Csor.00g293930 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g293930
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ENTH domain-containing protein
Location	Csor_Chr09: 2283555 .. 2285169 (+)
RNA-Seq Expression	Csor.00g293930
Synteny	Csor.00g293930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGGTGGCTCTACGCTGCCATTCCGGCGTCTTTTTCGCTTCATTATTTTTCACTCACTGAACCACTGTTTTCAGCTTGCTTTTAAACTCCAGCGATTGAAGAATGTTGTTTTTGCTTATTCGAGGCCGTTAACGGATCGGATTCTTATCGTGCAGGTAAGTTTGAAAGCTTAGCGTGTTTTTTGTTTCTCCTTATAAACTGTTCTCAGTTTTTTTTTCCTTAATATGCGATTGCTTAGTGCTAGTTTGTAGCCAATGATTCATGGATTCGAACGAGAACAATGATATATGATGATTTTTCTGTATTTTTTTTTTTTTTTTTTTTTTTTTGCGTGTTCGTTGAATCTTAAGCTTGGGAGGTACTATATCGTGATTGAAGTAGTGAGTTTGGGAGAGCTGTATCGACATAGAACAGTAGAATAGTAGGAGGATTTTGACATATAGAATAGTAGGAGGATTTTGACATATAGAATAGTAGGATGATTTTGATGCGTTGTGCCCTCTAGTGAAGGAGAGTTTTCAGTTGTATTCGGATATTTATGAAGTCTTGGCTCTTTTGCATGATAAGTTCTTTGGTATGGAGCATCCTGACTGTGTCAAGGCATTTGATGCGTATGATATTGCAGGGAAGCCGATTGATGAGCTCTCTGTGTTTTATAATTGGTGTAAAGATGTAGGTGTTGTAAGGTCTTCTGAGTATCTAGAGGTTCGGAGAATTGACTGCAAGGTATTGGAGACATTGGATACGTTTGTTAGGGACAGAGCAAAAAGACCGACGAATCGAGAGAAGGAGCAACGTTTACCTTGTTGAGGATTATTTAGAGGAGTACCCCTTGGTTAATTAAGAGGAAGATCATGAGTTTATGACTAAGGAACACTATCTTCATTGGTATCGGGTCTTTTGAGGAAACCAAAACAAACCAAAAACAAAGCCACGAGAGCTTGCTTATGAAGTAAACAATACCATATCATTGTGGAGGTTTCTGATTCTTAATATGGTATCGGAACTATGCCCTTAACTTAGTCATGCCAATAAAATCCTCAAGTGTCGAACGAAAAAGTTGTGAGCCTCAAAGGGGTACTTTATTCAAGGGCTCTAGAGAAAGAGTTGAGTCTCGATTAAGAAGAGGCTATTCGATAGTAGCTCTGAAGAAGGAGGTTTCAAGGGAGGCTCTATGGTGTACTTTTTTCAAGTAAAAGATTGTTGAGGATTAATGAGAGAAGTAGACCTCACAAATTAAGAGGAATATGATGAACTAATAAGAGGTTTGTGATTCCTGCTTTACCACTGGGGCTGAGGAATATGATGAACTAATAAGAGGTTTGTGATTCCTGCTTTACCTCTGGGAAGAGCCAGTGCCCGATATGAATGAAATAAAAGCTCTACCTCTCCACCTGAAAATGATACTTGAACCTCCTCCTGTGCCCAAACCTGAACAACAATTCGTAGAAGACTGATGCTGTTAGTTCAGATGATCAAGGTCATAGTCGTCTGGCACTGGCTTTGTTTGCTGGCTTAGCAGCTAATGGCACAAATGAATCCTGGGAAGCTTTCCCTTCTTCCAATCGACAGCCAGAAGTAACCCATGGCACGGCAGACGCCTGCTGCTGA

mRNA sequence

ATGTACGGTGGCTCTACGCTGCCATTCCGGCGTCTTTTTCGCTTCATTATTTTTCACTCACTGAACCACTGTTTTCAGCTTGCTTTTAAACTCCAGCGATTGAAGAATGTTGTTTTTGCTTATTCGAGGCCGTTAACGGATCGGATTCTTATCGTGCAGGAGAGTTTTCAGTTGTATTCGGATATTTATGAAGTCTTGGCTCTTTTGCATGATAAGTTCTTTGGTATGGAGCATCCTGACTGTGTCAAGGCATTTGATGCGTATGATATTGCAGGGAAGCCGATTGATGAGCTCTCTGTGTTTTATAATTGGTGTAAAGATGTAGGTGTTGTAAGGTCTTCTGAGTATCTAGAGGTTCGGAGAATTGACTGCAAGAAGACTGATGCTGTTAGTTCAGATGATCAAGGTCATAGTCGTCTGGCACTGGCTTTGTTTGCTGGCTTAGCAGCTAATGGCACAAATGAATCCTGGGAAGCTTTCCCTTCTTCCAATCGACAGCCAGAAGTAACCCATGGCACGGCAGACGCCTGCTGCTGA

Coding sequence (CDS)

ATGTACGGTGGCTCTACGCTGCCATTCCGGCGTCTTTTTCGCTTCATTATTTTTCACTCACTGAACCACTGTTTTCAGCTTGCTTTTAAACTCCAGCGATTGAAGAATGTTGTTTTTGCTTATTCGAGGCCGTTAACGGATCGGATTCTTATCGTGCAGGAGAGTTTTCAGTTGTATTCGGATATTTATGAAGTCTTGGCTCTTTTGCATGATAAGTTCTTTGGTATGGAGCATCCTGACTGTGTCAAGGCATTTGATGCGTATGATATTGCAGGGAAGCCGATTGATGAGCTCTCTGTGTTTTATAATTGGTGTAAAGATGTAGGTGTTGTAAGGTCTTCTGAGTATCTAGAGGTTCGGAGAATTGACTGCAAGAAGACTGATGCTGTTAGTTCAGATGATCAAGGTCATAGTCGTCTGGCACTGGCTTTGTTTGCTGGCTTAGCAGCTAATGGCACAAATGAATCCTGGGAAGCTTTCCCTTCTTCCAATCGACAGCCAGAAGTAACCCATGGCACGGCAGACGCCTGCTGCTGA

Protein sequence

MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRILIVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVRRIDCKKTDAVSSDDQGHSRLALALFAGLAANGTNESWEAFPSSNRQPEVTHGTADACC

Homology

[Close]

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot
Match: Q8S9J8 (Probable clathrin assembly protein At4g32285 OS=Arabidopsis thaliana OX=3702 GN=At4g32285 PE=1 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESF+LY+DI EVLA+L DKFF ME+ DCVKAFDAY  A K IDEL  FY+WCKD GV
Sbjct: 270 VVKESFRLYADICEVLAVLLDKFFDMEYTDCVKAFDAYASAAKQIDELIAFYHWCKDTGV 329

Query: 111 VRSSEYLEVRRIDCK 126
            RSSEY EV+RI  K
Sbjct: 330 ARSSEYPEVQRITSK 344

[Close]

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot
Match: Q8LF20 (Putative clathrin assembly protein At2g25430 OS=Arabidopsis thaliana OX=3702 GN=At2g25430 PE=1 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 61/120 (50.83%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 8   PFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRIL--IVQESFQLYSDIYEV 67
           P R +    IF  + H  +L  +   L+    A +  +    L  +V+ESF+LY+DI EV
Sbjct: 245 PLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICEV 304

Query: 68  LALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVRRIDCK 126
           LA+L DKFF ME+ DCVKAFDAY  A K IDEL  FYNWCK+ GV RSSEY EV+RI  K
Sbjct: 305 LAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQRITSK 364

[Close]

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot
Match: Q9SA65 (Putative clathrin assembly protein At1g03050 OS=Arabidopsis thaliana OX=3702 GN=At1g03050 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.3e-15
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           IV+ESFQ+Y D+ E++ +L ++F  ++ PD +K +D +    K  +EL  FY+WCK++G+
Sbjct: 239 IVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGI 298

Query: 111 VRSSEYLEVRRIDCKKTD 129
            RSSEY E+ +I  KK D
Sbjct: 299 ARSSEYPEIEKITQKKLD 316

[Close]

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot
Match: Q8GX47 (Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana OX=3702 GN=At4g02650 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           IV+ESFQLY +I E++ +L ++F  ++  D +K ++ +    K  DEL  FY WCK++ V
Sbjct: 244 IVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWCKNMAV 303

Query: 111 VRSSEYLEVRRIDCKKTDAVSSDDQGHSRLA 142
            RSSEY E+ +I  KK D +    +  S LA
Sbjct: 304 ARSSEYPELEKITQKKLDLMDEFIRDKSALA 334

[Close]

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot
Match: Q9ZVN6 (Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana OX=3702 GN=AP180 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11
Identity = 32/72 (44.44%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           ++QESF LY DI + LALL D FF +++  C+ AF A   A K  +EL+ FY+  K +G+
Sbjct: 243 VMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSIGI 302

Query: 111 VRSSEYLEVRRI 123
            R+SEY  +++I
Sbjct: 303 GRTSEYPSIQKI 314

[Close]

BLAST of Csor.00g293930 vs. NCBI nr
Match: KAG6591569.1 (putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG6591606.1 putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 366 bits (940), Expect = 6.32e-128
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRILIVQESFQLYS 60
           MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRILIVQESFQLYS
Sbjct: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRILIVQESFQLYS 60

Query: 61  DIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVR 120
           DIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVR
Sbjct: 61  DIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVR 120

Query: 121 RIDCKKTDAVSSDDQGHSRLALALFAGLAANGTNESWEAFPSSNRQPEVTHGTADACC 178
           RIDCKKTDAVSSDDQGHSRLALALFAGLAANGTNESWEAFPSSNRQPEVTHGTADACC
Sbjct: 121 RIDCKKTDAVSSDDQGHSRLALALFAGLAANGTNESWEAFPSSNRQPEVTHGTADACC 178

[Close]

BLAST of Csor.00g293930 vs. NCBI nr
Match: XP_022976220.1 (uncharacterized protein LOC111476675 [Cucurbita maxima])

HSP 1 Score: 133 bits (334), Expect = 1.41e-36
Identity = 78/133 (58.65%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLT-DRILIVQESFQLY 60
           MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKN+VFAYSRPLT DRILIVQ S +L 
Sbjct: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNIVFAYSRPLTTDRILIVQGS-RLM 60

Query: 61  SDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEV 120
           S +                                      F NWCKDVGVVRSSEYLEV
Sbjct: 61  SSL-------------------------------------CFINWCKDVGVVRSSEYLEV 95

Query: 121 RRIDCKKTDAVSS 132
           R IDCK  + + +
Sbjct: 121 RGIDCKVLETLDT 95

[Close]

BLAST of Csor.00g293930 vs. NCBI nr
Match: KYP43422.1 (Putative clathrin assembly protein At2g25430 family [Cajanus cajan])

HSP 1 Score: 136 bits (343), Expect = 9.96e-34
Identity = 88/194 (45.36%), Postives = 97/194 (50.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI EVLA+L DKFF ME+PDCVKAFDAY  A K IDEL  FYNWCKD GV
Sbjct: 260 VVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGV 319

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 320 ARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERQEEAPPVEKVEEEPVPDMNEIKAL 379

[Close]

BLAST of Csor.00g293930 vs. NCBI nr
Match: XP_020238575.1 (putative clathrin assembly protein At2g25430 isoform X1 [Cajanus cajan] >XP_029124515.1 putative clathrin assembly protein At2g25430 isoform X2 [Cajanus cajan])

HSP 1 Score: 136 bits (343), Expect = 1.15e-33
Identity = 88/194 (45.36%), Postives = 97/194 (50.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI EVLA+L DKFF ME+PDCVKAFDAY  A K IDEL  FYNWCKD GV
Sbjct: 289 VVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGV 348

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 349 ARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERQEEAPPVEKVEEEPVPDMNEIKAL 408

[Close]

BLAST of Csor.00g293930 vs. NCBI nr
Match: TKY74736.1 (putative clathrin assembly protein [Spatholobus suberectus])

HSP 1 Score: 132 bits (333), Expect = 2.68e-32
Identity = 85/194 (43.81%), Postives = 97/194 (50.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI +VLA+L DKFF ME+PDCVKAFDAY  A K IDEL  FYNWCKD GV
Sbjct: 281 VVKESFQLYADICDVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGV 340

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 341 ARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPVVEKVEEEPVPDMNEIKAL 400

[Close]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL
Match: A0A6J1IIW0 (uncharacterized protein LOC111476675 OS=Cucurbita maxima OX=3661 GN=LOC111476675 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 6.82e-37
Identity = 78/133 (58.65%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLT-DRILIVQESFQLY 60
           MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKN+VFAYSRPLT DRILIVQ S +L 
Sbjct: 1   MYGGSTLPFRRLFRFIIFHSLNHCFQLAFKLQRLKNIVFAYSRPLTTDRILIVQGS-RLM 60

Query: 61  SDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEV 120
           S +                                      F NWCKDVGVVRSSEYLEV
Sbjct: 61  SSL-------------------------------------CFINWCKDVGVVRSSEYLEV 95

Query: 121 RRIDCKKTDAVSS 132
           R IDCK  + + +
Sbjct: 121 RGIDCKVLETLDT 95

[Close]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL
Match: A0A151RLK9 (Putative clathrin assembly protein At2g25430 family OS=Cajanus cajan OX=3821 GN=KK1_035144 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 4.82e-34
Identity = 88/194 (45.36%), Postives = 97/194 (50.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI EVLA+L DKFF ME+PDCVKAFDAY  A K IDEL  FYNWCKD GV
Sbjct: 260 VVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGV 319

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 320 ARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERQEEAPPVEKVEEEPVPDMNEIKAL 379

[Close]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL
Match: A0A5B6YXL8 (ENTH domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_005850 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 1.66e-32
Identity = 83/197 (42.13%), Postives = 99/197 (50.25%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESF+LY+DI E LA+L D+FF MEH DCVKAFDAY IAGK IDEL  F+NWCKD GV
Sbjct: 258 VVRESFRLYADICEALAVLLDRFFDMEHSDCVKAFDAYAIAGKQIDELVAFFNWCKDTGV 317

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            R+SEY EV++I  K                                             
Sbjct: 318 GRTSEYPEVQKITSKLLETLEEFVRDRSKAIKSPERRVETPPVAQEEEPVVDMNEIKALP 377

[Close]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL
Match: A0A1S3CRD1 (putative clathrin assembly protein At2g25430 OS=Cucumis melo OX=3656 GN=LOC103503830 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 1.77e-32
Identity = 86/195 (44.10%), Postives = 97/195 (49.74%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI EVLA+L DKFF ME+ DC+KAFDAY  A K IDEL  FYNWCKD GV
Sbjct: 280 LVRESFQLYADICEVLAVLLDKFFDMEYSDCMKAFDAYGSAAKQIDELIAFYNWCKDTGV 339

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 340 ARSSEYPEVQRITSKLLETLEEFLRERGKRPKSPEREPPPPAPEEEEPAPDMNEIKALPP 399

[Close]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL
Match: A0A6J1CJV6 (putative clathrin assembly protein At2g25430 OS=Momordica charantia OX=3673 GN=LOC111012282 PE=4 SV=1)

HSP 1 Score: 129 bits (325), Expect = 1.86e-32
Identity = 85/194 (43.81%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESFQLY+DI EVLA+L DKFF ME+ DC+KAFDAY  A K IDEL   YNWCKD GV
Sbjct: 42  LVRESFQLYADICEVLAVLLDKFFDMEYSDCMKAFDAYGSAAKQIDELISLYNWCKDTGV 101

Query: 111 VRSSEYLEVRRIDCK--------------------------------------------- 170
            RSSEY EV+RI  K                                             
Sbjct: 102 ARSSEYPEVQRITSKLLETLEEFLRERGKKPKSPEREPPPPVAQEEEPVPDMNEIKALPP 161

[Close]

BLAST of Csor.00g293930 vs. TAIR 10
Match: AT2G25430.1 (epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related )

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 61/120 (50.83%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 8   PFRRLFRFIIFHSLNHCFQLAFKLQRLKNVVFAYSRPLTDRIL--IVQESFQLYSDIYEV 67
           P R +    IF  + H  +L  +   L+    A +  +    L  +V+ESF+LY+DI EV
Sbjct: 245 PLREMTPERIFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICEV 304

Query: 68  LALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGVVRSSEYLEVRRIDCK 126
           LA+L DKFF ME+ DCVKAFDAY  A K IDEL  FYNWCK+ GV RSSEY EV+RI  K
Sbjct: 305 LAVLLDKFFDMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQRITSK 364

[Close]

BLAST of Csor.00g293930 vs. TAIR 10
Match: AT4G32285.1 (ENTH/ANTH/VHS superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESF+LY+DI EVLA+L DKFF ME+ DCVKAFDAY  A K IDEL  FY+WCKD GV
Sbjct: 270 VVKESFRLYADICEVLAVLLDKFFDMEYTDCVKAFDAYASAAKQIDELIAFYHWCKDTGV 329

Query: 111 VRSSEYLEVRRIDCK 126
            RSSEY EV+RI  K
Sbjct: 330 ARSSEYPEVQRITSK 344

[Close]

BLAST of Csor.00g293930 vs. TAIR 10
Match: AT4G32285.2 (ENTH/ANTH/VHS superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           +V+ESF+LY+DI EVLA+L DKFF ME+ DCVKAFDAY  A K IDEL  FY+WCKD GV
Sbjct: 270 VVKESFRLYADICEVLAVLLDKFFDMEYTDCVKAFDAYASAAKQIDELIAFYHWCKDTGV 329

Query: 111 VRSSEYLEVRRIDCK 126
            RSSEY EV+RI  K
Sbjct: 330 ARSSEYPEVQRITSK 344

[Close]

BLAST of Csor.00g293930 vs. TAIR 10
Match: AT1G03050.1 (ENTH/ANTH/VHS superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-16
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           IV+ESFQ+Y D+ E++ +L ++F  ++ PD +K +D +    K  +EL  FY+WCK++G+
Sbjct: 239 IVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGI 298

Query: 111 VRSSEYLEVRRIDCKKTD 129
            RSSEY E+ +I  KK D
Sbjct: 299 ARSSEYPEIEKITQKKLD 316

[Close]

BLAST of Csor.00g293930 vs. TAIR 10
Match: AT4G02650.1 (ENTH/ANTH/VHS superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 51  IVQESFQLYSDIYEVLALLHDKFFGMEHPDCVKAFDAYDIAGKPIDELSVFYNWCKDVGV 110
           IV+ESFQLY +I E++ +L ++F  ++  D +K ++ +    K  DEL  FY WCK++ V
Sbjct: 244 IVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWCKNMAV 303

Query: 111 VRSSEYLEVRRIDCKKTDAVSSDDQGHSRLA 142
            RSSEY E+ +I  KK D +    +  S LA
Sbjct: 304 ARSSEYPELEKITQKKLDLMDEFIRDKSALA 334

The following BLAST results are available for this feature:

BLAST of Csor.00g293930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9J8	7.3e-23	69.33	Probable clathrin assembly protein At4g32285 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8LF20	7.3e-23	50.83	Putative clathrin assembly protein At2g25430 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SA65	4.3e-15	43.59	Putative clathrin assembly protein At1g03050 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8GX47	4.0e-13	40.66	Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9ZVN6	2.9e-11	44.44	Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana OX=3702 GN=AP180 PE...	[more]

BLAST of Csor.00g293930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591569.1	6.32e-128	100.00	putative clathrin assembly protein, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022976220.1	1.41e-36	58.65	uncharacterized protein LOC111476675 [Cucurbita maxima]	[more]
KYP43422.1	9.96e-34	45.36	Putative clathrin assembly protein At2g25430 family [Cajanus cajan]	[more]
XP_020238575.1	1.15e-33	45.36	putative clathrin assembly protein At2g25430 isoform X1 [Cajanus cajan] >XP_0291...	[more]
TKY74736.1	2.68e-32	43.81	putative clathrin assembly protein [Spatholobus suberectus]	[more]

BLAST of Csor.00g293930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIW0	6.82e-37	58.65	uncharacterized protein LOC111476675 OS=Cucurbita maxima OX=3661 GN=LOC111476675...	[more]
A0A151RLK9	4.82e-34	45.36	Putative clathrin assembly protein At2g25430 family OS=Cajanus cajan OX=3821 GN=...	[more]
A0A5B6YXL8	1.66e-32	42.13	ENTH domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_005850 PE=...	[more]
A0A1S3CRD1	1.77e-32	44.10	putative clathrin assembly protein At2g25430 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A6J1CJV6	1.86e-32	43.81	putative clathrin assembly protein At2g25430 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Csor.00g293930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25430.1	5.2e-24	50.83	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly p...	[more]
AT4G32285.1	5.2e-24	69.33	ENTH/ANTH/VHS superfamily protein	[more]
AT4G32285.2	5.2e-24	69.33	ENTH/ANTH/VHS superfamily protein	[more]
AT1G03050.1	3.1e-16	43.59	ENTH/ANTH/VHS superfamily protein	[more]
AT4G02650.1	2.9e-14	40.66	ENTH/ANTH/VHS superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011417	AP180 N-terminal homology (ANTH) domain	PFAM	PF07651	ANTH	coord: 49..128 e-value: 2.0E-18 score: 66.4
IPR014712	ANTH domain superfamily	GENE3D	1.20.58.150	ANTH domain	coord: 19..141 e-value: 3.9E-17 score: 64.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..178
None	No IPR available	PANTHER	PTHR22951	CLATHRIN ASSEMBLY PROTEIN	coord: 51..125
None	No IPR available	PANTHER	PTHR22951	CLATHRIN ASSEMBLY PROTEIN	coord: 127..165
None	No IPR available	PANTHER	PTHR22951:SF91	ENTH/ANTH/VHS SUPERFAMILY PROTEIN-RELATED	coord: 51..125
None	No IPR available	PANTHER	PTHR22951:SF91	ENTH/ANTH/VHS SUPERFAMILY PROTEIN-RELATED	coord: 127..165
None	No IPR available	SUPERFAMILY	89009	GAT-like domain	coord: 49..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g293930.m01	Csor.00g293930.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
cellular_component	GO:0030136	clathrin-coated vesicle
molecular_function	GO:0005545	1-phosphatidylinositol binding
molecular_function	GO:0030276	clathrin binding
molecular_function	GO:0005543	phospholipid binding