATTTTTTGGGGATTTTGAAGAAAAGAAATTAAAGGCTATTTCGCTCACCCCAAGAATCAGACTTCCAACATGTTATCCAAATTTCATCTCAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCGTCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAACGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA ATGAAGAAATCGATGAAACGCATCCGGAAGTGTCTTCTTATCGCATTCACGAGCGGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGAAGATAAGGTGTTTGATGAAATGACAATGAAGATTTCTGAGTTTTATGAACCACAAGTTTTTGCAACATTTGGAAAATTTTCAAGCTCTTGCAGAACTGCAAGCCCCTACGAAGCTTTCACGGTTCGTAACGTAGCAAACATCATTCCACCATGGCAGAATGGACCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGAGCATGGAAGATGATGCTATCAACTCGAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCGTCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAACGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA ATGAAGAAATCGATGAAACGCATCCGGAAGTGTCTTCTTATCGCATTCACGAGCGGGTTGGAGGTCTCGAGGAGCTCATCTGGCATGGAAGTGAAGGATGAAGATAAGGTGTTTGATGAAATGACAATGAAGATTTCTGAGTTTTATGAACCACAAGTTTTTGCAACATTTGGAAAATTTTCAAGCTCTTGCAGAACTGCAAGCCCCTACGAAGCTTTCACGGTTCGTAACGTAGCAAACATCATTCCACCATGGCAGAATGGACCAACTGAAACCAATGCAGGCCTTGAATTTGCAATGAACACATTAAAAGTTGAGAACATTTTAGTCCTTGGCCACAGTAGCTGTGCTGGAATTCAGGGCCTTATGAGCATGGAAGATGATGCTATCAACTCGAGTCGTCACTTTACCCACCCTCCGCCCCATCAACCGGAGGATGAACCTACCGCCGCCGTGCCTTTGCCGTTCAAACCCCTCCCGGAATCAATCTCTGCCGCCGATGATTCCACCATCGAGGTGGTCCGGCGGCCTAGGGGTCGCCCACCGGGCTCCAAAAACAAACCGAAACCGCCTCTCGTCATAACCCGGGAACCCGAACCGACTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAACGACGTCGTTGAAGCTATTTTGCGATTTTGCCGTCAGAAAAATACGGCCCTTTGTGTTCTTAACGGCTCCGGTACCGTTGCTAATGTCTCTCTCCGTCAACCCTCCGCTACCCCTAGCGCCACCGTCACATTTCACGGCTGTTTTGAGATCCTCTCCATTTCCGCCACCGTGTTTCCTGAAACGATGTCGTTTCCTGTCCCTAACGGTTTCACCATCTCCCTCGCTGGACATCAGGGTCAAATCGTCGGCGGTATGGTTGCCGGCGCCTTAATCTCTGCCGGTACAGTTTTCGTCATCGCCTCGTCGTTCAACAATCCGATGTACCTCCGGCTTCCCGAACTGGATGAGCTCAAGAATTCGGAATCCGGCGGCGGCGAAGTTCACTCCCCCCATGTCTCCGTCGCCGGAGATAGTAGCGGGCACCGACCCGGGCAGAGTCGAGGGCGCGGGCAGCTTGTTGAATCCCACGGAATGGCTTTAATGAGTTGCCACGCGCCGTCCGACGTAGTATGGGCGCCGACGGCGAGACAACCGCCACCGCCGCCGTACTAA MKKSMKRIRKCLLIAFTSGLEVSRSSSGMEVKDEDKVFDEMTMKISEFYEPQVFATFGKFSSSCRTASPYEAFTVRNVANIIPPWQNGPTETNAGLEFAMNTLKVENILVLGHSSCAGIQGLMSMEDDAINSSRHFTHPPPHQPEDEPTAAVPLPFKPLPESISAADDSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPTMRPYVLEVPGGNDVVEAILRFCRQKNTALCVLNGSGTVANVSLRQPSATPSATVTFHGCFEILSISATVFPETMSFPVPNGFTISLAGHQGQIVGGMVAGALISAGTVFVIASSFNNPMYLRLPELDELKNSESGGGEVHSPHVSVAGDSSGHRPGQSRGRGQLVESHGMALMSCHAPSDVVWAPTARQPPPPPY Homology
BLAST of Csor.00g294470 vs. ExPASy Swiss-Prot
Match: Q9LTA2 (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 1.7e-67 Identity = 150/272 (55.15%), Postives = 187/272 (68.75%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy Swiss-Prot
Match: Q9M9R4 (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.4e-50 Identity = 116/229 (50.66%), Postives = 147/229 (64.19%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.3e-39 Identity = 91/169 (53.85%), Postives = 113/169 (66.86%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.6e-38 Identity = 89/169 (52.66%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37 Identity = 96/224 (42.86%), Postives = 135/224 (60.27%), Query Frame = 0
BLAST of Csor.00g294470 vs. NCBI nr
Match: KAG6598735.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 791 bits (2044), Expect = 6.70e-289 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
BLAST of Csor.00g294470 vs. NCBI nr
Match: KAG7029679.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 531 bits (1367), Expect = 8.75e-188 Identity = 263/264 (99.62%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Csor.00g294470 vs. NCBI nr
Match: XP_022962200.1 (AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata]) HSP 1 Score: 528 bits (1359), Expect = 1.45e-186 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Csor.00g294470 vs. NCBI nr
Match: XP_023546815.1 (AT-hook motif nuclear-localized protein 17-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 519 bits (1336), Expect = 4.59e-183 Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of Csor.00g294470 vs. NCBI nr
Match: XP_022997238.1 (AT-hook motif nuclear-localized protein 28-like [Cucurbita maxima]) HSP 1 Score: 517 bits (1332), Expect = 1.86e-182 Identity = 257/264 (97.35%), Postives = 258/264 (97.73%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy TrEMBL
Match: A0A6J1HED4 (AT-hook motif nuclear-localized protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111462724 PE=4 SV=1) HSP 1 Score: 528 bits (1359), Expect = 7.00e-187 Identity = 262/264 (99.24%), Postives = 262/264 (99.24%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy TrEMBL
Match: A0A6J1KDA5 (AT-hook motif nuclear-localized protein 28-like OS=Cucurbita maxima OX=3661 GN=LOC111492200 PE=4 SV=1) HSP 1 Score: 517 bits (1332), Expect = 9.02e-183 Identity = 257/264 (97.35%), Postives = 258/264 (97.73%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy TrEMBL
Match: A0A5A7VDF8 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004190 PE=4 SV=1) HSP 1 Score: 396 bits (1018), Expect = 9.15e-135 Identity = 204/268 (76.12%), Postives = 222/268 (82.84%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy TrEMBL
Match: A0A1S3BBI9 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103488132 PE=4 SV=1) HSP 1 Score: 396 bits (1018), Expect = 9.15e-135 Identity = 204/268 (76.12%), Postives = 222/268 (82.84%), Query Frame = 0
BLAST of Csor.00g294470 vs. ExPASy TrEMBL
Match: A0A0A0LLT8 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370580 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 9.25e-132 Identity = 202/268 (75.37%), Postives = 220/268 (82.09%), Query Frame = 0
BLAST of Csor.00g294470 vs. TAIR 10
Match: AT5G49700.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 258.1 bits (658), Expect = 1.2e-68 Identity = 150/272 (55.15%), Postives = 187/272 (68.75%), Query Frame = 0
BLAST of Csor.00g294470 vs. TAIR 10
Match: AT1G14490.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 199.9 bits (507), Expect = 3.8e-51 Identity = 116/229 (50.66%), Postives = 147/229 (64.19%), Query Frame = 0
BLAST of Csor.00g294470 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 164.1 bits (414), Expect = 2.3e-40 Identity = 91/169 (53.85%), Postives = 113/169 (66.86%), Query Frame = 0
BLAST of Csor.00g294470 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-39 Identity = 89/169 (52.66%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Csor.00g294470 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 159.1 bits (401), Expect = 7.5e-39 Identity = 96/224 (42.86%), Postives = 135/224 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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