Csor.00g293260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATTGGGAGATTGAAAGATGAGAATAATGGGCTTGTGTTTAAAGTTGAGGAAGAAAGGGAGAAATGGATGAAGGTTTGTTGTGAGAGGGATGAAATTAAGACTAATTATGATGGATTGCTTGAGGAAATAGGATATTTGAGAAAGAAAATGATTGAAATGGAGAAAAATGAGAGAAGGGCTTTAAAAGAGACAGAGGATTTGAAGGTGAAATGCAAAGAAGTTGTCAGCTGA ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATTGGGAGATTGAAAGATGAGAATAATGGGCTTGTGTTTAAAGTTGAGGAAGAAAGGGAGAAATGGATGAAGGTTTGTTGTGAGAGGGATGAAATTAAGACTAATTATGATGGATTGCTTGAGGAAATAGGATATTTGAGAAAGAAAATGATTGAAATGGAGAAAAATGAGAGAAGGGCTTTAAAAGAGACAGAGGATTTGAAGGTGAAATGCAAAGAAGTTGTCAGCTGA ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTGGAGATTGGGAGATTGAAAGATGAGAATAATGGGCTTGTGTTTAAAGTTGAGGAAGAAAGGGAGAAATGGATGAAGGTTTGTTGTGAGAGGGATGAAATTAAGACTAATTATGATGGATTGCTTGAGGAAATAGGATATTTGAGAAAGAAAATGATTGAAATGGAGAAAAATGAGAGAAGGGCTTTAAAAGAGACAGAGGATTTGAAGGTGAAATGCAAAGAAGTTGTCAGCTGA MDEVGDRICRLVESERLKNVEIGRLKDENNGLVFKVEEEREKWMKVCCERDEIKTNYDGLLEEIGYLRKKMIEMEKNERRALKETEDLKVKCKEVVS Homology
BLAST of Csor.00g293260 vs. NCBI nr
Match: KAG6590400.1 (hypothetical protein SDJN03_15823, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191 bits (486), Expect = 2.63e-61 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g293260 vs. NCBI nr
Match: XP_022971789.1 (uncharacterized protein LOC111470467 [Cucurbita maxima]) HSP 1 Score: 155 bits (392), Expect = 3.07e-45 Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Csor.00g293260 vs. NCBI nr
Match: XP_023524531.1 (uncharacterized protein LOC111788427 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156 bits (394), Expect = 9.91e-45 Identity = 80/95 (84.21%), Postives = 86/95 (90.53%), Query Frame = 0
BLAST of Csor.00g293260 vs. NCBI nr
Match: KAG6571252.1 (hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147 bits (372), Expect = 1.47e-43 Identity = 79/95 (83.16%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Csor.00g293260 vs. NCBI nr
Match: KAG6586283.1 (hypothetical protein SDJN03_19016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (379), Expect = 1.28e-42 Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Csor.00g293260 vs. ExPASy TrEMBL
Match: A0A6J1I9J8 (uncharacterized protein LOC111470467 OS=Cucurbita maxima OX=3661 GN=LOC111470467 PE=4 SV=1) HSP 1 Score: 155 bits (392), Expect = 1.48e-45 Identity = 79/97 (81.44%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Csor.00g293260 vs. ExPASy TrEMBL
Match: A0A6J1I2X9 (protein MNN4-like OS=Cucurbita maxima OX=3661 GN=LOC111470470 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 8.78e-41 Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Csor.00g293260 vs. ExPASy TrEMBL
Match: A0A6J1FD80 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111444320 PE=4 SV=1) HSP 1 Score: 150 bits (379), Expect = 1.53e-40 Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of Csor.00g293260 vs. ExPASy TrEMBL
Match: A0A6J1HKX2 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111465485 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 5.40e-38 Identity = 73/95 (76.84%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Csor.00g293260 vs. ExPASy TrEMBL
Match: A0A5D3D489 (Cingulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00730 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 1.64e-27 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of Csor.00g293260 vs. TAIR 10
Match: AT5G27330.1 (Prefoldin chaperone subunit family protein ) HSP 1 Score: 53.9 bits (128), Expect = 8.3e-08 Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Csor.00g293260 vs. TAIR 10
Match: AT3G05130.1 (BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1); Has 171032 Blast hits to 82560 proteins in 3364 species: Archae - 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365; Plants - 9598; Viruses - 592; Other Eukaryotes - 39097 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 8.6e-05 Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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