Csor.00g292770 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g292770
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMajor pollen allergen Ole e 6-like
LocationCsor_Chr10: 8780644 .. 8781685 (+)
RNA-Seq ExpressionCsor.00g292770
SyntenyCsor.00g292770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGGTACATTTTTCGATCTCTTTCCTCATTCATTTTTTAAAGGAAAAAAAAGTTAATTTCATGCCAAATGAAATTCTTATCATGTTTTCAAAAATTGGATAAGTTTGATAAAATTAAATGTTTATAATTGTTAGACGAACACGACTCTCCACAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCCCAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGTGGTATGATATTGTCCACTTTGAGCACAAGCTCTCATGGCTTTGTTTTGGGCTTTCCCAGAAGGCCTCATAACAATGGAGAGAGTATTCTTTATTTATAAATCCATGATCATTTCCTAAATTCTTTCATCATCCAACAATAATGACATTTAGCCCAAATTTTCTTTTTTAATTTAATTTAATTATTTTACTTATTTGCAGATAAATTTAATATCAAATTTCCCAAATGA

mRNA sequence

ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGATAAATTTAATATCAAATTTCCCAAATGA

Coding sequence (CDS)

ATGGGTAAGAAGATGATGACAGTGTTCTTAATATGTGTTCTATTGGTAAATATACTACAATTCTCCACTGCCGACAAAACAACAGCAGAAATGGAGGCAAAAATGAAGTCACTTTTTAGCGACTTTGGAACTGTGAAGGAAAAATTAAAGACATGTATTGAAACCTGCAACAAGGGATGCAAAGGCAATAACAAATGTCATTCTGATTGTGAAACGAATTGCGGCAAAAAAGAAGTTGCTGATAAATTTAATATCAAATTTCCCAAATGA

Protein sequence

MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGCKGNNKCHSDCETNCGKKEVADKFNIKFPK
Homology
BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (459), Expect = 1.94e-57
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60
          MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC
Sbjct: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 KGNNKCHSDCETNCGKKEVADKFNIKFPK 89
          KGNNKCHSDCETNCGKKEVADKFNIKFPK
Sbjct: 61 KGNNKCHSDCETNCGKKEVADKFNIKFPK 89

BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164 bits (415), Expect = 1.00e-50
Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60
          M K+MM VFL+CVLLVN+LQFSTADKTTAEMEAKMKS FSDFGTVKEKLKTCIETCNKGC
Sbjct: 1  MAKRMMAVFLMCVLLVNVLQFSTADKTTAEMEAKMKSFFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 KGNNKCHSDCETNCGKKEVADKFNIKFP 88
          KGNNKCHSDC TNCGKKEVADK+N+K P
Sbjct: 61 KGNNKCHSDCATNCGKKEVADKYNMKMP 88

BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107 bits (266), Expect = 5.11e-28
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60
          M KKMMTV L+CVL+V++LQFSTADK++AEMEAK KS FSDFG+V+   KTC   C+K C
Sbjct: 1  MAKKMMTVVLMCVLIVSVLQFSTADKSSAEMEAKFKSFFSDFGSVEANFKTCSAACHKKC 60

Query: 61 KGNNKCHSDCETNCGKKEVADKFNIKFP 88
            +  C + C+ +CGKKEV +KF IK P
Sbjct: 61 -ADAACRNKCDADCGKKEVENKFKIKIP 87

BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106 bits (265), Expect = 7.26e-28
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60
          M KKMMTV L+CVL+V+ILQFSTADK++AEMEAK KS F+DFG+V+   KTC   C+K C
Sbjct: 1  MAKKMMTVVLMCVLMVSILQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 KGNNKCHSDCETNCGKKEVADKFNIKFP 88
            +  C + C+ +CGKKEV +KF IK P
Sbjct: 61 -ADASCRNKCDADCGKKEVENKFKIKIP 87

BLAST of Csor.00g292770 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105 bits (263), Expect = 1.46e-27
Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60
          M KKMMTV L+CVL+V++LQFSTADK++AEMEAK KS F+DFG+V+   KTC   C+K C
Sbjct: 1  MAKKMMTVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 KGNNKCHSDCETNCGKKEVADKFNIKFP 88
            +  C + C+ +CGKKEV +KF IK P
Sbjct: 61 -ADAACRNKCDADCGKKEVENKFKIKIP 87

BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.02e-12
Identity = 40/95 (42.11%), Postives = 52/95 (54.74%), Query Frame = 0

Query: 1  MGKKMMTVFLIC-VLLVNILQFSTADKTT---AEMEAKMKSLFSDFGTVKEKLKTCIETC 60
          M K    VF +C V++V  LQFS AD T     E+E + K L S+   V  + K+C+ETC
Sbjct: 1  MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61 NKGC----KGNNKCHSDCETNCGKKEVADKFNIKF 87
           K C      N  CHS C+ +C KKEV DK + K 
Sbjct: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 95

BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.59e-10
Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKT--TAEMEAKMKSLFSDFGTVKEKLKTCIETCNK 60
          M KKMM VFL+C+++V  LQF+TA+K    A  EAK  +          K K C  TC K
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDA----------KYKACFVTCEK 60

Query: 61 GC----KGNNKCHSDCETNCGKKEVADKFNI 85
           C     G++ C   C+ +CG KE ADK +I
Sbjct: 61 ECIERGSGHSYCEVKCDEDCGAKEAADKLHI 81

BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.87e-10
Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 1  MGKKMMTVFLIC-VLLVNILQFSTADKTT---AEMEAKMKSLFSDFGTVKEKLKTCIETC 60
          M K    VF +C V++V  LQFS AD T     E+E + K L S+  +V  + K+C+ETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 NKGC----KGNNKCHSDCETNCGKKEVA 80
           K C      N  CHS C+ +C KKEV 
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.20e-09
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKT--TAEMEAKMKSLFSDFGTVKEKLKTCIETCNK 60
          M KKM+ +FL+C+++V  LQF++A+K    A+ EAK  +          K K+C +TC K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDA----------KYKSCFKTCEK 60

Query: 61 GC----KGNNKCHSDCETNCGKKEVADKFNIKF 87
           C     G + C   C+ +C +KEVADK +I+ 
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Csor.00g292770 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.20e-09
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0

Query: 1  MGKKMMTVFLICVLLVNILQFSTADKT--TAEMEAKMKSLFSDFGTVKEKLKTCIETCNK 60
          M KKM+ +FL+C+++V  LQF++A+K    A+ EAK  +          K K+C +TC K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDA----------KYKSCFKTCEK 60

Query: 61 GC----KGNNKCHSDCETNCGKKEVADKFNIKF 87
           C     G + C   C+ +C +KEVADK +I+ 
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6590396.11.94e-57100.00hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590397.11.00e-5088.64hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595589.15.11e-2860.23hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595591.17.26e-2860.23hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595588.11.46e-2759.09hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5A7T3F96.02e-1242.11Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A0A0KDP72.59e-1041.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
A0A5A7SXV79.87e-1042.05Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A5D3BCS22.20e-0937.63Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5302.20e-0937.63major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g292770.m01Csor.00g292770.m01mRNA