Csor.00g293780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCATTTTGCCAAGAGTCGAACCCAGGTGTATTGCTTGGAAGGCAATTATCCTAATCGTTGGACTACAAATGCTACATGGTGTTTTTATCAATATGTTCATGAAATAGAATCATAGGAAATTATTCAAATGTTTCTTTCAGTTTATTTTAGGAGGTTCTCACTTGGATTTGCGTGTTGCGCAGAATAGTGATCTTCCTTTGGTTAACATCGAAGTCATCTTTCAACCTTAGTAGTCTAACAGATGCCATTGCTAGTGCACTTGGTGTATGCATTTCTATTTCAATTTGTTTACTTAAACTAGATTTTCTCTAAGATTCTTGATTAACATTTACATGTAGGAGGATTGTGAAGGTCTACCTGTTGTTGTTGCTACCACAGCTATTGGACTAGGTGTAAAGGCTTTTACTAAGGTTGGCTCAAATCCTTTGCCTATGAAACTAAGGTTGGCTCATATGTTCTAA ATGTGCATTTTGCCAAGAGTCGAACCCAGAATAGTGATCTTCCTTTGGTTAACATCGAAGTCATCTTTCAACCTTAGTAGTCTAACAGATGCCATTGCTAGTGCACTTGGTGAGGATTGTGAAGGTCTACCTGTTGTTGTTGCTACCACAGCTATTGGACTAGGTGTAAAGGCTTTTACTAAGGTTGGCTCAAATCCTTTGCCTATGAAACTAAGGTTGGCTCATATGTTCTAA ATGTGCATTTTGCCAAGAGTCGAACCCAGAATAGTGATCTTCCTTTGGTTAACATCGAAGTCATCTTTCAACCTTAGTAGTCTAACAGATGCCATTGCTAGTGCACTTGGTGAGGATTGTGAAGGTCTACCTGTTGTTGTTGCTACCACAGCTATTGGACTAGGTGTAAAGGCTTTTACTAAGGTTGGCTCAAATCCTTTGCCTATGAAACTAAGGTTGGCTCATATGTTCTAA MCILPRVEPRIVIFLWLTSKSSFNLSSLTDAIASALGEDCEGLPVVVATTAIGLGVKAFTKVGSNPLPMKLRLAHMF Homology
BLAST of Csor.00g293780 vs. NCBI nr
Match: KAG6571268.1 (hypothetical protein SDJN03_30183, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154 bits (388), Expect = 5.61e-47 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Csor.00g293780 vs. NCBI nr
Match: KAG6583628.1 (hypothetical protein SDJN03_19560, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (258), Expect = 3.34e-27 Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Csor.00g293780 vs. NCBI nr
Match: XP_022979639.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 62.4 bits (150), Expect = 4.20e-09 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of Csor.00g293780 vs. NCBI nr
Match: XP_023527607.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 60.8 bits (146), Expect = 1.47e-08 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Csor.00g293780 vs. NCBI nr
Match: XP_038896514.1 (rhodanese-like domain-containing protein 4, chloroplastic [Benincasa hispida]) HSP 1 Score: 58.9 bits (141), Expect = 6.99e-08 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Csor.00g293780 vs. ExPASy TrEMBL
Match: A0A6J1IX54 (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479309 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.04e-09 Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of Csor.00g293780 vs. ExPASy TrEMBL
Match: A0A6J1E8N1 (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431789 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.64e-08 Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Csor.00g293780 vs. ExPASy TrEMBL
Match: A0A0A0L8L6 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119690 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 8.64e-08 Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Csor.00g293780 vs. ExPASy TrEMBL
Match: A0A5A7TZ61 (Rhodanese-like domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001190 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.62e-07 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Csor.00g293780 vs. ExPASy TrEMBL
Match: A0A1S3AUS3 (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483198 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.62e-07 Identity = 30/49 (61.22%), Postives = 34/49 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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