Csor.00g292770 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGGTACATTTTTCGATCTCTTTCCTCATTCATTTTTTAAAGGAAAAAAAAGTTAATTTCATGCCAAATGAAATTCTTATCATGTTTTCAAAAATTGGATAAGTTTGATAAAATTAAATGTTTATAATTGTTAGACGAACACGACTCTCCACAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGCTCTCATGGCTTTGTTTTGGGCTTTCCCAGAAGGCCTCATAACAATGGAGAGAGTATTCTTTATTTATAAATCCATGATCATTTCCTAAATTCTTTCATCATCCAACAATAATGACATTTAGCCCAAATTTTCTTTTTTAATTTAATTTAATTATTTTACTTATTTGCAGATAAATTTAATATCAAATTTCCCAAATGA ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGATAAATTTAATATCAAATTTCCCAAATGA ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGATAAATTTAATATCAAATTTCCCAAATGA MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGCKGNNKCHSDCETNCGKKEVADKFNIKFPK Homology
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181 bits (459), Expect = 1.94e-57 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164 bits (415), Expect = 1.00e-50 Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (266), Expect = 5.11e-28 Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106 bits (265), Expect = 7.26e-28 Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105 bits (263), Expect = 1.46e-27 Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.02e-12 Identity = 40/95 (42.11%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.59e-10 Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 9.87e-10 Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.20e-09 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.20e-09 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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