Csor.00g293250 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGTTGTGGTGGTAAACGTACTACAATTCTCGACGGCTGACAATACAGCTGAAATGGAGGCAAAATTTAAGTCGTTTTTTGGTAACCTAGACAATGTGAAGGAAAAATTCAAGTCGTGTGTTGAAACCTGCAACGAGGGATGCAATAACCAAGCTTCTTGTCATACTGAGTGTGAGACAAGTTGCGGCAGAAAAGAAGTTTCTGGTACTTTTTTCAATCTCTTTCAATCATTTTAAAAATTCTTTTCAACAAAGAGGTAAGCATTCATTCCTTCAAAGAAAAAAAAAAAAAAAAATTGGGCAAAGTTCGATTTCAAGTTATTTTATTAGTTTGATAAAATTAAATGTTTATAATGAAATTTGATACCTAAATTTAAAGTAACATGATATATTTTCTTTTTTTTTAGTTTTATCTCAAAATTTAAAATTTTTTTAATTTTATTTTTTTTGTTGTATTTATCTTGCAGATGAACTTCACATCAATGTACCGGCACATTGA ATGTGTGTTGTGGTGGTAAACGTACTACAATTCTCGACGGCTGACAATACAGCTGAAATGGAGGCAAAATTTAAGTCGTTTTTTGGTAACCTAGACAATGTGAAGGAAAAATTCAAGTCGTGTGTTGAAACCTGCAACGAGGGATGCAATAACCAAGCTTCTTGTCATACTGAGTGTGAGACAAGTTGCGGCAGAAAAGAAGTTTCTGATGAACTTCACATCAATGTACCGGCACATTGA ATGTGTGTTGTGGTGGTAAACGTACTACAATTCTCGACGGCTGACAATACAGCTGAAATGGAGGCAAAATTTAAGTCGTTTTTTGGTAACCTAGACAATGTGAAGGAAAAATTCAAGTCGTGTGTTGAAACCTGCAACGAGGGATGCAATAACCAAGCTTCTTGTCATACTGAGTGTGAGACAAGTTGCGGCAGAAAAGAAGTTTCTGATGAACTTCACATCAATGTACCGGCACATTGA MCVVVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNEGCNNQASCHTECETSCGRKEVSDELHINVPAH Homology
BLAST of Csor.00g293250 vs. NCBI nr
Match: KAG6590401.1 (hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166 bits (419), Expect = 1.20e-51 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Csor.00g293250 vs. NCBI nr
Match: KAG6590395.1 (hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (365), Expect = 2.50e-43 Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of Csor.00g293250 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (258), Expect = 5.83e-27 Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of Csor.00g293250 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102 bits (255), Expect = 1.67e-26 Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of Csor.00g293250 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.4 bits (228), Expect = 2.05e-22 Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of Csor.00g293250 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.46e-10 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of Csor.00g293250 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.08e-09 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Csor.00g293250 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.08e-09 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Csor.00g293250 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.21e-08 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of Csor.00g293250 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.16e-08 Identity = 35/77 (45.45%), Postives = 44/77 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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